RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 LITAFQ99732 161 aa9.86□□□□□ -0.83
CNN1-202ENST00000535659 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
CNN1-202ENST00000535659 HSPG2P98160 4391 aa9.86□□□□□ -0.83
CNN1-202ENST00000535659 CDK2AP2O75956 126 aa9.85□□□□□ -0.83
CNN1-202ENST00000535659 SMIM6P0DI80 62 aa9.85□□□□□ -0.83
CNN1-202ENST00000535659 FAM168BA1KXE4 195 aa9.84□□□□□ -0.83
CNN1-202ENST00000535659 EPM2AB3EWF7 344 aa9.83□□□□□ -0.84
CNN1-202ENST00000535659 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
CNN1-202ENST00000535659 LOC107984156A0A0G2JMH3 177 aa9.82□□□□□ -0.84
CNN1-202ENST00000535659 TMEM238C9JI98 176 aa9.82□□□□□ -0.84
CNN1-202ENST00000535659 SLC25A34Q6PIV7 304 aa9.82□□□□□ -0.84
CNN1-202ENST00000535659 KRTAP7-1Q8IUC3 87 aa9.82□□□□□ -0.84
CNN1-202ENST00000535659 ARL17AQ8IVW1 177 aa9.82□□□□□ -0.84
CNN1-202ENST00000535659 TP73-AS1Q9UF72 201 aa9.82□□□□□ -0.84
CNN1-202ENST00000535659 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
CNN1-202ENST00000535659 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
CNN1-202ENST00000535659 RPL24P83731 157 aaKnown RBP9.8□□□□□ -0.84
CNN1-202ENST00000535659 Q6ZVH6 145 aa9.8□□□□□ -0.84
CNN1-202ENST00000535659 MIEN1Q9BRT3 115 aa9.8□□□□□ -0.84
CNN1-202ENST00000535659 SPANXDQ9BXN6 97 aa9.8□□□□□ -0.84
CNN1-202ENST00000535659 SPANXCQ9NY87 97 aa9.8□□□□□ -0.84
CNN1-202ENST00000535659 NPC2P61916 151 aa9.79□□□□□ -0.84
CNN1-202ENST00000535659 LINC00308Q8TCZ7 52 aa9.79□□□□□ -0.84
CNN1-202ENST00000535659 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
CNN1-202ENST00000535659 SRSF9Q13242 221 aaKnown RBP eCLIP9.78□□□□□ -0.84
CNN1-202ENST00000535659 SOSTDC1Q6X4U4 206 aa9.78□□□□□ -0.84
CNN1-202ENST00000535659 FAT1Q14517 4588 aa9.78□□□□□ -0.84
CNN1-202ENST00000535659 IGLV5-37A0A075B6J1 123 aa9.77□□□□□ -0.84
CNN1-202ENST00000535659 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.84
CNN1-202ENST00000535659 VPREB1P12018 145 aa9.77□□□□□ -0.84
CNN1-202ENST00000535659 Q8NDZ9 215 aa9.77□□□□□ -0.84
CNN1-202ENST00000535659 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.84
CNN1-202ENST00000535659 IFITM1P13164 125 aa9.77□□□□□ -0.85
CNN1-202ENST00000535659 PHF5AQ7RTV0 110 aaKnown RBP9.77□□□□□ -0.85
CNN1-202ENST00000535659 COPS9Q8WXC6 57 aa9.77□□□□□ -0.85
CNN1-202ENST00000535659 HIGD1BQ9P298 99 aa9.77□□□□□ -0.85
CNN1-202ENST00000535659 M0QXV9 152 aa9.76□□□□□ -0.85
CNN1-202ENST00000535659 SMR3BP02814 79 aaPredicted RBP9.76□□□□□ -0.85
CNN1-202ENST00000535659 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
CNN1-202ENST00000535659 NKAPP1Q8N9T2 125 aa9.76□□□□□ -0.85
CNN1-202ENST00000535659 C12orf57Q99622 126 aa9.76□□□□□ -0.85
CNN1-202ENST00000535659 PRR3P79522 188 aaKnown RBP9.75□□□□□ -0.85
CNN1-202ENST00000535659 LBHQ53QV2 105 aaPredicted RBP9.75□□□□□ -0.85
CNN1-202ENST00000535659 UQCR10Q9UDW1 63 aa9.75□□□□□ -0.85
CNN1-202ENST00000535659 NDUFC2O95298 119 aa9.74□□□□□ -0.85
CNN1-202ENST00000535659 C2orf91Q6ZV80 131 aa9.74□□□□□ -0.85
CNN1-202ENST00000535659 MRPL55Q7Z7F7 128 aaKnown RBP9.74□□□□□ -0.85
CNN1-202ENST00000535659 PPDPFQ9H3Y8 114 aa9.74□□□□□ -0.85
CNN1-202ENST00000535659 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
CNN1-202ENST00000535659 HIST1H4GQ99525 98 aa9.73□□□□□ -0.85
CNN1-202ENST00000535659 PRO1933Q9H354 126 aa9.73□□□□□ -0.85
CNN1-202ENST00000535659 M0R378 163 aa9.72□□□□□ -0.85
CNN1-202ENST00000535659 LINC00518Q8N0U6 118 aa9.72□□□□□ -0.85
CNN1-202ENST00000535659 LINC00167Q96N53 147 aa9.72□□□□□ -0.85
CNN1-202ENST00000535659 VPS13BQ7Z7G8 4022 aa9.72□□□□□ -0.85
CNN1-202ENST00000535659 GAGE10A6NGK3 116 aa9.71□□□□□ -0.86
CNN1-202ENST00000535659 KRTAP4-5Q9BYR2 181 aa9.71□□□□□ -0.86
CNN1-202ENST00000535659 TRBV10-2A0A0K0K1G8 114 aa9.7□□□□□ -0.86
CNN1-202ENST00000535659 NCR3O14931 201 aa9.7□□□□□ -0.86
CNN1-202ENST00000535659 UBE2BP63146 152 aa9.7□□□□□ -0.86
CNN1-202ENST00000535659 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
CNN1-202ENST00000535659 TAL2Q16559 108 aa9.69□□□□□ -0.86
CNN1-202ENST00000535659 RPL37AP8A6NKH3 93 aa9.68□□□□□ -0.86
CNN1-202ENST00000535659 KRTAP11-1Q8IUC1 163 aa9.68□□□□□ -0.86
CNN1-202ENST00000535659 IGLV1-50A0A075B6I6 118 aa9.67□□□□□ -0.86
CNN1-202ENST00000535659 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
CNN1-202ENST00000535659 IGKV2-28A0A075B6P5 120 aa9.66□□□□□ -0.86
CNN1-202ENST00000535659 IGKV2D-28P01615 120 aa9.66□□□□□ -0.86
CNN1-202ENST00000535659 ABCA13Q86UQ4 5058 aa9.66□□□□□ -0.86
CNN1-202ENST00000535659 A4D1N5 150 aa9.66□□□□□ -0.86
CNN1-202ENST00000535659 HNRNPA3P51991 378 aaKnown RBP9.66□□□□□ -0.86
CNN1-202ENST00000535659 Q8N1X5 172 aa9.66□□□□□ -0.86
CNN1-202ENST00000535659 TSTD3H0UI37 97 aa9.65□□□□□ -0.86
CNN1-202ENST00000535659 S100A7L2Q5SY68 101 aa9.65□□□□□ -0.86
CNN1-202ENST00000535659 CEND1Q8N111 149 aa9.65□□□□□ -0.86
CNN1-202ENST00000535659 PSORS1C2Q9UIG4 136 aa9.65□□□□□ -0.86
CNN1-202ENST00000535659 TRBV10-3A0A0K0K1G6 114 aa9.64□□□□□ -0.87
CNN1-202ENST00000535659 DDTP30046 118 aa9.64□□□□□ -0.87
CNN1-202ENST00000535659 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
CNN1-202ENST00000535659 OR13C6PQ8NH95 151 aa9.64□□□□□ -0.87
CNN1-202ENST00000535659 IGLV6-57P01721 117 aa9.63□□□□□ -0.87
CNN1-202ENST00000535659 HSD52Q0P140 79 aa9.63□□□□□ -0.87
CNN1-202ENST00000535659 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
CNN1-202ENST00000535659 LINC00337Q8N6G1 96 aa9.62□□□□□ -0.87
CNN1-202ENST00000535659 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
CNN1-202ENST00000535659 C1orf137Q5JT78 98 aa9.61□□□□□ -0.87
CNN1-202ENST00000535659 Q5VSD8 79 aa9.61□□□□□ -0.87
CNN1-202ENST00000535659 KCNQ1DNQ9H478 68 aa9.61□□□□□ -0.87
CNN1-202ENST00000535659 TRAV13-2A0A0B4J235 113 aa9.61□□□□□ -0.87
CNN1-202ENST00000535659 A6NDN8 102 aa9.61□□□□□ -0.87
CNN1-202ENST00000535659 REG3GQ6UW15 175 aa9.6□□□□□ -0.87
CNN1-202ENST00000535659 KRTAP10-4P60372 401 aaPredicted RBP9.59□□□□□ -0.87
CNN1-202ENST00000535659 CBY1Q9Y3M2 126 aa9.59□□□□□ -0.87
CNN1-202ENST00000535659 TMEM238LA0A1B0GVL6 79 aa9.58□□□□□ -0.88
CNN1-202ENST00000535659 A6NJY4 79 aa9.58□□□□□ -0.88
CNN1-202ENST00000535659 PRYO14603 147 aa9.58□□□□□ -0.88
CNN1-202ENST00000535659 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
CNN1-202ENST00000535659 CFC1P0CG37 223 aa9.58□□□□□ -0.88
CNN1-202ENST00000535659 FXYD2P54710 66 aa9.58□□□□□ -0.88
CNN1-202ENST00000535659 CTAG1AP78358 180 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms