RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CBLN2Q8IUK8 224 aa8.44□□□□□ -1.06
RTN3P1-201ENST00000536295 Q8NDZ9 215 aa8.44□□□□□ -1.06
RTN3P1-201ENST00000536295 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
RTN3P1-201ENST00000536295 IFI27L1Q96BM0 104 aa8.44□□□□□ -1.06
RTN3P1-201ENST00000536295 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
RTN3P1-201ENST00000536295 FAM19A1Q7Z5A9 133 aa8.43□□□□□ -1.06
RTN3P1-201ENST00000536295 TMEM126AQ9H061 195 aa8.43□□□□□ -1.06
RTN3P1-201ENST00000536295 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
RTN3P1-201ENST00000536295 FAM19A2Q8N3H0 131 aa8.42□□□□□ -1.06
RTN3P1-201ENST00000536295 H0Y8G0 127 aa8.41□□□□□ -1.06
RTN3P1-201ENST00000536295 HSBP1O75506 76 aa8.41□□□□□ -1.06
RTN3P1-201ENST00000536295 M0R378 163 aa8.4□□□□□ -1.06
RTN3P1-201ENST00000536295 ATP6V1G1O75348 118 aa8.39□□□□□ -1.07
RTN3P1-201ENST00000536295 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
RTN3P1-201ENST00000536295 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
RTN3P1-201ENST00000536295 MEIG1Q5JSS6 88 aa8.39□□□□□ -1.07
RTN3P1-201ENST00000536295 TRGC2P03986 189 aa8.38□□□□□ -1.07
RTN3P1-201ENST00000536295 FAM229BQ4G0N7 80 aa8.37□□□□□ -1.07
RTN3P1-201ENST00000536295 IGKV2D-26A0A0A0MRZ7 120 aa8.35□□□□□ -1.07
RTN3P1-201ENST00000536295 NCR3O14931 201 aa8.35□□□□□ -1.07
RTN3P1-201ENST00000536295 SERF1AO75920 110 aa8.35□□□□□ -1.07
RTN3P1-201ENST00000536295 BOD1L2Q8IYS8 172 aa8.35□□□□□ -1.07
RTN3P1-201ENST00000536295 MIR7-3HGQ8N6C7 128 aa8.35□□□□□ -1.07
RTN3P1-201ENST00000536295 HIGD2AQ9BW72 106 aa8.35□□□□□ -1.07
RTN3P1-201ENST00000536295 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
RTN3P1-201ENST00000536295 HERV-K104P63124 156 aa8.34□□□□□ -1.07
RTN3P1-201ENST00000536295 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
RTN3P1-201ENST00000536295 PLEKHB2Q96CS7 222 aa8.34□□□□□ -1.07
RTN3P1-201ENST00000536295 NDUFA12Q9UI09 145 aa8.34□□□□□ -1.07
RTN3P1-201ENST00000536295 LINC00310P59036 64 aa8.33□□□□□ -1.08
RTN3P1-201ENST00000536295 MYMXA0A1B0GTQ4 84 aa8.32□□□□□ -1.08
RTN3P1-201ENST00000536295 FABP4P15090 132 aa8.32□□□□□ -1.08
RTN3P1-201ENST00000536295 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
RTN3P1-201ENST00000536295 SLC7A5P1Q8MH63 180 aa8.32□□□□□ -1.08
RTN3P1-201ENST00000536295 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
RTN3P1-201ENST00000536295 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
RTN3P1-201ENST00000536295 PRYO14603 147 aa8.3□□□□□ -1.08
RTN3P1-201ENST00000536295 C3orf22Q8N5N4 141 aa8.3□□□□□ -1.08
RTN3P1-201ENST00000536295 DAND5Q8N907 189 aa8.3□□□□□ -1.08
RTN3P1-201ENST00000536295 PMCHL2Q9BQD1 86 aa8.3□□□□□ -1.08
RTN3P1-201ENST00000536295 MAP1LC3CQ9BXW4 147 aa8.3□□□□□ -1.08
RTN3P1-201ENST00000536295 HSPB8Q9UJY1 196 aa8.3□□□□□ -1.08
RTN3P1-201ENST00000536295 LEPROTO15243 131 aa8.29□□□□□ -1.08
RTN3P1-201ENST00000536295 PLNP26678 52 aa8.29□□□□□ -1.08
RTN3P1-201ENST00000536295 TRBV10-3A0A0K0K1G6 114 aa8.28□□□□□ -1.08
RTN3P1-201ENST00000536295 SPRR4Q96PI1 79 aa8.28□□□□□ -1.08
RTN3P1-201ENST00000536295 ETDCA0A1B0GVM5 59 aa8.27□□□□□ -1.09
RTN3P1-201ENST00000536295 J3QQQ9 107 aa8.27□□□□□ -1.09
RTN3P1-201ENST00000536295 DPM2O94777 84 aa8.27□□□□□ -1.09
RTN3P1-201ENST00000536295 HERVK_113P61574 105 aa8.27□□□□□ -1.09
RTN3P1-201ENST00000536295 KCNQ1DNQ9H478 68 aa8.27□□□□□ -1.09
RTN3P1-201ENST00000536295 COLCA2A8K830 154 aa8.26□□□□□ -1.09
RTN3P1-201ENST00000536295 IGKCP01834 107 aa8.26□□□□□ -1.09
RTN3P1-201ENST00000536295 LINC00337Q8N6G1 96 aa8.26□□□□□ -1.09
RTN3P1-201ENST00000536295 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
RTN3P1-201ENST00000536295 MUC2Q02817 5179 aa8.25□□□□□ -1.09
RTN3P1-201ENST00000536295 LGALS3P17931 250 aaKnown RBP8.25□□□□□ -1.09
RTN3P1-201ENST00000536295 SPRR1AP35321 89 aa8.25□□□□□ -1.09
RTN3P1-201ENST00000536295 SMCR5Q8TEV8 140 aa8.25□□□□□ -1.09
RTN3P1-201ENST00000536295 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
RTN3P1-201ENST00000536295 KRTAP3-2Q9BYR7 98 aa8.25□□□□□ -1.09
RTN3P1-201ENST00000536295 PPDPFQ9H3Y8 114 aa8.25□□□□□ -1.09
RTN3P1-201ENST00000536295 S100A12P80511 92 aa8.24□□□□□ -1.09
RTN3P1-201ENST00000536295 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
RTN3P1-201ENST00000536295 DDTP30046 118 aa8.23□□□□□ -1.09
RTN3P1-201ENST00000536295 NMUP48645 174 aa8.23□□□□□ -1.09
RTN3P1-201ENST00000536295 MIEN1Q9BRT3 115 aa8.23□□□□□ -1.09
RTN3P1-201ENST00000536295 IGLV7-46A0A075B6I9 117 aa8.21□□□□□ -1.1
RTN3P1-201ENST00000536295 LOC107984156A0A0G2JMH3 177 aa8.21□□□□□ -1.1
RTN3P1-201ENST00000536295 NPC2P61916 151 aa8.21□□□□□ -1.1
RTN3P1-201ENST00000536295 ARL17AQ8IVW1 177 aa8.21□□□□□ -1.1
RTN3P1-201ENST00000536295 TRBV10-2A0A0K0K1G8 114 aa8.2□□□□□ -1.1
RTN3P1-201ENST00000536295 B5MCH6 92 aa8.2□□□□□ -1.1
RTN3P1-201ENST00000536295 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
RTN3P1-201ENST00000536295 GAGE2AQ6NT46 116 aa8.2□□□□□ -1.1
RTN3P1-201ENST00000536295 Q8NBF4 154 aa8.2□□□□□ -1.1
RTN3P1-201ENST00000536295 SPANXB1Q9NS25 103 aaPredicted RBP8.2□□□□□ -1.1
RTN3P1-201ENST00000536295 CTAG1AP78358 180 aa8.19□□□□□ -1.1
RTN3P1-201ENST00000536295 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
RTN3P1-201ENST00000536295 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
RTN3P1-201ENST00000536295 CDIP1Q9H305 208 aa8.19□□□□□ -1.1
RTN3P1-201ENST00000536295 A0A0J9YXY3 114 aa8.18□□□□□ -1.1
RTN3P1-201ENST00000536295 ERC2-IT1O76042 136 aa8.18□□□□□ -1.1
RTN3P1-201ENST00000536295 E9PLD3 99 aa8.17□□□□□ -1.1
RTN3P1-201ENST00000536295 EIF4EBP3O60516 100 aaPredicted RBP8.17□□□□□ -1.1
RTN3P1-201ENST00000536295 NDUFC2O95298 119 aa8.17□□□□□ -1.1
RTN3P1-201ENST00000536295 TPRXLQ17RH7 258 aa8.17□□□□□ -1.1
RTN3P1-201ENST00000536295 ADAMTSL4-AS1Q5T5F5 129 aa8.17□□□□□ -1.1
RTN3P1-201ENST00000536295 SOSTDC1Q6X4U4 206 aa8.17□□□□□ -1.1
RTN3P1-201ENST00000536295 IGLV9-49A0A0B4J1Y8 123 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST1H2BKO60814 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 IGLV6-57P01721 117 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST1H2BJP06899 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST1H2BOP23527 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST1H2BBP33778 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST1H2BDP58876 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST1H2BCP62807 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST2H2BEQ16778 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 LINC00483Q53H64 154 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms