RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 KRTAP7-1Q8IUC3 87 aa13.49□□□□□ -0.25
SSPN-204ENST00000535504 C20orf202A1L168 122 aa13.48□□□□□ -0.25
SSPN-204ENST00000535504 NMUP48645 174 aa13.48□□□□□ -0.25
SSPN-204ENST00000535504 A0A0U1RRA0 63 aa13.47□□□□□ -0.25
SSPN-204ENST00000535504 J3QQQ9 107 aa13.47□□□□□ -0.25
SSPN-204ENST00000535504 IGLV7-43P04211 117 aa13.47□□□□□ -0.25
SSPN-204ENST00000535504 IGLV5-37A0A075B6J1 123 aa13.46□□□□□ -0.25
SSPN-204ENST00000535504 DIRC1Q969H9 104 aa13.46□□□□□ -0.25
SSPN-204ENST00000535504 KRTDAPP60985 99 aa13.45□□□□□ -0.26
SSPN-204ENST00000535504 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
SSPN-204ENST00000535504 AKR1D1P51857 326 aa13.44□□□□□ -0.26
SSPN-204ENST00000535504 LINC01545Q5VT33 79 aa13.44□□□□□ -0.26
SSPN-204ENST00000535504 GAGE10A6NGK3 116 aa13.43□□□□□ -0.26
SSPN-204ENST00000535504 S100A6P06703 90 aa13.43□□□□□ -0.26
SSPN-204ENST00000535504 S100A2P29034 98 aa13.43□□□□□ -0.26
SSPN-204ENST00000535504 SRSF9Q13242 221 aaKnown RBP eCLIP13.43□□□□□ -0.26
SSPN-204ENST00000535504 LINC00167Q96N53 147 aa13.43□□□□□ -0.26
SSPN-204ENST00000535504 MYCBP2O75592 4640 aa13.42□□□□□ -0.26
SSPN-204ENST00000535504 RPL37AP8A6NKH3 93 aa13.41□□□□□ -0.26
SSPN-204ENST00000535504 E9PLD3 99 aa13.41□□□□□ -0.26
SSPN-204ENST00000535504 C3orf79P0CE67 100 aa13.41□□□□□ -0.26
SSPN-204ENST00000535504 MIR7-3HGQ8N6C7 128 aa13.4□□□□□ -0.26
SSPN-204ENST00000535504 MIEN1Q9BRT3 115 aa13.4□□□□□ -0.26
SSPN-204ENST00000535504 VPREB1P12018 145 aa13.39□□□□□ -0.27
SSPN-204ENST00000535504 TSPEAR-AS2P59090 65 aa13.39□□□□□ -0.27
SSPN-204ENST00000535504 KRTAP11-1Q8IUC1 163 aa13.39□□□□□ -0.27
SSPN-204ENST00000535504 RPL28P46779 137 aaKnown RBP13.37□□□□□ -0.27
SSPN-204ENST00000535504 BOD1L2Q8IYS8 172 aa13.37□□□□□ -0.27
SSPN-204ENST00000535504 PKHD1L1Q86WI1 4243 aa13.37□□□□□ -0.27
SSPN-204ENST00000535504 IGKV2-28A0A075B6P5 120 aa13.36□□□□□ -0.27
SSPN-204ENST00000535504 BCE1O60756 84 aa13.36□□□□□ -0.27
SSPN-204ENST00000535504 IGKV2D-28P01615 120 aa13.36□□□□□ -0.27
SSPN-204ENST00000535504 H0Y9J4 135 aa13.35□□□□□ -0.27
SSPN-204ENST00000535504 UBE2AP49459 152 aa13.35□□□□□ -0.27
SSPN-204ENST00000535504 S100A12P80511 92 aa13.35□□□□□ -0.27
SSPN-204ENST00000535504 LINC01600Q96MT4 127 aa13.35□□□□□ -0.27
SSPN-204ENST00000535504 M0R378 163 aa13.34□□□□□ -0.27
SSPN-204ENST00000535504 ZNF861PO60384 105 aa13.34□□□□□ -0.27
SSPN-204ENST00000535504 IGLV1-50A0A075B6I6 118 aa13.31□□□□□ -0.28
SSPN-204ENST00000535504 IGKV2D-26A0A0A0MRZ7 120 aa13.31□□□□□ -0.28
SSPN-204ENST00000535504 A0A0J9YXY3 114 aa13.29□□□□□ -0.28
SSPN-204ENST00000535504 ZNF815PA8K554 130 aa13.29□□□□□ -0.28
SSPN-204ENST00000535504 HIST3H2BBQ8N257 126 aa13.29□□□□□ -0.28
SSPN-204ENST00000535504 DAND5Q8N907 189 aa13.29□□□□□ -0.28
SSPN-204ENST00000535504 NCR3O14931 201 aa13.28□□□□□ -0.28
SSPN-204ENST00000535504 FAM19A1Q7Z5A9 133 aa13.27□□□□□ -0.29
SSPN-204ENST00000535504 SNRPEP62304 92 aaKnown RBP13.26□□□□□ -0.29
SSPN-204ENST00000535504 TMEM126AQ9H061 195 aa13.26□□□□□ -0.29
SSPN-204ENST00000535504 HSBP1L1C9JCN9 74 aa13.25□□□□□ -0.29
SSPN-204ENST00000535504 HIST1H2BLQ99880 126 aa13.25□□□□□ -0.29
SSPN-204ENST00000535504 SCGB1D4Q6XE38 83 aa13.24□□□□□ -0.29
SSPN-204ENST00000535504 LRP1Q07954 4544 aaKnown RBP13.24□□□□□ -0.29
SSPN-204ENST00000535504 LOC107984156A0A0G2JMH3 177 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 PRYO14603 147 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 TIMM17BO60830 172 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 MT1HL1P0DM35 61 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 ARL17AQ8IVW1 177 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 ATOH7Q8N100 152 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 Q8NDZ9 215 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 SPANXB1Q9NS25 103 aaPredicted RBP13.23□□□□□ -0.29
SSPN-204ENST00000535504 FAT3Q8TDW7 4589 aa13.22□□□□□ -0.29
SSPN-204ENST00000535504 TMEM238C9JI98 176 aa13.22□□□□□ -0.29
SSPN-204ENST00000535504 TRBV10-2A0A0K0K1G8 114 aa13.21□□□□□ -0.29
SSPN-204ENST00000535504 NDUFC2O95298 119 aa13.21□□□□□ -0.29
SSPN-204ENST00000535504 S100A7L2Q5SY68 101 aa13.21□□□□□ -0.29
SSPN-204ENST00000535504 COPS9Q8WXC6 57 aa13.21□□□□□ -0.29
SSPN-204ENST00000535504 RPL13AP40429 203 aaKnown RBP13.2□□□□□ -0.3
SSPN-204ENST00000535504 NPC2P61916 151 aa13.2□□□□□ -0.3
SSPN-204ENST00000535504 CBY1Q9Y3M2 126 aa13.2□□□□□ -0.3
SSPN-204ENST00000535504 DDTP30046 118 aa13.18□□□□□ -0.3
SSPN-204ENST00000535504 PRLHP81277 87 aa13.18□□□□□ -0.3
SSPN-204ENST00000535504 TRBV10-3A0A0K0K1G6 114 aa13.17□□□□□ -0.3
SSPN-204ENST00000535504 ETDCA0A1B0GVM5 59 aa13.17□□□□□ -0.3
SSPN-204ENST00000535504 KRTAP10-8P60410 259 aa13.16□□□□□ -0.3
SSPN-204ENST00000535504 ANKRD39Q53RE8 183 aa13.16□□□□□ -0.3
SSPN-204ENST00000535504 ADAMTSL4-AS1Q5T5F5 129 aa13.16□□□□□ -0.3
SSPN-204ENST00000535504 KCNQ1DNQ9H478 68 aa13.16□□□□□ -0.3
SSPN-204ENST00000535504 PRR26Q8N8Z3 221 aa13.15□□□□□ -0.3
SSPN-204ENST00000535504 TTTY13Q9BZ97 58 aa13.15□□□□□ -0.3
SSPN-204ENST00000535504 SCGB1D1O95968 90 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 KRTAP13-1Q8IUC0 172 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 LINC00308Q8TCZ7 52 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 HIGD2AQ9BW72 106 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 SPANXCQ9NY87 97 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 HERC1Q15751 4861 aa13.13□□□□□ -0.31
SSPN-204ENST00000535504 LINC00337Q8N6G1 96 aa13.13□□□□□ -0.31
SSPN-204ENST00000535504 C5orf52A6NGY3 159 aa13.12□□□□□ -0.31
SSPN-204ENST00000535504 KRTAP1-4P0C5Y4 121 aa13.12□□□□□ -0.31
SSPN-204ENST00000535504 CRYGAP11844 174 aa13.11□□□□□ -0.31
SSPN-204ENST00000535504 Q6ZVH6 145 aa13.11□□□□□ -0.31
SSPN-204ENST00000535504 LITAFQ99732 161 aa13.11□□□□□ -0.31
SSPN-204ENST00000535504 HINT1P49773 126 aaPredicted RBP13.1□□□□□ -0.31
SSPN-204ENST00000535504 SOSTDC1Q6X4U4 206 aa13.1□□□□□ -0.31
SSPN-204ENST00000535504 LINC00518Q8N0U6 118 aa13.1□□□□□ -0.31
SSPN-204ENST00000535504 OR13C6PQ8NH95 151 aa13.1□□□□□ -0.31
SSPN-204ENST00000535504 SPANXDQ9BXN6 97 aa13.1□□□□□ -0.31
SSPN-204ENST00000535504 ZNF706Q9Y5V0 76 aaPredicted RBP13.1□□□□□ -0.31
SSPN-204ENST00000535504 TRAV23DV6A0A075B6W5 121 aa13.08□□□□□ -0.32
SSPN-204ENST00000535504 IFITM1P13164 125 aa13.08□□□□□ -0.32
SSPN-204ENST00000535504 SPRR1AP35321 89 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms