RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 C9orf116Q5BN46 136 aaPredicted RBP10.16□□□□□ -0.78
ATL3-202ENST00000535789 ZNF625Q96I27 306 aaPredicted RBP10.16□□□□□ -0.78
ATL3-202ENST00000535789 FAM168BA1KXE4 195 aa10.15□□□□□ -0.78
ATL3-202ENST00000535789 F8WDY8 70 aa10.15□□□□□ -0.78
ATL3-202ENST00000535789 PRSS2P07478 247 aa10.15□□□□□ -0.78
ATL3-202ENST00000535789 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.78
ATL3-202ENST00000535789 COX8AP10176 69 aa10.15□□□□□ -0.78
ATL3-202ENST00000535789 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
ATL3-202ENST00000535789 CXCL5P42830 114 aa10.14□□□□□ -0.79
ATL3-202ENST00000535789 C6orf226Q5I0X4 101 aa10.14□□□□□ -0.79
ATL3-202ENST00000535789 TP73-AS1Q9UF72 201 aa10.14□□□□□ -0.79
ATL3-202ENST00000535789 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
ATL3-202ENST00000535789 PHF5AQ7RTV0 110 aaKnown RBP10.13□□□□□ -0.79
ATL3-202ENST00000535789 KRTAP11-1Q8IUC1 163 aa10.13□□□□□ -0.79
ATL3-202ENST00000535789 BOD1L2Q8IYS8 172 aa10.13□□□□□ -0.79
ATL3-202ENST00000535789 C14orf144Q96I85 54 aa10.13□□□□□ -0.79
ATL3-202ENST00000535789 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
ATL3-202ENST00000535789 ZNF815PA8K554 130 aa10.12□□□□□ -0.79
ATL3-202ENST00000535789 DLEU1O43261 78 aa10.11□□□□□ -0.79
ATL3-202ENST00000535789 TRBV30A0A0K0K1B3 111 aa10.1□□□□□ -0.79
ATL3-202ENST00000535789 CKS1BP61024 79 aa10.1□□□□□ -0.79
ATL3-202ENST00000535789 SLC25A34Q6PIV7 304 aa10.1□□□□□ -0.79
ATL3-202ENST00000535789 SFTA2Q6UW10 78 aa10.1□□□□□ -0.79
ATL3-202ENST00000535789 PRO1933Q9H354 126 aa10.1□□□□□ -0.79
ATL3-202ENST00000535789 HERV-K104P63124 156 aa10.09□□□□□ -0.79
ATL3-202ENST00000535789 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
ATL3-202ENST00000535789 GAGE2EQ4V326 116 aa10.09□□□□□ -0.79
ATL3-202ENST00000535789 C9orf129Q5T035 196 aaKnown RBP10.09□□□□□ -0.79
ATL3-202ENST00000535789 GAGE2DQ9UEU5 116 aa10.09□□□□□ -0.79
ATL3-202ENST00000535789 PSORS1C2Q9UIG4 136 aa10.09□□□□□ -0.79
ATL3-202ENST00000535789 A0A0J9YXY3 114 aa10.08□□□□□ -0.8
ATL3-202ENST00000535789 FAM19A5Q7Z5A7 132 aaPredicted RBP10.07□□□□□ -0.8
ATL3-202ENST00000535789 UQCR10Q9UDW1 63 aa10.07□□□□□ -0.8
ATL3-202ENST00000535789 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
ATL3-202ENST00000535789 C2orf91Q6ZV80 131 aa10.06□□□□□ -0.8
ATL3-202ENST00000535789 LITAFQ99732 161 aa10.05□□□□□ -0.8
ATL3-202ENST00000535789 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
ATL3-202ENST00000535789 SPINK6Q6UWN8 80 aa10.04□□□□□ -0.8
ATL3-202ENST00000535789 SCGB1D4Q6XE38 83 aa10.04□□□□□ -0.8
ATL3-202ENST00000535789 MIEN1Q9BRT3 115 aa10.04□□□□□ -0.8
ATL3-202ENST00000535789 TSTD3H0UI37 97 aa10.03□□□□□ -0.8
ATL3-202ENST00000535789 TIMM17BO60830 172 aa10.03□□□□□ -0.8
ATL3-202ENST00000535789 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
ATL3-202ENST00000535789 LINC01600Q96MT4 127 aa10.03□□□□□ -0.8
ATL3-202ENST00000535789 MEIG1Q5JSS6 88 aa10.02□□□□□ -0.81
ATL3-202ENST00000535789 SERTAD4-AS1Q5TG53 156 aa10.02□□□□□ -0.81
ATL3-202ENST00000535789 HIGD1BQ9P298 99 aa10.02□□□□□ -0.81
ATL3-202ENST00000535789 M0QXV9 152 aa10.01□□□□□ -0.81
ATL3-202ENST00000535789 COX17Q14061 63 aa10.01□□□□□ -0.81
ATL3-202ENST00000535789 ADAMTSL4-AS1Q5T5F5 129 aa10.01□□□□□ -0.81
ATL3-202ENST00000535789 LINC00587B1AMM8 73 aa10□□□□□ -0.81
ATL3-202ENST00000535789 PFN2P35080 140 aa10□□□□□ -0.81
ATL3-202ENST00000535789 C1orf137Q5JT78 98 aa10□□□□□ -0.81
ATL3-202ENST00000535789 XAGE1AQ9HD64 81 aa10□□□□□ -0.81
ATL3-202ENST00000535789 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
ATL3-202ENST00000535789 A0A0U1RRA0 63 aa9.99□□□□□ -0.81
ATL3-202ENST00000535789 TMEM238C9JI98 176 aa9.99□□□□□ -0.81
ATL3-202ENST00000535789 SPANXDQ9BXN6 97 aa9.99□□□□□ -0.81
ATL3-202ENST00000535789 SPANXCQ9NY87 97 aa9.99□□□□□ -0.81
ATL3-202ENST00000535789 LINC00158P58513 81 aa9.98□□□□□ -0.81
ATL3-202ENST00000535789 MIR7-3HGQ8N6C7 128 aa9.98□□□□□ -0.81
ATL3-202ENST00000535789 DAND5Q8N907 189 aa9.98□□□□□ -0.81
ATL3-202ENST00000535789 UBR4Q5T4S7 5183 aa9.97□□□□□ -0.81
ATL3-202ENST00000535789 IGLV7-43P04211 117 aa9.97□□□□□ -0.81
ATL3-202ENST00000535789 KRTAP10-8P60410 259 aa9.97□□□□□ -0.81
ATL3-202ENST00000535789 DDTP30046 118 aa9.95□□□□□ -0.82
ATL3-202ENST00000535789 Q6ZVH6 145 aa9.95□□□□□ -0.82
ATL3-202ENST00000535789 EIF4EBP3O60516 100 aaPredicted RBP9.94□□□□□ -0.82
ATL3-202ENST00000535789 REG3GQ6UW15 175 aa9.94□□□□□ -0.82
ATL3-202ENST00000535789 SOSTDC1Q6X4U4 206 aa9.94□□□□□ -0.82
ATL3-202ENST00000535789 SND1-IT1Q9HBX3 110 aa9.94□□□□□ -0.82
ATL3-202ENST00000535789 TAL2Q16559 108 aa9.93□□□□□ -0.82
ATL3-202ENST00000535789 LINC00308Q8TCZ7 52 aa9.93□□□□□ -0.82
ATL3-202ENST00000535789 HIST1H4GQ99525 98 aa9.93□□□□□ -0.82
ATL3-202ENST00000535789 PLA2G2DQ9UNK4 145 aa9.93□□□□□ -0.82
ATL3-202ENST00000535789 C22orf24Q9Y442 160 aa9.93□□□□□ -0.82
ATL3-202ENST00000535789 LRP2P98164 4655 aa9.93□□□□□ -0.82
ATL3-202ENST00000535789 LOC107984156A0A0G2JMH3 177 aa9.92□□□□□ -0.82
ATL3-202ENST00000535789 IFITM1P13164 125 aa9.92□□□□□ -0.82
ATL3-202ENST00000535789 NPC2P61916 151 aa9.92□□□□□ -0.82
ATL3-202ENST00000535789 UBE2BP63146 152 aa9.92□□□□□ -0.82
ATL3-202ENST00000535789 HSD52Q0P140 79 aa9.92□□□□□ -0.82
ATL3-202ENST00000535789 ARL17AQ8IVW1 177 aa9.92□□□□□ -0.82
ATL3-202ENST00000535789 PPDPFQ9H3Y8 114 aa9.92□□□□□ -0.82
ATL3-202ENST00000535789 CTAG1AP78358 180 aa9.91□□□□□ -0.82
ATL3-202ENST00000535789 MUSTN1Q8IVN3 82 aa9.91□□□□□ -0.82
ATL3-202ENST00000535789 H0Y9J4 135 aa9.9□□□□□ -0.82
ATL3-202ENST00000535789 KRTAP1-4P0C5Y4 121 aa9.9□□□□□ -0.82
ATL3-202ENST00000535789 CEND1Q8N111 149 aa9.89□□□□□ -0.83
ATL3-202ENST00000535789 Q8NDZ9 215 aa9.89□□□□□ -0.83
ATL3-202ENST00000535789 PCP4L1A6NKN8 68 aa9.87□□□□□ -0.83
ATL3-202ENST00000535789 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
ATL3-202ENST00000535789 COPS9Q8WXC6 57 aa9.87□□□□□ -0.83
ATL3-202ENST00000535789 IGLV5-37A0A075B6J1 123 aa9.86□□□□□ -0.83
ATL3-202ENST00000535789 FXYD2P54710 66 aa9.86□□□□□ -0.83
ATL3-202ENST00000535789 DIRC1Q969H9 104 aa9.86□□□□□ -0.83
ATL3-202ENST00000535789 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
ATL3-202ENST00000535789 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
ATL3-202ENST00000535789 BVES-AS1Q5T3Y7 98 aa9.85□□□□□ -0.83
ATL3-202ENST00000535789 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms