RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 KRTAP10-1P60331 282 aa4.73□□□□□ -1.65
MSH6-209ENST00000538136 C6orf99Q4VX62 202 aa4.73□□□□□ -1.65
MSH6-209ENST00000538136 C15orf56Q8N910 161 aa4.73□□□□□ -1.65
MSH6-209ENST00000538136 EPM2AB3EWF7 344 aa4.73□□□□□ -1.65
MSH6-209ENST00000538136 NDUFC2-KCTD14E9PQ53 114 aa4.73□□□□□ -1.65
MSH6-209ENST00000538136 MRPS36P82909 103 aaKnown RBP4.73□□□□□ -1.65
MSH6-209ENST00000538136 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
MSH6-209ENST00000538136 LINC01545Q5VT33 79 aa4.73□□□□□ -1.65
MSH6-209ENST00000538136 NTN5Q8WTR8 489 aaPredicted RBP4.73□□□□□ -1.65
MSH6-209ENST00000538136 C22orf24Q9Y442 160 aa4.73□□□□□ -1.65
MSH6-209ENST00000538136 TRBV10-3A0A0K0K1G6 114 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 ADAMTSL4-AS1Q5T5F5 129 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 E9PLD3 99 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 CIRBP-AS1Q8TBR5 109 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 F8WEM9 126 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 M0R143 59 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 CXCL5P42830 114 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 LINC00528Q8N1L1 170 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 PTH2Q96A98 100 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 YPEL4Q96NS1 127 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 AMELXQ99217 191 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 Q8IZM0 81 aa4.72□□□□□ -1.65
MSH6-209ENST00000538136 LINC00336Q6ZUF6 198 aa4.71□□□□□ -1.66
MSH6-209ENST00000538136 A0A1W2PNN7 141 aa4.71□□□□□ -1.66
MSH6-209ENST00000538136 NPSP0C0P6 89 aa4.71□□□□□ -1.66
MSH6-209ENST00000538136 TRAV12-1A0A0B4J245 112 aa4.71□□□□□ -1.66
MSH6-209ENST00000538136 HERV-K104P63124 156 aa4.71□□□□□ -1.66
MSH6-209ENST00000538136 COPS9Q8WXC6 57 aa4.71□□□□□ -1.66
MSH6-209ENST00000538136 PANO1I0J062 215 aa4.7□□□□□ -1.66
MSH6-209ENST00000538136 FXYD2P54710 66 aa4.7□□□□□ -1.66
MSH6-209ENST00000538136 SERTAD4-AS1Q5TG53 156 aa4.7□□□□□ -1.66
MSH6-209ENST00000538136 RPL37AP61513 92 aaKnown RBP4.7□□□□□ -1.66
MSH6-209ENST00000538136 LINC00167Q96N53 147 aa4.7□□□□□ -1.66
MSH6-209ENST00000538136 MRPL55Q7Z7F7 128 aaKnown RBP4.7□□□□□ -1.66
MSH6-209ENST00000538136 LINC00308Q8TCZ7 52 aa4.7□□□□□ -1.66
MSH6-209ENST00000538136 PRR34Q9NV39 138 aa4.7□□□□□ -1.66
MSH6-209ENST00000538136 CSDC2Q9Y534 153 aaKnown RBP4.7□□□□□ -1.66
MSH6-209ENST00000538136 CLEC2BQ92478 149 aa4.69□□□□□ -1.66
MSH6-209ENST00000538136 C9orf163Q8N9P6 203 aa4.69□□□□□ -1.66
MSH6-209ENST00000538136 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
MSH6-209ENST00000538136 DLEU1O43261 78 aa4.68□□□□□ -1.66
MSH6-209ENST00000538136 EIF4EBP3O60516 100 aaPredicted RBP4.68□□□□□ -1.66
MSH6-209ENST00000538136 DIRC1Q969H9 104 aa4.68□□□□□ -1.66
MSH6-209ENST00000538136 COX8AP10176 69 aa4.68□□□□□ -1.66
MSH6-209ENST00000538136 C3orf22Q8N5N4 141 aa4.68□□□□□ -1.66
MSH6-209ENST00000538136 LINC00474Q9P2X8 69 aa4.68□□□□□ -1.66
MSH6-209ENST00000538136 PLA2G1BP04054 148 aaKnown RBP4.67□□□□□ -1.66
MSH6-209ENST00000538136 PRR4Q16378 134 aa4.67□□□□□ -1.66
MSH6-209ENST00000538136 A0A0G2JQZ4 141 aa4.66□□□□□ -1.66
MSH6-209ENST00000538136 Q6ZR54 194 aa4.66□□□□□ -1.66
MSH6-209ENST00000538136 RNF151Q2KHN1 245 aa4.66□□□□□ -1.66
MSH6-209ENST00000538136 COA6Q5JTJ3 125 aaKnown RBP4.66□□□□□ -1.66
MSH6-209ENST00000538136 SPANXCQ9NY87 97 aa4.66□□□□□ -1.66
MSH6-209ENST00000538136 HSD52Q0P140 79 aa4.66□□□□□ -1.66
MSH6-209ENST00000538136 PRO1854Q9UHT4 67 aa4.66□□□□□ -1.66
MSH6-209ENST00000538136 TRAV23DV6A0A075B6W5 121 aa4.65□□□□□ -1.66
MSH6-209ENST00000538136 C9JAW5 83 aa4.65□□□□□ -1.66
MSH6-209ENST00000538136 COX7BP24311 80 aa4.65□□□□□ -1.66
MSH6-209ENST00000538136 TRBV30A0A0K0K1B3 111 aa4.65□□□□□ -1.67
MSH6-209ENST00000538136 Q5VSD8 79 aa4.65□□□□□ -1.67
MSH6-209ENST00000538136 Q6ZQY7 126 aa4.65□□□□□ -1.67
MSH6-209ENST00000538136 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
MSH6-209ENST00000538136 C2orf48Q96LS8 159 aa4.65□□□□□ -1.67
MSH6-209ENST00000538136 GVQW2A0A096LPI5 108 aaPredicted RBP4.64□□□□□ -1.67
MSH6-209ENST00000538136 REG3GQ6UW15 175 aa4.64□□□□□ -1.67
MSH6-209ENST00000538136 PSORS1C2Q9UIG4 136 aa4.64□□□□□ -1.67
MSH6-209ENST00000538136 M0R378 163 aa4.64□□□□□ -1.67
MSH6-209ENST00000538136 ZNF73O43830 326 aaPredicted RBP4.64□□□□□ -1.67
MSH6-209ENST00000538136 SDIM1Q6ZPB5 146 aa4.64□□□□□ -1.67
MSH6-209ENST00000538136 SPCS1Q9Y6A9 102 aa4.64□□□□□ -1.67
MSH6-209ENST00000538136 RPL28P46779 137 aaKnown RBP4.63□□□□□ -1.67
MSH6-209ENST00000538136 SPACA4Q8TDM5 124 aa4.63□□□□□ -1.67
MSH6-209ENST00000538136 HYDINQ4G0P3 5121 aa4.63□□□□□ -1.67
MSH6-209ENST00000538136 A0A1B0GWB2 263 aa4.63□□□□□ -1.67
MSH6-209ENST00000538136 KIAA0087Q14695 138 aa4.63□□□□□ -1.67
MSH6-209ENST00000538136 C9orf129Q5T035 196 aaKnown RBP4.63□□□□□ -1.67
MSH6-209ENST00000538136 CEND1Q8N111 149 aa4.63□□□□□ -1.67
MSH6-209ENST00000538136 PKIGQ9Y2B9 76 aa4.63□□□□□ -1.67
MSH6-209ENST00000538136 BVES-AS1Q5T3Y7 98 aa4.63□□□□□ -1.67
MSH6-209ENST00000538136 RETNLBQ9BQ08 111 aa4.63□□□□□ -1.67
MSH6-209ENST00000538136 CFC1BP0CG36 223 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 CFC1P0CG37 223 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 COL5A1-AS1Q5SY13 56 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 SOSTDC1Q6X4U4 206 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 ST20-AS1Q8NBB2 130 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 H3BMG7 143 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 SMIM11BQ8TCY0 68 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 ANK2Q01484 3957 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 DEFB116Q30KQ4 102 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 SMCR5Q8TEV8 140 aa4.62□□□□□ -1.67
MSH6-209ENST00000538136 LINC00337Q8N6G1 96 aa4.61□□□□□ -1.67
MSH6-209ENST00000538136 HUWE1Q7Z6Z7 4374 aaKnown RBP4.61□□□□□ -1.67
MSH6-209ENST00000538136 CDK2AP2O75956 126 aa4.61□□□□□ -1.67
MSH6-209ENST00000538136 INAFM2P0DMQ5 153 aa4.61□□□□□ -1.67
MSH6-209ENST00000538136 MOBPQ13875 183 aa4.61□□□□□ -1.67
MSH6-209ENST00000538136 FAM19A3Q7Z5A8 133 aa4.6□□□□□ -1.67
MSH6-209ENST00000538136 PRR26Q8N8Z3 221 aa4.6□□□□□ -1.67
MSH6-209ENST00000538136 SPANXB1Q9NS25 103 aaPredicted RBP4.6□□□□□ -1.67
MSH6-209ENST00000538136 FAM104AQ969W3 186 aa4.6□□□□□ -1.67
MSH6-209ENST00000538136 IGLV5-39A0A0G2JS06 123 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms