RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 GAGE2DQ9UEU5 116 aa6.83□□□□□ -1.32
LMO3-213ENST00000536172 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
LMO3-213ENST00000536172 TMEM223A0PJW6 202 aa6.82□□□□□ -1.32
LMO3-213ENST00000536172 C3orf79P0CE67 100 aa6.82□□□□□ -1.32
LMO3-213ENST00000536172 HERV-K104P63124 156 aa6.82□□□□□ -1.32
LMO3-213ENST00000536172 KIAA0087Q14695 138 aa6.82□□□□□ -1.32
LMO3-213ENST00000536172 HIST3H2BBQ8N257 126 aa6.82□□□□□ -1.32
LMO3-213ENST00000536172 IGLV5-39A0A0G2JS06 123 aa6.81□□□□□ -1.32
LMO3-213ENST00000536172 NDUFC2-KCTD14E9PQ53 114 aa6.81□□□□□ -1.32
LMO3-213ENST00000536172 LEPROTO15243 131 aa6.81□□□□□ -1.32
LMO3-213ENST00000536172 SCGB1D1O95968 90 aa6.81□□□□□ -1.32
LMO3-213ENST00000536172 LINC00158P58513 81 aa6.81□□□□□ -1.32
LMO3-213ENST00000536172 MEIG1Q5JSS6 88 aa6.81□□□□□ -1.32
LMO3-213ENST00000536172 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
LMO3-213ENST00000536172 PFN2P35080 140 aa6.8□□□□□ -1.32
LMO3-213ENST00000536172 NMUP48645 174 aa6.8□□□□□ -1.32
LMO3-213ENST00000536172 COX17Q14061 63 aa6.8□□□□□ -1.32
LMO3-213ENST00000536172 DIRC1Q969H9 104 aa6.8□□□□□ -1.32
LMO3-213ENST00000536172 C6orf48Q9UBA6 75 aa6.8□□□□□ -1.32
LMO3-213ENST00000536172 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
LMO3-213ENST00000536172 TMA7Q9Y2S6 64 aaKnown RBP6.8□□□□□ -1.32
LMO3-213ENST00000536172 A0A1W2PNN7 141 aa6.79□□□□□ -1.32
LMO3-213ENST00000536172 J3QQQ9 107 aa6.79□□□□□ -1.32
LMO3-213ENST00000536172 TLX1NBP0CAT3 122 aa6.79□□□□□ -1.32
LMO3-213ENST00000536172 C9orf116Q5BN46 136 aaPredicted RBP6.79□□□□□ -1.32
LMO3-213ENST00000536172 C1orf137Q5JT78 98 aa6.79□□□□□ -1.32
LMO3-213ENST00000536172 C10orf25Q5T742 122 aa6.79□□□□□ -1.32
LMO3-213ENST00000536172 HIST1H2BLQ99880 126 aa6.79□□□□□ -1.32
LMO3-213ENST00000536172 ZNF625Q96I27 306 aaPredicted RBP6.78□□□□□ -1.32
LMO3-213ENST00000536172 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
LMO3-213ENST00000536172 C5orf52A6NGY3 159 aa6.77□□□□□ -1.33
LMO3-213ENST00000536172 MIEN1Q9BRT3 115 aa6.77□□□□□ -1.33
LMO3-213ENST00000536172 E9PLD3 99 aa6.76□□□□□ -1.33
LMO3-213ENST00000536172 IGLV7-43P04211 117 aa6.76□□□□□ -1.33
LMO3-213ENST00000536172 RPL24P83731 157 aaKnown RBP6.76□□□□□ -1.33
LMO3-213ENST00000536172 LBHQ53QV2 105 aaPredicted RBP6.76□□□□□ -1.33
LMO3-213ENST00000536172 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
LMO3-213ENST00000536172 NKAPP1Q8N9T2 125 aa6.76□□□□□ -1.33
LMO3-213ENST00000536172 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
LMO3-213ENST00000536172 UBE2BP63146 152 aa6.75□□□□□ -1.33
LMO3-213ENST00000536172 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
LMO3-213ENST00000536172 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
LMO3-213ENST00000536172 COPS9Q8WXC6 57 aa6.75□□□□□ -1.33
LMO3-213ENST00000536172 A0A0U1RRA0 63 aa6.74□□□□□ -1.33
LMO3-213ENST00000536172 H0Y9J4 135 aa6.74□□□□□ -1.33
LMO3-213ENST00000536172 S100A12P80511 92 aa6.74□□□□□ -1.33
LMO3-213ENST00000536172 FAM19A5Q7Z5A7 132 aaPredicted RBP6.74□□□□□ -1.33
LMO3-213ENST00000536172 XAGE1AQ9HD64 81 aa6.74□□□□□ -1.33
LMO3-213ENST00000536172 ZNF815PA8K554 130 aa6.73□□□□□ -1.33
LMO3-213ENST00000536172 RPL13AP40429 203 aaKnown RBP6.73□□□□□ -1.33
LMO3-213ENST00000536172 ATOH7Q8N100 152 aa6.73□□□□□ -1.33
LMO3-213ENST00000536172 PRR26Q8N8Z3 221 aa6.73□□□□□ -1.33
LMO3-213ENST00000536172 SMIM13P0DJ93 91 aa6.72□□□□□ -1.33
LMO3-213ENST00000536172 A0A0U1RQV1 116 aa6.71□□□□□ -1.34
LMO3-213ENST00000536172 M0QXV9 152 aa6.7□□□□□ -1.34
LMO3-213ENST00000536172 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
LMO3-213ENST00000536172 TMEM238C9JI98 176 aa6.69□□□□□ -1.34
LMO3-213ENST00000536172 BOD1L2Q8IYS8 172 aa6.69□□□□□ -1.34
LMO3-213ENST00000536172 MIR7-3HGQ8N6C7 128 aa6.69□□□□□ -1.34
LMO3-213ENST00000536172 VAMP8Q9BV40 100 aa6.69□□□□□ -1.34
LMO3-213ENST00000536172 FAM168BA1KXE4 195 aa6.68□□□□□ -1.34
LMO3-213ENST00000536172 KRTAP1-4P0C5Y4 121 aa6.68□□□□□ -1.34
LMO3-213ENST00000536172 CBY1Q9Y3M2 126 aa6.68□□□□□ -1.34
LMO3-213ENST00000536172 C22orf24Q9Y442 160 aa6.68□□□□□ -1.34
LMO3-213ENST00000536172 A0A0J9YXY3 114 aa6.67□□□□□ -1.34
LMO3-213ENST00000536172 TIMM17BO60830 172 aa6.67□□□□□ -1.34
LMO3-213ENST00000536172 TSPEAR-AS2P59090 65 aa6.67□□□□□ -1.34
LMO3-213ENST00000536172 PRR4Q16378 134 aa6.67□□□□□ -1.34
LMO3-213ENST00000536172 C9orf129Q5T035 196 aaKnown RBP6.67□□□□□ -1.34
LMO3-213ENST00000536172 MRPL55Q7Z7F7 128 aaKnown RBP6.67□□□□□ -1.34
LMO3-213ENST00000536172 TP73-AS1Q9UF72 201 aa6.67□□□□□ -1.34
LMO3-213ENST00000536172 LPAP08519 4548 aa6.67□□□□□ -1.34
LMO3-213ENST00000536172 JOSD1Q15040 202 aaPredicted RBP6.66□□□□□ -1.34
LMO3-213ENST00000536172 Q6ZVH6 145 aa6.66□□□□□ -1.34
LMO3-213ENST00000536172 KRTAP11-1Q8IUC1 163 aa6.66□□□□□ -1.34
LMO3-213ENST00000536172 M0R378 163 aa6.65□□□□□ -1.34
LMO3-213ENST00000536172 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.34
LMO3-213ENST00000536172 IGKV2D-26A0A0A0MRZ7 120 aa6.64□□□□□ -1.35
LMO3-213ENST00000536172 GAGE10A6NGK3 116 aa6.64□□□□□ -1.35
LMO3-213ENST00000536172 SPATA45Q537H7 98 aa6.64□□□□□ -1.35
LMO3-213ENST00000536172 PAM16Q9Y3D7 125 aa6.64□□□□□ -1.35
LMO3-213ENST00000536172 ZNF861PO60384 105 aa6.63□□□□□ -1.35
LMO3-213ENST00000536172 IFITM1P13164 125 aa6.63□□□□□ -1.35
LMO3-213ENST00000536172 KRTAP7-1Q8IUC3 87 aa6.63□□□□□ -1.35
LMO3-213ENST00000536172 LINC00518Q8N0U6 118 aa6.63□□□□□ -1.35
LMO3-213ENST00000536172 DAND5Q8N907 189 aa6.63□□□□□ -1.35
LMO3-213ENST00000536172 IGLV5-37A0A075B6J1 123 aa6.62□□□□□ -1.35
LMO3-213ENST00000536172 RPL37AP8A6NKH3 93 aa6.62□□□□□ -1.35
LMO3-213ENST00000536172 HINT1P49773 126 aaPredicted RBP6.62□□□□□ -1.35
LMO3-213ENST00000536172 NPC2P61916 151 aa6.62□□□□□ -1.35
LMO3-213ENST00000536172 PCP2Q8IVA1 136 aa6.62□□□□□ -1.35
LMO3-213ENST00000536172 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
LMO3-213ENST00000536172 LINC00167Q96N53 147 aa6.62□□□□□ -1.35
LMO3-213ENST00000536172 SPANXB1Q9NS25 103 aaPredicted RBP6.62□□□□□ -1.35
LMO3-213ENST00000536172 H3BS24 57 aa6.61□□□□□ -1.35
LMO3-213ENST00000536172 UBE2AP49459 152 aa6.61□□□□□ -1.35
LMO3-213ENST00000536172 SLC25A34Q6PIV7 304 aa6.61□□□□□ -1.35
LMO3-213ENST00000536172 HIST1H4GQ99525 98 aa6.61□□□□□ -1.35
LMO3-213ENST00000536172 IGKV2-28A0A075B6P5 120 aa6.6□□□□□ -1.35
LMO3-213ENST00000536172 NCR3O14931 201 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms