RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 HERV-K104P63124 156 aa7.1□□□□□ -1.27
KNTC1-208ENST00000535410 CBLN2Q8IUK8 224 aa7.1□□□□□ -1.27
KNTC1-208ENST00000535410 TNXBP22105 4242 aa7.1□□□□□ -1.27
KNTC1-208ENST00000535410 IGKV2-28A0A075B6P5 120 aa7.09□□□□□ -1.27
KNTC1-208ENST00000535410 LEPROTL1O95214 131 aa7.09□□□□□ -1.27
KNTC1-208ENST00000535410 IGKV2D-28P01615 120 aa7.09□□□□□ -1.27
KNTC1-208ENST00000535410 TRGC2P03986 189 aa7.09□□□□□ -1.27
KNTC1-208ENST00000535410 VPREB1P12018 145 aa7.09□□□□□ -1.27
KNTC1-208ENST00000535410 MAP1LC3CQ9BXW4 147 aa7.09□□□□□ -1.27
KNTC1-208ENST00000535410 MYMXA0A1B0GTQ4 84 aa7.08□□□□□ -1.28
KNTC1-208ENST00000535410 HSPB8Q9UJY1 196 aa7.08□□□□□ -1.28
KNTC1-208ENST00000535410 PLNP26678 52 aa7.07□□□□□ -1.28
KNTC1-208ENST00000535410 MEIG1Q5JSS6 88 aa7.07□□□□□ -1.28
KNTC1-208ENST00000535410 FAM19A2Q8N3H0 131 aa7.07□□□□□ -1.28
KNTC1-208ENST00000535410 TYMSOSQ8TAI1 123 aa7.07□□□□□ -1.28
KNTC1-208ENST00000535410 M0R378 163 aa7.06□□□□□ -1.28
KNTC1-208ENST00000535410 S100A12P80511 92 aa7.06□□□□□ -1.28
KNTC1-208ENST00000535410 FAM229BQ4G0N7 80 aa7.06□□□□□ -1.28
KNTC1-208ENST00000535410 FAM19A1Q7Z5A9 133 aa7.06□□□□□ -1.28
KNTC1-208ENST00000535410 TMEM126AQ9H061 195 aa7.06□□□□□ -1.28
KNTC1-208ENST00000535410 H0Y8G0 127 aa7.05□□□□□ -1.28
KNTC1-208ENST00000535410 HERVK_113P61574 105 aa7.05□□□□□ -1.28
KNTC1-208ENST00000535410 KRTAP13-1Q8IUC0 172 aa7.05□□□□□ -1.28
KNTC1-208ENST00000535410 PLEKHB2Q96CS7 222 aa7.05□□□□□ -1.28
KNTC1-208ENST00000535410 NDUFA12Q9UI09 145 aa7.05□□□□□ -1.28
KNTC1-208ENST00000535410 IGKV2D-26A0A0A0MRZ7 120 aa7.04□□□□□ -1.28
KNTC1-208ENST00000535410 A0A0U1RRA0 63 aa7.04□□□□□ -1.28
KNTC1-208ENST00000535410 SCO1O75880 301 aa7.04□□□□□ -1.28
KNTC1-208ENST00000535410 SERF1AO75920 110 aa7.04□□□□□ -1.28
KNTC1-208ENST00000535410 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
KNTC1-208ENST00000535410 SMIM13P0DJ93 91 aa7.03□□□□□ -1.28
KNTC1-208ENST00000535410 CTAG1AP78358 180 aa7.03□□□□□ -1.28
KNTC1-208ENST00000535410 PRR4Q16378 134 aa7.03□□□□□ -1.28
KNTC1-208ENST00000535410 BOD1L2Q8IYS8 172 aa7.03□□□□□ -1.28
KNTC1-208ENST00000535410 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
KNTC1-208ENST00000535410 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
KNTC1-208ENST00000535410 LEPROTO15243 131 aa7.02□□□□□ -1.29
KNTC1-208ENST00000535410 DPM2O94777 84 aa7.02□□□□□ -1.29
KNTC1-208ENST00000535410 FABP4P15090 132 aa7.02□□□□□ -1.29
KNTC1-208ENST00000535410 NMUP48645 174 aa7.02□□□□□ -1.29
KNTC1-208ENST00000535410 SLC7A5P1Q8MH63 180 aa7.02□□□□□ -1.29
KNTC1-208ENST00000535410 ZNF706Q9Y5V0 76 aaPredicted RBP7.02□□□□□ -1.29
KNTC1-208ENST00000535410 A0A087X002 238 aa7.01□□□□□ -1.29
KNTC1-208ENST00000535410 COLCA2A8K830 154 aa7.01□□□□□ -1.29
KNTC1-208ENST00000535410 PRLHP81277 87 aa7.01□□□□□ -1.29
KNTC1-208ENST00000535410 MIR7-3HGQ8N6C7 128 aa7.01□□□□□ -1.29
KNTC1-208ENST00000535410 LRP2P98164 4655 aa7.01□□□□□ -1.29
KNTC1-208ENST00000535410 PRYO14603 147 aa7□□□□□ -1.29
KNTC1-208ENST00000535410 TSPAN13O95857 204 aa7□□□□□ -1.29
KNTC1-208ENST00000535410 IGKCP01834 107 aa7□□□□□ -1.29
KNTC1-208ENST00000535410 LGALS3P17931 250 aaKnown RBP7□□□□□ -1.29
KNTC1-208ENST00000535410 MIEN1Q9BRT3 115 aa7□□□□□ -1.29
KNTC1-208ENST00000535410 J3QQQ9 107 aa6.99□□□□□ -1.29
KNTC1-208ENST00000535410 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
KNTC1-208ENST00000535410 KCNQ1DNQ9H478 68 aa6.99□□□□□ -1.29
KNTC1-208ENST00000535410 ANAPC11Q9NYG5 84 aa6.99□□□□□ -1.29
KNTC1-208ENST00000535410 LOC107984156A0A0G2JMH3 177 aa6.98□□□□□ -1.29
KNTC1-208ENST00000535410 ETDCA0A1B0GVM5 59 aa6.98□□□□□ -1.29
KNTC1-208ENST00000535410 LINC00310P59036 64 aa6.98□□□□□ -1.29
KNTC1-208ENST00000535410 ARL17AQ8IVW1 177 aa6.98□□□□□ -1.29
KNTC1-208ENST00000535410 LINC00337Q8N6G1 96 aa6.98□□□□□ -1.29
KNTC1-208ENST00000535410 LINC00304Q8N9R0 145 aa6.98□□□□□ -1.29
KNTC1-208ENST00000535410 Q8NDZ9 215 aa6.98□□□□□ -1.29
KNTC1-208ENST00000535410 TRBV10-2A0A0K0K1G8 114 aa6.97□□□□□ -1.29
KNTC1-208ENST00000535410 NCR3O14931 201 aa6.97□□□□□ -1.29
KNTC1-208ENST00000535410 KRTAP13-2Q52LG2 175 aa6.96□□□□□ -1.3
KNTC1-208ENST00000535410 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.3
KNTC1-208ENST00000535410 CBY1Q9Y3M2 126 aa6.96□□□□□ -1.3
KNTC1-208ENST00000535410 SPRR1AP35321 89 aa6.95□□□□□ -1.3
KNTC1-208ENST00000535410 PMCHL2Q9BQD1 86 aa6.95□□□□□ -1.3
KNTC1-208ENST00000535410 SPANXB1Q9NS25 103 aaPredicted RBP6.95□□□□□ -1.3
KNTC1-208ENST00000535410 TRBV10-3A0A0K0K1G6 114 aa6.94□□□□□ -1.3
KNTC1-208ENST00000535410 NDUFC2O95298 119 aa6.94□□□□□ -1.3
KNTC1-208ENST00000535410 GHRHP01286 108 aa6.94□□□□□ -1.3
KNTC1-208ENST00000535410 DDTP30046 118 aa6.94□□□□□ -1.3
KNTC1-208ENST00000535410 TSPEAR-AS2P59090 65 aa6.94□□□□□ -1.3
KNTC1-208ENST00000535410 S100A7L2Q5SY68 101 aa6.94□□□□□ -1.3
KNTC1-208ENST00000535410 SPRR4Q96PI1 79 aa6.94□□□□□ -1.3
KNTC1-208ENST00000535410 RNF213Q63HN8 5207 aa6.93□□□□□ -1.3
KNTC1-208ENST00000535410 E9PLD3 99 aa6.93□□□□□ -1.3
KNTC1-208ENST00000535410 SYS1-DBNDD2H3BUS1 97 aa6.92□□□□□ -1.3
KNTC1-208ENST00000535410 JOSD1Q15040 202 aaPredicted RBP6.92□□□□□ -1.3
KNTC1-208ENST00000535410 DAND5Q8N907 189 aa6.92□□□□□ -1.3
KNTC1-208ENST00000535410 SMCR5Q8TEV8 140 aa6.92□□□□□ -1.3
KNTC1-208ENST00000535410 HIST1H2BKO60814 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST1H2BJP06899 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST1H2BOP23527 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST1H2BBP33778 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HINT1P49773 126 aaPredicted RBP6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST1H2BDP58876 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST1H2BCP62807 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST2H2BEQ16778 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.91□□□□□ -1.3
KNTC1-208ENST00000535410 PET117Q6UWS5 81 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST1H2BHQ93079 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST1H2BNQ99877 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 HIST1H2BMQ99879 126 aa6.91□□□□□ -1.3
KNTC1-208ENST00000535410 KRTAP4-16G5E9R7 235 aaPredicted RBP6.9□□□□□ -1.3
KNTC1-208ENST00000535410 A0A0J9YXY3 114 aa6.89□□□□□ -1.31
KNTC1-208ENST00000535410 AKR1D1P51857 326 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms