RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 DPH3Q96FX2 82 aa10.35□□□□□ -0.75
VAMP1-205ENST00000535927 LINC01620Q4KN68 170 aa10.34□□□□□ -0.75
VAMP1-205ENST00000535927 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
VAMP1-205ENST00000535927 PRO1933Q9H354 126 aa10.34□□□□□ -0.75
VAMP1-205ENST00000535927 TP73-AS1Q9UF72 201 aa10.34□□□□□ -0.75
VAMP1-205ENST00000535927 IGKV2-24A0A0C4DH68 120 aa10.33□□□□□ -0.76
VAMP1-205ENST00000535927 A0A0U1RRA0 63 aa10.33□□□□□ -0.76
VAMP1-205ENST00000535927 NDUFC2O95298 119 aa10.33□□□□□ -0.76
VAMP1-205ENST00000535927 FUSP35637 526 aaKnown RBP eCLIP10.33□□□□□ -0.76
VAMP1-205ENST00000535927 PLAC8Q9NZF1 115 aa10.33□□□□□ -0.76
VAMP1-205ENST00000535927 IGLV5-37A0A075B6J1 123 aa10.32□□□□□ -0.76
VAMP1-205ENST00000535927 C9orf129Q5T035 196 aaKnown RBP10.32□□□□□ -0.76
VAMP1-205ENST00000535927 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
VAMP1-205ENST00000535927 XAGE1AQ9HD64 81 aa10.32□□□□□ -0.76
VAMP1-205ENST00000535927 PKD1P98161 4303 aa10.32□□□□□ -0.76
VAMP1-205ENST00000535927 DNAH11Q96DT5 4516 aa10.31□□□□□ -0.76
VAMP1-205ENST00000535927 DYNC1H1Q14204 4646 aaKnown RBP10.31□□□□□ -0.76
VAMP1-205ENST00000535927 LBHQ53QV2 105 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-205ENST00000535927 HIST1H4GQ99525 98 aa10.3□□□□□ -0.76
VAMP1-205ENST00000535927 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-205ENST00000535927 A0A087WYN8 130 aa10.29□□□□□ -0.76
VAMP1-205ENST00000535927 TRBV10-2A0A0K0K1G8 114 aa10.29□□□□□ -0.76
VAMP1-205ENST00000535927 HNRNPA3P51991 378 aaKnown RBP10.29□□□□□ -0.76
VAMP1-205ENST00000535927 CDK2AP2O75956 126 aa10.28□□□□□ -0.76
VAMP1-205ENST00000535927 CHTF8P0CG12 524 aa10.28□□□□□ -0.76
VAMP1-205ENST00000535927 C2orf91Q6ZV80 131 aa10.28□□□□□ -0.76
VAMP1-205ENST00000535927 DAND5Q8N907 189 aa10.28□□□□□ -0.76
VAMP1-205ENST00000535927 CBY1Q9Y3M2 126 aa10.28□□□□□ -0.76
VAMP1-205ENST00000535927 MUSTN1Q8IVN3 82 aa10.27□□□□□ -0.77
VAMP1-205ENST00000535927 NKAPP1Q8N9T2 125 aa10.27□□□□□ -0.77
VAMP1-205ENST00000535927 FAM30AQ9NZY2 134 aa10.27□□□□□ -0.77
VAMP1-205ENST00000535927 VPREB1P12018 145 aa10.26□□□□□ -0.77
VAMP1-205ENST00000535927 HSD52Q0P140 79 aa10.26□□□□□ -0.77
VAMP1-205ENST00000535927 TMEM238LA0A1B0GVL6 79 aa10.25□□□□□ -0.77
VAMP1-205ENST00000535927 A0A1W2PNN7 141 aa10.25□□□□□ -0.77
VAMP1-205ENST00000535927 A6NJY4 79 aa10.25□□□□□ -0.77
VAMP1-205ENST00000535927 PANO1I0J062 215 aa10.25□□□□□ -0.77
VAMP1-205ENST00000535927 M0R378 163 aa10.25□□□□□ -0.77
VAMP1-205ENST00000535927 SOSTDC1Q6X4U4 206 aa10.25□□□□□ -0.77
VAMP1-205ENST00000535927 CIRBP-AS1Q8TBR5 109 aa10.25□□□□□ -0.77
VAMP1-205ENST00000535927 PCP4L1A6NKN8 68 aa10.24□□□□□ -0.77
VAMP1-205ENST00000535927 DDTP30046 118 aa10.24□□□□□ -0.77
VAMP1-205ENST00000535927 C22orf24Q9Y442 160 aa10.24□□□□□ -0.77
VAMP1-205ENST00000535927 SCXQ7RTU7 201 aa10.23□□□□□ -0.77
VAMP1-205ENST00000535927 MRPL55Q7Z7F7 128 aaKnown RBP10.23□□□□□ -0.77
VAMP1-205ENST00000535927 CEND1Q8N111 149 aa10.23□□□□□ -0.77
VAMP1-205ENST00000535927 M0QXV9 152 aa10.22□□□□□ -0.77
VAMP1-205ENST00000535927 SERTAD4-AS1Q5TG53 156 aa10.22□□□□□ -0.77
VAMP1-205ENST00000535927 FAM19A5Q7Z5A7 132 aaPredicted RBP10.22□□□□□ -0.77
VAMP1-205ENST00000535927 FAM168BA1KXE4 195 aa10.21□□□□□ -0.77
VAMP1-205ENST00000535927 C7orf33Q8WU49 177 aa10.21□□□□□ -0.77
VAMP1-205ENST00000535927 DNAH5Q8TE73 4624 aa10.21□□□□□ -0.78
VAMP1-205ENST00000535927 TRAV13-2A0A0B4J235 113 aa10.2□□□□□ -0.78
VAMP1-205ENST00000535927 XGP55808 180 aa10.2□□□□□ -0.78
VAMP1-205ENST00000535927 NPC2P61916 151 aa10.2□□□□□ -0.78
VAMP1-205ENST00000535927 KRTAP7-1Q8IUC3 87 aa10.2□□□□□ -0.78
VAMP1-205ENST00000535927 KRTAP4-5Q9BYR2 181 aa10.2□□□□□ -0.78
VAMP1-205ENST00000535927 TMEM126AQ9H061 195 aa10.2□□□□□ -0.78
VAMP1-205ENST00000535927 A4D1N5 150 aa10.19□□□□□ -0.78
VAMP1-205ENST00000535927 M0R143 59 aa10.19□□□□□ -0.78
VAMP1-205ENST00000535927 EIF4EBP3O60516 100 aaPredicted RBP10.18□□□□□ -0.78
VAMP1-205ENST00000535927 LINC00167Q96N53 147 aa10.18□□□□□ -0.78
VAMP1-205ENST00000535927 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
VAMP1-205ENST00000535927 IGLV1-50A0A075B6I6 118 aa10.16□□□□□ -0.78
VAMP1-205ENST00000535927 IGLV6-57P01721 117 aa10.16□□□□□ -0.78
VAMP1-205ENST00000535927 Q8NDZ9 215 aa10.16□□□□□ -0.78
VAMP1-205ENST00000535927 IGKV2-28A0A075B6P5 120 aa10.15□□□□□ -0.78
VAMP1-205ENST00000535927 A0A0B4J2C4 111 aa10.15□□□□□ -0.78
VAMP1-205ENST00000535927 IGKV2D-28P01615 120 aa10.15□□□□□ -0.78
VAMP1-205ENST00000535927 UBE2BP63146 152 aa10.15□□□□□ -0.78
VAMP1-205ENST00000535927 CTAG1AP78358 180 aa10.15□□□□□ -0.78
VAMP1-205ENST00000535927 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.78
VAMP1-205ENST00000535927 HSPG2P98160 4391 aa10.15□□□□□ -0.78
VAMP1-205ENST00000535927 PRR3P79522 188 aaKnown RBP10.14□□□□□ -0.79
VAMP1-205ENST00000535927 PHF5AQ7RTV0 110 aaKnown RBP10.14□□□□□ -0.79
VAMP1-205ENST00000535927 NCR3O14931 201 aa10.13□□□□□ -0.79
VAMP1-205ENST00000535927 DNAH8Q96JB1 4490 aa10.12□□□□□ -0.79
VAMP1-205ENST00000535927 PRYO14603 147 aa10.12□□□□□ -0.79
VAMP1-205ENST00000535927 OR13C6PQ8NH95 151 aa10.12□□□□□ -0.79
VAMP1-205ENST00000535927 RAB37Q96AX2 223 aa10.12□□□□□ -0.79
VAMP1-205ENST00000535927 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
VAMP1-205ENST00000535927 TRBV10-3A0A0K0K1G6 114 aa10.11□□□□□ -0.79
VAMP1-205ENST00000535927 A0A1B0GWB2 263 aa10.11□□□□□ -0.79
VAMP1-205ENST00000535927 A6NDN8 102 aa10.11□□□□□ -0.79
VAMP1-205ENST00000535927 CFC1BP0CG36 223 aa10.11□□□□□ -0.79
VAMP1-205ENST00000535927 CFC1P0CG37 223 aa10.11□□□□□ -0.79
VAMP1-205ENST00000535927 FXYD2P54710 66 aa10.11□□□□□ -0.79
VAMP1-205ENST00000535927 BVES-AS1Q5T3Y7 98 aa10.11□□□□□ -0.79
VAMP1-205ENST00000535927 LINC00337Q8N6G1 96 aa10.11□□□□□ -0.79
VAMP1-205ENST00000535927 PRO1854Q9UHT4 67 aa10.1□□□□□ -0.79
VAMP1-205ENST00000535927 GAGE10A6NGK3 116 aa10.09□□□□□ -0.79
VAMP1-205ENST00000535927 FAM229AH3BQW9 127 aa10.09□□□□□ -0.79
VAMP1-205ENST00000535927 HINT1P49773 126 aaPredicted RBP10.09□□□□□ -0.79
VAMP1-205ENST00000535927 TRBV7-6A0A0J9YX20 115 aa10.08□□□□□ -0.8
VAMP1-205ENST00000535927 RPL37AP8A6NKH3 93 aa10.08□□□□□ -0.8
VAMP1-205ENST00000535927 BATFQ16520 125 aa10.08□□□□□ -0.8
VAMP1-205ENST00000535927 REG3GQ6UW15 175 aa10.08□□□□□ -0.8
VAMP1-205ENST00000535927 TRAV23DV6A0A075B6W5 121 aa10.07□□□□□ -0.8
VAMP1-205ENST00000535927 PLA2G1BP04054 148 aaKnown RBP10.07□□□□□ -0.8
VAMP1-205ENST00000535927 SPRR1AP35321 89 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms