RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CRYGAP11844 174 aa3□□□□□ -1.93
CHD4-205ENST00000536301 UBE2BP63146 152 aa3□□□□□ -1.93
CHD4-205ENST00000536301 SPAG11BQ08648 103 aa3□□□□□ -1.93
CHD4-205ENST00000536301 SS18Q15532 418 aa3□□□□□ -1.93
CHD4-205ENST00000536301 GAGE2EQ4V326 116 aa3□□□□□ -1.93
CHD4-205ENST00000536301 TYMSOSQ8TAI1 123 aa3□□□□□ -1.93
CHD4-205ENST00000536301 C2orf48Q96LS8 159 aa3□□□□□ -1.93
CHD4-205ENST00000536301 SPANXDQ9BXN6 97 aa3□□□□□ -1.93
CHD4-205ENST00000536301 CDC42SE2Q9NRR3 84 aa3□□□□□ -1.93
CHD4-205ENST00000536301 GAGE2DQ9UEU5 116 aa3□□□□□ -1.93
CHD4-205ENST00000536301 C19orf71A6NCJ1 209 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 H7C423 109 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 COX7A2LO14548 114 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 ZNF861PO60384 105 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 ATP5LO75964 103 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 TSHBP01222 138 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 HBDP02042 147 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 MALP21145 153 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 MT1HP80294 61 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 LYZL1Q6UWQ5 148 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 UNQ6190/PRO20217Q6UXQ8 127 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 LINC00173Q6ZV60 143 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 RAB37Q96AX2 223 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 PPDPFQ9H3Y8 114 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 SPANXB1Q9NS25 103 aaPredicted RBP2.99□□□□□ -1.93
CHD4-205ENST00000536301 C6orf48Q9UBA6 75 aa2.99□□□□□ -1.93
CHD4-205ENST00000536301 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
CHD4-205ENST00000536301 SDHAF1A6NFY7 115 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 E9PLD3 99 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 H3BMG7 143 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 NCR2O95944 276 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 LORP23490 312 aaPredicted RBP2.98□□□□□ -1.93
CHD4-205ENST00000536301 NMUP48645 174 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 TWIST1Q15672 202 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 ASB16-AS1Q495Z4 193 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 C9orf129Q5T035 196 aaKnown RBP2.98□□□□□ -1.93
CHD4-205ENST00000536301 CEND1Q8N111 149 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 ORMDL3Q8N138 153 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 IFI27L1Q96BM0 104 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 URB1-AS1Q96HZ7 61 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 SPANXCQ9NY87 97 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 MRPL35Q9NZE8 188 aaKnown RBP2.98□□□□□ -1.93
CHD4-205ENST00000536301 ERG28Q9UKR5 140 aa2.98□□□□□ -1.93
CHD4-205ENST00000536301 TRBV20-1A0A075B6N2 111 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 TRAV13-1A0A0B4J241 112 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 A0A1B0GWB2 263 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 IGKCP01834 107 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 SPINK8P0C7L1 97 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 TLX1NBP0CAT3 122 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 LINC00242Q5T6M2 205 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 Q6ZUT4 128 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 LINC00304Q8N9R0 145 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 TMEM101Q96IK0 257 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 PRELID3AQ96N28 172 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 ANAPC13Q9BS18 74 aa2.97□□□□□ -1.93
CHD4-205ENST00000536301 NXT2Q9NPJ8 142 aaKnown RBP2.97□□□□□ -1.93
CHD4-205ENST00000536301 I3L3M4 83 aa2.96□□□□□ -1.94
CHD4-205ENST00000536301 DPM2O94777 84 aa2.96□□□□□ -1.94
CHD4-205ENST00000536301 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
CHD4-205ENST00000536301 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.94
CHD4-205ENST00000536301 ETDBQ3ZM63 59 aa2.96□□□□□ -1.94
CHD4-205ENST00000536301 PPDPFLQ8WWR9 84 aa2.96□□□□□ -1.94
CHD4-205ENST00000536301 FAM104AQ969W3 186 aa2.96□□□□□ -1.94
CHD4-205ENST00000536301 HIST1H4GQ99525 98 aa2.96□□□□□ -1.94
CHD4-205ENST00000536301 MAP1LC3AQ9H492 121 aa2.96□□□□□ -1.94
CHD4-205ENST00000536301 NHP2Q9NX24 153 aaKnown RBP2.96□□□□□ -1.94
CHD4-205ENST00000536301 LINC01546A6NGU7 62 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 LINC01549A6NIU2 74 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 NDUFA1O15239 70 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 PLNP26678 52 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 FCER1GP30273 86 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 CKS2P33552 79 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 IFI27P40305 119 aaPredicted RBP2.95□□□□□ -1.94
CHD4-205ENST00000536301 KIAA0087Q14695 138 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 FAM104BQ5XKR9 115 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 Q6Q795 121 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 C2orf82Q6UX34 121 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 C3orf22Q8N5N4 141 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 CNFNQ9BYD5 112 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 UBE2D4Q9Y2X8 147 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 C22orf24Q9Y442 160 aa2.95□□□□□ -1.94
CHD4-205ENST00000536301 IGHV3OR16-9A0A0B4J2B5 98 aa2.94□□□□□ -1.94
CHD4-205ENST00000536301 TRBV6-5A0A0K0K1A5 114 aa2.94□□□□□ -1.94
CHD4-205ENST00000536301 D6R8Y8 96 aa2.94□□□□□ -1.94
CHD4-205ENST00000536301 SNCGO76070 127 aa2.94□□□□□ -1.94
CHD4-205ENST00000536301 SCGB1C2P0DMR2 95 aa2.94□□□□□ -1.94
CHD4-205ENST00000536301 POLR2KP53803 58 aaKnown RBP2.94□□□□□ -1.94
CHD4-205ENST00000536301 FXYD2P54710 66 aa2.94□□□□□ -1.94
CHD4-205ENST00000536301 TEN1Q86WV5 123 aa2.94□□□□□ -1.94
CHD4-205ENST00000536301 PCP2Q8IVA1 136 aa2.94□□□□□ -1.94
CHD4-205ENST00000536301 NAA38Q9BRA0 125 aaKnown RBP2.94□□□□□ -1.94
CHD4-205ENST00000536301 TMEM126AQ9H061 195 aa2.94□□□□□ -1.94
CHD4-205ENST00000536301 MYMXA0A1B0GTQ4 84 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 LOC389332A0A1B0GUA5 103 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 SMKR1H3BMG3 65 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 K7EMI3 77 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 BCE1O60756 84 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 IFITM1P13164 125 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 PAPPA-AS1Q5QFB9 102 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 ZC2HC1BQ5TFG8 222 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms