RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RPL28P46779 137 aaKnown RBP8.33□□□□□ -1.08
SCARB1-204ENST00000535005 NPC2P61916 151 aa8.33□□□□□ -1.08
SCARB1-204ENST00000535005 LINC01556Q5JQF7 62 aa8.33□□□□□ -1.08
SCARB1-204ENST00000535005 SMCR5Q8TEV8 140 aa8.33□□□□□ -1.08
SCARB1-204ENST00000535005 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
SCARB1-204ENST00000535005 LINC00476Q8WZB0 136 aa8.32□□□□□ -1.08
SCARB1-204ENST00000535005 SMIM1B2RUZ4 78 aa8.31□□□□□ -1.08
SCARB1-204ENST00000535005 RNASE13Q5GAN3 156 aaKnown RBP8.31□□□□□ -1.08
SCARB1-204ENST00000535005 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
SCARB1-204ENST00000535005 MALP21145 153 aa8.31□□□□□ -1.08
SCARB1-204ENST00000535005 H0YGX0 51 aa8.3□□□□□ -1.08
SCARB1-204ENST00000535005 Q6JHZ5 121 aa8.3□□□□□ -1.08
SCARB1-204ENST00000535005 Q8N3U1 123 aa8.3□□□□□ -1.08
SCARB1-204ENST00000535005 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
SCARB1-204ENST00000535005 IGLV4-60A0A075B6I1 120 aa8.29□□□□□ -1.08
SCARB1-204ENST00000535005 SOSTDC1Q6X4U4 206 aa8.29□□□□□ -1.08
SCARB1-204ENST00000535005 LY6G6CO95867 125 aa8.29□□□□□ -1.08
SCARB1-204ENST00000535005 CRPP02741 224 aa8.29□□□□□ -1.08
SCARB1-204ENST00000535005 OBSCN-AS1Q96MR7 158 aa8.29□□□□□ -1.08
SCARB1-204ENST00000535005 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
SCARB1-204ENST00000535005 DNAL4O96015 105 aa8.28□□□□□ -1.08
SCARB1-204ENST00000535005 GAGE2AQ6NT46 116 aa8.28□□□□□ -1.08
SCARB1-204ENST00000535005 C2orf48Q96LS8 159 aa8.28□□□□□ -1.08
SCARB1-204ENST00000535005 LYSTQ99698 3801 aa8.28□□□□□ -1.08
SCARB1-204ENST00000535005 DNAH6Q9C0G6 4158 aa8.28□□□□□ -1.08
SCARB1-204ENST00000535005 COX6A2Q02221 97 aa8.27□□□□□ -1.09
SCARB1-204ENST00000535005 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.09
SCARB1-204ENST00000535005 PRR34Q9NV39 138 aa8.27□□□□□ -1.09
SCARB1-204ENST00000535005 NBDYA0A0U1RRE5 68 aa8.26□□□□□ -1.09
SCARB1-204ENST00000535005 IBA57-AS1B1ANH7 110 aa8.26□□□□□ -1.09
SCARB1-204ENST00000535005 ANGP03950 147 aaKnown RBP8.26□□□□□ -1.09
SCARB1-204ENST00000535005 TMEM258P61165 79 aa8.26□□□□□ -1.09
SCARB1-204ENST00000535005 KLK12Q9UKR0 248 aa8.26□□□□□ -1.09
SCARB1-204ENST00000535005 C5orf47Q569G3 176 aa8.26□□□□□ -1.09
SCARB1-204ENST00000535005 LCE6AA0A183 80 aa8.25□□□□□ -1.09
SCARB1-204ENST00000535005 LINC00269Q8N2A0 174 aa8.25□□□□□ -1.09
SCARB1-204ENST00000535005 OR13C6PQ8NH95 151 aa8.25□□□□□ -1.09
SCARB1-204ENST00000535005 S100A7L2Q5SY68 101 aa8.24□□□□□ -1.09
SCARB1-204ENST00000535005 ATP5EP2Q5VTU8 51 aa8.24□□□□□ -1.09
SCARB1-204ENST00000535005 ENHOQ6UWT2 76 aa8.24□□□□□ -1.09
SCARB1-204ENST00000535005 Q6ZR54 194 aa8.24□□□□□ -1.09
SCARB1-204ENST00000535005 SERP2Q8N6R1 65 aa8.24□□□□□ -1.09
SCARB1-204ENST00000535005 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
SCARB1-204ENST00000535005 SACSQ9NZJ4 4579 aa8.24□□□□□ -1.09
SCARB1-204ENST00000535005 REG3AQ06141 175 aa8.24□□□□□ -1.09
SCARB1-204ENST00000535005 FAM218AQ96MZ4 157 aa8.24□□□□□ -1.09
SCARB1-204ENST00000535005 LINC00959A0A1B0GUT2 108 aa8.22□□□□□ -1.09
SCARB1-204ENST00000535005 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
SCARB1-204ENST00000535005 COX7B2Q8TF08 81 aa8.21□□□□□ -1.1
SCARB1-204ENST00000535005 TRAV13-1A0A0B4J241 112 aa8.2□□□□□ -1.1
SCARB1-204ENST00000535005 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
SCARB1-204ENST00000535005 CLPSL2Q6UWE3 100 aa8.2□□□□□ -1.1
SCARB1-204ENST00000535005 SS18Q15532 418 aa8.19□□□□□ -1.1
SCARB1-204ENST00000535005 LINC00337Q8N6G1 96 aa8.19□□□□□ -1.1
SCARB1-204ENST00000535005 IGKV3OR2-268A0A0C4DH90 116 aa8.19□□□□□ -1.1
SCARB1-204ENST00000535005 M0R2N4 97 aa8.19□□□□□ -1.1
SCARB1-204ENST00000535005 SMIM11BQ8TCY0 68 aa8.19□□□□□ -1.1
SCARB1-204ENST00000535005 RMI2Q96E14 147 aa8.19□□□□□ -1.1
SCARB1-204ENST00000535005 KMT2AQ03164 3969 aa8.18□□□□□ -1.1
SCARB1-204ENST00000535005 IGKV2-28A0A075B6P5 120 aa8.18□□□□□ -1.1
SCARB1-204ENST00000535005 A0A0U1RRA0 63 aa8.18□□□□□ -1.1
SCARB1-204ENST00000535005 IGKV2D-28P01615 120 aa8.18□□□□□ -1.1
SCARB1-204ENST00000535005 KRTAP26-1Q6PEX3 210 aa8.18□□□□□ -1.1
SCARB1-204ENST00000535005 FAM19A5Q7Z5A7 132 aaPredicted RBP8.18□□□□□ -1.1
SCARB1-204ENST00000535005 MIR7-3HGQ8N6C7 128 aa8.18□□□□□ -1.1
SCARB1-204ENST00000535005 Q9HAA7 133 aa8.18□□□□□ -1.1
SCARB1-204ENST00000535005 JMJD7-PLA2G4BH0Y9G9 81 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 CHCHD10Q8WYQ3 142 aaPredicted RBP8.17□□□□□ -1.1
SCARB1-204ENST00000535005 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 C1orf43Q9BWL3 253 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 IGLV10-54A0A075B6I4 117 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 TRBV10-3A0A0K0K1G6 114 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 hADV29S1A0JD25 119 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 BCE1O60756 84 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 CD164L2Q6UWJ8 174 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 C6orf223Q8N319 242 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 ORMDL1Q9P0S3 153 aa8.17□□□□□ -1.1
SCARB1-204ENST00000535005 KMT2CQ8NEZ4 4911 aaKnown RBP8.16□□□□□ -1.1
SCARB1-204ENST00000535005 C14orf132Q9NPU4 83 aa8.16□□□□□ -1.1
SCARB1-204ENST00000535005 IGKV2D-24A0A075B6R9 120 aa8.15□□□□□ -1.1
SCARB1-204ENST00000535005 A0A087WYN8 130 aa8.15□□□□□ -1.1
SCARB1-204ENST00000535005 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
SCARB1-204ENST00000535005 USP17L23D6RBM5 183 aa8.15□□□□□ -1.1
SCARB1-204ENST00000535005 NDUFC2O95298 119 aa8.15□□□□□ -1.1
SCARB1-204ENST00000535005 CCKP06307 115 aa8.15□□□□□ -1.1
SCARB1-204ENST00000535005 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.1
SCARB1-204ENST00000535005 LINC00846Q9NV44 126 aa8.15□□□□□ -1.1
SCARB1-204ENST00000535005 DNAH2Q9P225 4427 aa8.15□□□□□ -1.1
SCARB1-204ENST00000535005 RYR2Q92736 4967 aa8.15□□□□□ -1.11
SCARB1-204ENST00000535005 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.11
SCARB1-204ENST00000535005 XCL1P47992 114 aa8.15□□□□□ -1.11
SCARB1-204ENST00000535005 LINC00158P58513 81 aa8.15□□□□□ -1.11
SCARB1-204ENST00000535005 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.11
SCARB1-204ENST00000535005 DPH3Q96FX2 82 aa8.15□□□□□ -1.11
SCARB1-204ENST00000535005 LINC01561Q8N1V8 128 aa8.14□□□□□ -1.11
SCARB1-204ENST00000535005 A0A087WZ39 114 aa8.13□□□□□ -1.11
SCARB1-204ENST00000535005 LOC107984640A0A0U1RRK4 108 aa8.13□□□□□ -1.11
SCARB1-204ENST00000535005 LECT2O14960 151 aa8.13□□□□□ -1.11
SCARB1-204ENST00000535005 IGKV3D-7A0A0C4DH55 119 aa8.12□□□□□ -1.11
SCARB1-204ENST00000535005 DNAH17Q9UFH2 4485 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms