RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 KRTDAPP60985 99 aa8.18□□□□□ -1.1
CMTM1-219ENST00000533953 SPINK6Q6UWN8 80 aa8.18□□□□□ -1.1
CMTM1-219ENST00000533953 J3QQQ9 107 aa8.17□□□□□ -1.1
CMTM1-219ENST00000533953 COX17Q14061 63 aa8.17□□□□□ -1.1
CMTM1-219ENST00000533953 LBHQ53QV2 105 aaPredicted RBP8.17□□□□□ -1.1
CMTM1-219ENST00000533953 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
CMTM1-219ENST00000533953 LINC01545Q5VT33 79 aa8.17□□□□□ -1.1
CMTM1-219ENST00000533953 PLEKHB2Q96CS7 222 aa8.17□□□□□ -1.1
CMTM1-219ENST00000533953 PLA2G2DQ9UNK4 145 aa8.17□□□□□ -1.1
CMTM1-219ENST00000533953 MT1HL1P0DM35 61 aa8.16□□□□□ -1.1
CMTM1-219ENST00000533953 VPREB1P12018 145 aa8.16□□□□□ -1.1
CMTM1-219ENST00000533953 HERVK_113P61574 105 aa8.16□□□□□ -1.1
CMTM1-219ENST00000533953 PET117Q6UWS5 81 aa8.16□□□□□ -1.1
CMTM1-219ENST00000533953 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
CMTM1-219ENST00000533953 MYMXA0A1B0GTQ4 84 aa8.15□□□□□ -1.1
CMTM1-219ENST00000533953 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
CMTM1-219ENST00000533953 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
CMTM1-219ENST00000533953 DAND5Q8N907 189 aa8.15□□□□□ -1.1
CMTM1-219ENST00000533953 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
CMTM1-219ENST00000533953 TP73-AS1Q9UF72 201 aa8.15□□□□□ -1.1
CMTM1-219ENST00000533953 LGALS3P17931 250 aaKnown RBP8.14□□□□□ -1.11
CMTM1-219ENST00000533953 HERV-K104P63124 156 aa8.14□□□□□ -1.11
CMTM1-219ENST00000533953 IGKV2-28A0A075B6P5 120 aa8.13□□□□□ -1.11
CMTM1-219ENST00000533953 IGKV2D-28P01615 120 aa8.13□□□□□ -1.11
CMTM1-219ENST00000533953 IGKV2D-26A0A0A0MRZ7 120 aa8.12□□□□□ -1.11
CMTM1-219ENST00000533953 E9PLD3 99 aa8.12□□□□□ -1.11
CMTM1-219ENST00000533953 ATOH7Q8N100 152 aa8.12□□□□□ -1.11
CMTM1-219ENST00000533953 HIST3H2BBQ8N257 126 aa8.12□□□□□ -1.11
CMTM1-219ENST00000533953 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
CMTM1-219ENST00000533953 RPL24P83731 157 aaKnown RBP8.11□□□□□ -1.11
CMTM1-219ENST00000533953 BOD1L2Q8IYS8 172 aa8.11□□□□□ -1.11
CMTM1-219ENST00000533953 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
CMTM1-219ENST00000533953 TMEM238C9JI98 176 aa8.1□□□□□ -1.11
CMTM1-219ENST00000533953 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
CMTM1-219ENST00000533953 REG3GQ6UW15 175 aa8.1□□□□□ -1.11
CMTM1-219ENST00000533953 IGLV1-50A0A075B6I6 118 aa8.09□□□□□ -1.11
CMTM1-219ENST00000533953 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
CMTM1-219ENST00000533953 H0Y9J4 135 aa8.09□□□□□ -1.11
CMTM1-219ENST00000533953 NCR3O14931 201 aa8.09□□□□□ -1.11
CMTM1-219ENST00000533953 EIF4EBP3O60516 100 aaPredicted RBP8.09□□□□□ -1.11
CMTM1-219ENST00000533953 BCE1O60756 84 aa8.09□□□□□ -1.11
CMTM1-219ENST00000533953 NPC2P61916 151 aa8.09□□□□□ -1.11
CMTM1-219ENST00000533953 DIRC1Q969H9 104 aa8.09□□□□□ -1.11
CMTM1-219ENST00000533953 HIST1H2BLQ99880 126 aa8.09□□□□□ -1.11
CMTM1-219ENST00000533953 ZNF861PO60384 105 aa8.08□□□□□ -1.12
CMTM1-219ENST00000533953 NMUP48645 174 aa8.08□□□□□ -1.12
CMTM1-219ENST00000533953 SNRPEP62304 92 aaKnown RBP8.08□□□□□ -1.12
CMTM1-219ENST00000533953 ANKRD39Q53RE8 183 aa8.08□□□□□ -1.12
CMTM1-219ENST00000533953 LINC00587B1AMM8 73 aa8.07□□□□□ -1.12
CMTM1-219ENST00000533953 S100A2P29034 98 aa8.07□□□□□ -1.12
CMTM1-219ENST00000533953 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
CMTM1-219ENST00000533953 M0R378 163 aa8.06□□□□□ -1.12
CMTM1-219ENST00000533953 S100A6P06703 90 aa8.06□□□□□ -1.12
CMTM1-219ENST00000533953 SOSTDC1Q6X4U4 206 aa8.06□□□□□ -1.12
CMTM1-219ENST00000533953 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
CMTM1-219ENST00000533953 C20orf202A1L168 122 aa8.05□□□□□ -1.12
CMTM1-219ENST00000533953 ZNF815PA8K554 130 aa8.05□□□□□ -1.12
CMTM1-219ENST00000533953 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
CMTM1-219ENST00000533953 PRLHP81277 87 aa8.05□□□□□ -1.12
CMTM1-219ENST00000533953 TMEM126AQ9H061 195 aa8.05□□□□□ -1.12
CMTM1-219ENST00000533953 UBE2AP49459 152 aa8.04□□□□□ -1.12
CMTM1-219ENST00000533953 LITAFQ99732 161 aa8.04□□□□□ -1.12
CMTM1-219ENST00000533953 RPL28P46779 137 aaKnown RBP8.03□□□□□ -1.12
CMTM1-219ENST00000533953 FAM19A1Q7Z5A9 133 aa8.03□□□□□ -1.12
CMTM1-219ENST00000533953 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
CMTM1-219ENST00000533953 ANAPC11Q9NYG5 84 aa8.03□□□□□ -1.12
CMTM1-219ENST00000533953 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
CMTM1-219ENST00000533953 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
CMTM1-219ENST00000533953 PCP2Q8IVA1 136 aa8.02□□□□□ -1.13
CMTM1-219ENST00000533953 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.13
CMTM1-219ENST00000533953 TNXBP22105 4242 aa8.02□□□□□ -1.13
CMTM1-219ENST00000533953 C5orf52A6NGY3 159 aa8.01□□□□□ -1.13
CMTM1-219ENST00000533953 MIEN1Q9BRT3 115 aa8□□□□□ -1.13
CMTM1-219ENST00000533953 LINC00308Q8TCZ7 52 aa7.99□□□□□ -1.13
CMTM1-219ENST00000533953 TIMM17BO60830 172 aa7.97□□□□□ -1.13
CMTM1-219ENST00000533953 DDTP30046 118 aa7.97□□□□□ -1.13
CMTM1-219ENST00000533953 SCGB1D4Q6XE38 83 aa7.97□□□□□ -1.13
CMTM1-219ENST00000533953 HIGD2AQ9BW72 106 aa7.97□□□□□ -1.13
CMTM1-219ENST00000533953 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
CMTM1-219ENST00000533953 A0A087X002 238 aa7.96□□□□□ -1.14
CMTM1-219ENST00000533953 PRYO14603 147 aa7.96□□□□□ -1.14
CMTM1-219ENST00000533953 SCGB1D1O95968 90 aa7.96□□□□□ -1.14
CMTM1-219ENST00000533953 SPANXB1Q9NS25 103 aaPredicted RBP7.96□□□□□ -1.14
CMTM1-219ENST00000533953 TRBV10-2A0A0K0K1G8 114 aa7.95□□□□□ -1.14
CMTM1-219ENST00000533953 NDUFC2O95298 119 aa7.95□□□□□ -1.14
CMTM1-219ENST00000533953 SPRR1AP35321 89 aa7.95□□□□□ -1.14
CMTM1-219ENST00000533953 KRTAP4-16G5E9R7 235 aaPredicted RBP7.94□□□□□ -1.14
CMTM1-219ENST00000533953 S100A7L2Q5SY68 101 aa7.94□□□□□ -1.14
CMTM1-219ENST00000533953 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
CMTM1-219ENST00000533953 ETDCA0A1B0GVM5 59 aa7.93□□□□□ -1.14
CMTM1-219ENST00000533953 IGLV6-57P01721 117 aa7.93□□□□□ -1.14
CMTM1-219ENST00000533953 AKR1D1P51857 326 aa7.92□□□□□ -1.14
CMTM1-219ENST00000533953 MUSTN1Q8IVN3 82 aa7.92□□□□□ -1.14
CMTM1-219ENST00000533953 LINC00337Q8N6G1 96 aa7.92□□□□□ -1.14
CMTM1-219ENST00000533953 OR13C6PQ8NH95 151 aa7.92□□□□□ -1.14
CMTM1-219ENST00000533953 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
CMTM1-219ENST00000533953 SPANXCQ9NY87 97 aa7.92□□□□□ -1.14
CMTM1-219ENST00000533953 B5MCH6 92 aa7.91□□□□□ -1.14
CMTM1-219ENST00000533953 HSBP1L1C9JCN9 74 aa7.91□□□□□ -1.14
CMTM1-219ENST00000533953 KRTAP13-2Q52LG2 175 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms