RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 C22orf24Q9Y442 160 aa11.6□□□□□ -0.55
PACS1-215ENST00000534273 LINC01545Q5VT33 79 aa11.58□□□□□ -0.56
PACS1-215ENST00000534273 C20orf202A1L168 122 aa11.57□□□□□ -0.56
PACS1-215ENST00000534273 LBHQ53QV2 105 aaPredicted RBP11.57□□□□□ -0.56
PACS1-215ENST00000534273 TP73-AS1Q9UF72 201 aa11.57□□□□□ -0.56
PACS1-215ENST00000534273 TNXBP22105 4242 aa11.57□□□□□ -0.56
PACS1-215ENST00000534273 PLA2G2DQ9UNK4 145 aa11.56□□□□□ -0.56
PACS1-215ENST00000534273 TMEM223A0PJW6 202 aa11.55□□□□□ -0.56
PACS1-215ENST00000534273 S100A12P80511 92 aa11.55□□□□□ -0.56
PACS1-215ENST00000534273 PFN2P35080 140 aa11.54□□□□□ -0.56
PACS1-215ENST00000534273 KRTAP10-8P60410 259 aa11.54□□□□□ -0.56
PACS1-215ENST00000534273 MRPL55Q7Z7F7 128 aaKnown RBP11.54□□□□□ -0.56
PACS1-215ENST00000534273 DIRC1Q969H9 104 aa11.54□□□□□ -0.56
PACS1-215ENST00000534273 ZNF625Q96I27 306 aaPredicted RBP11.54□□□□□ -0.56
PACS1-215ENST00000534273 ERG28Q9UKR5 140 aa11.54□□□□□ -0.56
PACS1-215ENST00000534273 IGLV5-37A0A075B6J1 123 aa11.52□□□□□ -0.57
PACS1-215ENST00000534273 SFTA2Q6UW10 78 aa11.52□□□□□ -0.57
PACS1-215ENST00000534273 COX17Q14061 63 aa11.51□□□□□ -0.57
PACS1-215ENST00000534273 LINC00167Q96N53 147 aa11.51□□□□□ -0.57
PACS1-215ENST00000534273 HMCN2Q8NDA2 5059 aa11.51□□□□□ -0.57
PACS1-215ENST00000534273 H0Y9J4 135 aa11.5□□□□□ -0.57
PACS1-215ENST00000534273 SND1-IT1Q9HBX3 110 aa11.5□□□□□ -0.57
PACS1-215ENST00000534273 H0Y8G0 127 aa11.49□□□□□ -0.57
PACS1-215ENST00000534273 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
PACS1-215ENST00000534273 GAGE10A6NGK3 116 aa11.47□□□□□ -0.57
PACS1-215ENST00000534273 RPL37AP8A6NKH3 93 aa11.47□□□□□ -0.57
PACS1-215ENST00000534273 NKAPP1Q8N9T2 125 aa11.47□□□□□ -0.57
PACS1-215ENST00000534273 ZNF861PO60384 105 aa11.46□□□□□ -0.57
PACS1-215ENST00000534273 VPREB1P12018 145 aa11.45□□□□□ -0.58
PACS1-215ENST00000534273 BCE1O60756 84 aa11.44□□□□□ -0.58
PACS1-215ENST00000534273 DPM2O94777 84 aa11.44□□□□□ -0.58
PACS1-215ENST00000534273 PLNP26678 52 aa11.44□□□□□ -0.58
PACS1-215ENST00000534273 LINC00158P58513 81 aa11.44□□□□□ -0.58
PACS1-215ENST00000534273 PMCHL2Q9BQD1 86 aa11.44□□□□□ -0.58
PACS1-215ENST00000534273 ATOH7Q8N100 152 aa11.43□□□□□ -0.58
PACS1-215ENST00000534273 HSBP1L1C9JCN9 74 aa11.42□□□□□ -0.58
PACS1-215ENST00000534273 IGKCP01834 107 aa11.42□□□□□ -0.58
PACS1-215ENST00000534273 KRTAP1-4P0C5Y4 121 aa11.42□□□□□ -0.58
PACS1-215ENST00000534273 RPL24P83731 157 aaKnown RBP11.42□□□□□ -0.58
PACS1-215ENST00000534273 Q8NDZ9 215 aa11.42□□□□□ -0.58
PACS1-215ENST00000534273 PAM16Q9Y3D7 125 aa11.42□□□□□ -0.58
PACS1-215ENST00000534273 TSTD3H0UI37 97 aa11.41□□□□□ -0.58
PACS1-215ENST00000534273 SPATA45Q537H7 98 aa11.41□□□□□ -0.58
PACS1-215ENST00000534273 PRR26Q8N8Z3 221 aa11.41□□□□□ -0.58
PACS1-215ENST00000534273 NDUFA12Q9UI09 145 aa11.41□□□□□ -0.58
PACS1-215ENST00000534273 A0A0U1RRA0 63 aa11.4□□□□□ -0.58
PACS1-215ENST00000534273 SMIM13P0DJ93 91 aa11.4□□□□□ -0.58
PACS1-215ENST00000534273 HERV-K104P63124 156 aa11.4□□□□□ -0.58
PACS1-215ENST00000534273 LEPROTO15243 131 aa11.39□□□□□ -0.59
PACS1-215ENST00000534273 RPL28P46779 137 aaKnown RBP11.39□□□□□ -0.59
PACS1-215ENST00000534273 TSPEAR-AS2P59090 65 aa11.39□□□□□ -0.59
PACS1-215ENST00000534273 IGLV1-50A0A075B6I6 118 aa11.38□□□□□ -0.59
PACS1-215ENST00000534273 IGKV2-28A0A075B6P5 120 aa11.38□□□□□ -0.59
PACS1-215ENST00000534273 MYMXA0A1B0GTQ4 84 aa11.38□□□□□ -0.59
PACS1-215ENST00000534273 IGKV2D-28P01615 120 aa11.38□□□□□ -0.59
PACS1-215ENST00000534273 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
PACS1-215ENST00000534273 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
PACS1-215ENST00000534273 PRO1933Q9H354 126 aa11.37□□□□□ -0.59
PACS1-215ENST00000534273 LINC00587B1AMM8 73 aa11.36□□□□□ -0.59
PACS1-215ENST00000534273 KRTAP13-1Q8IUC0 172 aa11.36□□□□□ -0.59
PACS1-215ENST00000534273 J3QQQ9 107 aa11.35□□□□□ -0.59
PACS1-215ENST00000534273 HERVK_113P61574 105 aa11.35□□□□□ -0.59
PACS1-215ENST00000534273 MIR7-3HGQ8N6C7 128 aa11.35□□□□□ -0.59
PACS1-215ENST00000534273 MIEN1Q9BRT3 115 aa11.35□□□□□ -0.59
PACS1-215ENST00000534273 TMEM238C9JI98 176 aa11.33□□□□□ -0.6
PACS1-215ENST00000534273 UBE2AP49459 152 aa11.33□□□□□ -0.6
PACS1-215ENST00000534273 ANKRD39Q53RE8 183 aa11.33□□□□□ -0.6
PACS1-215ENST00000534273 UQCR10Q9UDW1 63 aa11.33□□□□□ -0.6
PACS1-215ENST00000534273 PCP4L1A6NKN8 68 aa11.32□□□□□ -0.6
PACS1-215ENST00000534273 M0R378 163 aa11.32□□□□□ -0.6
PACS1-215ENST00000534273 DDTP30046 118 aa11.32□□□□□ -0.6
PACS1-215ENST00000534273 BOD1L2Q8IYS8 172 aa11.32□□□□□ -0.6
PACS1-215ENST00000534273 TMEM126AQ9H061 195 aa11.32□□□□□ -0.6
PACS1-215ENST00000534273 COX8AP10176 69 aa11.31□□□□□ -0.6
PACS1-215ENST00000534273 LGALS3P17931 250 aaKnown RBP11.31□□□□□ -0.6
PACS1-215ENST00000534273 NMUP48645 174 aa11.31□□□□□ -0.6
PACS1-215ENST00000534273 DLEU1O43261 78 aa11.3□□□□□ -0.6
PACS1-215ENST00000534273 RPL13AP40429 203 aaKnown RBP11.3□□□□□ -0.6
PACS1-215ENST00000534273 E9PLD3 99 aa11.29□□□□□ -0.6
PACS1-215ENST00000534273 C14orf144Q96I85 54 aa11.29□□□□□ -0.6
PACS1-215ENST00000534273 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
PACS1-215ENST00000534273 FAM19A1Q7Z5A9 133 aa11.28□□□□□ -0.6
PACS1-215ENST00000534273 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.61
PACS1-215ENST00000534273 PRLHP81277 87 aa11.27□□□□□ -0.61
PACS1-215ENST00000534273 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.61
PACS1-215ENST00000534273 DAND5Q8N907 189 aa11.27□□□□□ -0.61
PACS1-215ENST00000534273 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
PACS1-215ENST00000534273 NCR3O14931 201 aa11.26□□□□□ -0.61
PACS1-215ENST00000534273 A0A087X002 238 aa11.24□□□□□ -0.61
PACS1-215ENST00000534273 A0A0J9YXY3 114 aa11.23□□□□□ -0.61
PACS1-215ENST00000534273 ANAPC11Q9NYG5 84 aa11.23□□□□□ -0.61
PACS1-215ENST00000534273 PRYO14603 147 aa11.22□□□□□ -0.61
PACS1-215ENST00000534273 CRYGAP11844 174 aa11.22□□□□□ -0.61
PACS1-215ENST00000534273 PCP2Q8IVA1 136 aa11.22□□□□□ -0.61
PACS1-215ENST00000534273 KCNQ1DNQ9H478 68 aa11.22□□□□□ -0.61
PACS1-215ENST00000534273 TRBV10-3A0A0K0K1G6 114 aa11.2□□□□□ -0.62
PACS1-215ENST00000534273 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
PACS1-215ENST00000534273 HIGD1BQ9P298 99 aa11.2□□□□□ -0.62
PACS1-215ENST00000534273 TRBV10-2A0A0K0K1G8 114 aa11.19□□□□□ -0.62
PACS1-215ENST00000534273 SPRR1AP35321 89 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms