RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 IGKV2D-28P01615 120 aa8.54□□□□□ -1.04
UBE3B-206ENST00000536398 LINC00158P58513 81 aa8.54□□□□□ -1.04
UBE3B-206ENST00000536398 PMCHL2Q9BQD1 86 aa8.54□□□□□ -1.04
UBE3B-206ENST00000536398 SMIM13P0DJ93 91 aa8.53□□□□□ -1.04
UBE3B-206ENST00000536398 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
UBE3B-206ENST00000536398 TSPEAR-AS2P59090 65 aa8.52□□□□□ -1.05
UBE3B-206ENST00000536398 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
UBE3B-206ENST00000536398 TMEM238C9JI98 176 aa8.51□□□□□ -1.05
UBE3B-206ENST00000536398 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
UBE3B-206ENST00000536398 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
UBE3B-206ENST00000536398 HSPB8Q9UJY1 196 aa8.51□□□□□ -1.05
UBE3B-206ENST00000536398 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST1H2BBP33778 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST1H2BDP58876 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST1H2BCP62807 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 RPL24P83731 157 aaKnown RBP8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST2H2BEQ16778 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST1H2BHQ93079 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST1H2BNQ99877 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 HIST1H2BMQ99879 126 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
UBE3B-206ENST00000536398 MEIG1Q5JSS6 88 aa8.49□□□□□ -1.05
UBE3B-206ENST00000536398 LEPROTO15243 131 aa8.48□□□□□ -1.05
UBE3B-206ENST00000536398 DPM2O94777 84 aa8.48□□□□□ -1.05
UBE3B-206ENST00000536398 PLNP26678 52 aa8.48□□□□□ -1.05
UBE3B-206ENST00000536398 UBE2AP49459 152 aa8.48□□□□□ -1.05
UBE3B-206ENST00000536398 MIR7-3HGQ8N6C7 128 aa8.48□□□□□ -1.05
UBE3B-206ENST00000536398 TMEM126AQ9H061 195 aa8.48□□□□□ -1.05
UBE3B-206ENST00000536398 ANAPC11Q9NYG5 84 aa8.48□□□□□ -1.05
UBE3B-206ENST00000536398 M0R378 163 aa8.47□□□□□ -1.05
UBE3B-206ENST00000536398 A0A087X002 238 aa8.46□□□□□ -1.06
UBE3B-206ENST00000536398 MYMXA0A1B0GTQ4 84 aa8.46□□□□□ -1.06
UBE3B-206ENST00000536398 ATP6V1G1O75348 118 aa8.46□□□□□ -1.06
UBE3B-206ENST00000536398 IGKCP01834 107 aa8.46□□□□□ -1.06
UBE3B-206ENST00000536398 HERV-K104P63124 156 aa8.46□□□□□ -1.06
UBE3B-206ENST00000536398 PRLHP81277 87 aa8.46□□□□□ -1.06
UBE3B-206ENST00000536398 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.06
UBE3B-206ENST00000536398 BOD1L2Q8IYS8 172 aa8.46□□□□□ -1.06
UBE3B-206ENST00000536398 LPAP08519 4548 aa8.46□□□□□ -1.06
UBE3B-206ENST00000536398 J3QQQ9 107 aa8.45□□□□□ -1.06
UBE3B-206ENST00000536398 DAND5Q8N907 189 aa8.45□□□□□ -1.06
UBE3B-206ENST00000536398 PLEKHB2Q96CS7 222 aa8.45□□□□□ -1.06
UBE3B-206ENST00000536398 MAP1LC3CQ9BXW4 147 aa8.45□□□□□ -1.06
UBE3B-206ENST00000536398 NCR3O14931 201 aa8.44□□□□□ -1.06
UBE3B-206ENST00000536398 RPL13AP40429 203 aaKnown RBP8.43□□□□□ -1.06
UBE3B-206ENST00000536398 SYS1-DBNDD2H3BUS1 97 aa8.42□□□□□ -1.06
UBE3B-206ENST00000536398 HERVK_113P61574 105 aa8.42□□□□□ -1.06
UBE3B-206ENST00000536398 LINC00587B1AMM8 73 aa8.41□□□□□ -1.06
UBE3B-206ENST00000536398 LGALS3P17931 250 aaKnown RBP8.41□□□□□ -1.06
UBE3B-206ENST00000536398 KRTAP13-2Q52LG2 175 aa8.41□□□□□ -1.06
UBE3B-206ENST00000536398 CRYGAP11844 174 aa8.4□□□□□ -1.06
UBE3B-206ENST00000536398 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
UBE3B-206ENST00000536398 LOC107984156A0A0G2JMH3 177 aa8.38□□□□□ -1.07
UBE3B-206ENST00000536398 E9PLD3 99 aa8.38□□□□□ -1.07
UBE3B-206ENST00000536398 EIF4EBP3O60516 100 aaPredicted RBP8.38□□□□□ -1.07
UBE3B-206ENST00000536398 TSPAN13O95857 204 aa8.38□□□□□ -1.07
UBE3B-206ENST00000536398 NMUP48645 174 aa8.38□□□□□ -1.07
UBE3B-206ENST00000536398 LINC01545Q5VT33 79 aa8.38□□□□□ -1.07
UBE3B-206ENST00000536398 ARL17AQ8IVW1 177 aa8.38□□□□□ -1.07
UBE3B-206ENST00000536398 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
UBE3B-206ENST00000536398 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
UBE3B-206ENST00000536398 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
UBE3B-206ENST00000536398 TRBV10-3A0A0K0K1G6 114 aa8.37□□□□□ -1.07
UBE3B-206ENST00000536398 COA6Q5JTJ3 125 aaKnown RBP8.37□□□□□ -1.07
UBE3B-206ENST00000536398 ADAMTSL4-AS1Q5T5F5 129 aa8.37□□□□□ -1.07
UBE3B-206ENST00000536398 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
UBE3B-206ENST00000536398 IGKV2D-26A0A0A0MRZ7 120 aa8.36□□□□□ -1.07
UBE3B-206ENST00000536398 PRYO14603 147 aa8.36□□□□□ -1.07
UBE3B-206ENST00000536398 C3orf79P0CE67 100 aa8.36□□□□□ -1.07
UBE3B-206ENST00000536398 NPC2P61916 151 aa8.36□□□□□ -1.07
UBE3B-206ENST00000536398 PET117Q6UWS5 81 aa8.36□□□□□ -1.07
UBE3B-206ENST00000536398 SOSTDC1Q6X4U4 206 aa8.36□□□□□ -1.07
UBE3B-206ENST00000536398 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
UBE3B-206ENST00000536398 SPRR1AP35321 89 aa8.35□□□□□ -1.07
UBE3B-206ENST00000536398 FAM229BQ4G0N7 80 aa8.35□□□□□ -1.07
UBE3B-206ENST00000536398 KRTDAPP60985 99 aa8.33□□□□□ -1.08
UBE3B-206ENST00000536398 LINC00337Q8N6G1 96 aa8.33□□□□□ -1.08
UBE3B-206ENST00000536398 TTTY13Q9BZ97 58 aa8.33□□□□□ -1.08
UBE3B-206ENST00000536398 DDTP30046 118 aa8.32□□□□□ -1.08
UBE3B-206ENST00000536398 PRR4Q16378 134 aa8.32□□□□□ -1.08
UBE3B-206ENST00000536398 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
UBE3B-206ENST00000536398 SPRR4Q96PI1 79 aa8.32□□□□□ -1.08
UBE3B-206ENST00000536398 LITAFQ99732 161 aa8.32□□□□□ -1.08
UBE3B-206ENST00000536398 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
UBE3B-206ENST00000536398 ETDCA0A1B0GVM5 59 aa8.31□□□□□ -1.08
UBE3B-206ENST00000536398 SMCR5Q8TEV8 140 aa8.31□□□□□ -1.08
UBE3B-206ENST00000536398 MIEN1Q9BRT3 115 aa8.31□□□□□ -1.08
UBE3B-206ENST00000536398 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
UBE3B-206ENST00000536398 B5MCH6 92 aa8.3□□□□□ -1.08
UBE3B-206ENST00000536398 ZNF815PA8K554 130 aa8.29□□□□□ -1.08
UBE3B-206ENST00000536398 NDUFC2O95298 119 aa8.29□□□□□ -1.08
UBE3B-206ENST00000536398 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
UBE3B-206ENST00000536398 ERC2-IT1O76042 136 aa8.28□□□□□ -1.08
UBE3B-206ENST00000536398 IGLV6-57P01721 117 aa8.28□□□□□ -1.08
UBE3B-206ENST00000536398 ATOH7Q8N100 152 aa8.28□□□□□ -1.08
UBE3B-206ENST00000536398 LINC00304Q8N9R0 145 aa8.28□□□□□ -1.08
UBE3B-206ENST00000536398 ANKRD39Q53RE8 183 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms