RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 PPDPFQ9H3Y8 114 aa9.79□□□□□ -0.84
CTTN-215ENST00000533931 A0A0U1RRA0 63 aa9.78□□□□□ -0.84
CTTN-215ENST00000533931 FAM168BA1KXE4 195 aa9.78□□□□□ -0.84
CTTN-215ENST00000533931 COX8AP10176 69 aa9.78□□□□□ -0.84
CTTN-215ENST00000533931 HAMPP81172 84 aa9.78□□□□□ -0.84
CTTN-215ENST00000533931 FAM19A5Q7Z5A7 132 aaPredicted RBP9.78□□□□□ -0.84
CTTN-215ENST00000533931 KRTAP7-1Q8IUC3 87 aa9.78□□□□□ -0.84
CTTN-215ENST00000533931 BOD1L2Q8IYS8 172 aa9.78□□□□□ -0.84
CTTN-215ENST00000533931 M0QXV9 152 aa9.77□□□□□ -0.85
CTTN-215ENST00000533931 SPATA45Q537H7 98 aa9.77□□□□□ -0.85
CTTN-215ENST00000533931 LBHQ53QV2 105 aaPredicted RBP9.77□□□□□ -0.85
CTTN-215ENST00000533931 SERTAD4-AS1Q5TG53 156 aa9.77□□□□□ -0.85
CTTN-215ENST00000533931 Q8N1X5 172 aa9.77□□□□□ -0.85
CTTN-215ENST00000533931 COPS9Q8WXC6 57 aa9.77□□□□□ -0.85
CTTN-215ENST00000533931 MIEN1Q9BRT3 115 aa9.77□□□□□ -0.85
CTTN-215ENST00000533931 SPANXDQ9BXN6 97 aa9.77□□□□□ -0.85
CTTN-215ENST00000533931 SPANXCQ9NY87 97 aa9.77□□□□□ -0.85
CTTN-215ENST00000533931 PAM16Q9Y3D7 125 aa9.77□□□□□ -0.85
CTTN-215ENST00000533931 VPREB1P12018 145 aa9.76□□□□□ -0.85
CTTN-215ENST00000533931 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
CTTN-215ENST00000533931 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
CTTN-215ENST00000533931 FAM229AH3BQW9 127 aa9.75□□□□□ -0.85
CTTN-215ENST00000533931 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
CTTN-215ENST00000533931 HSPG2P98160 4391 aa9.75□□□□□ -0.85
CTTN-215ENST00000533931 NDUFC2O95298 119 aa9.74□□□□□ -0.85
CTTN-215ENST00000533931 SMIM6P0DI80 62 aa9.74□□□□□ -0.85
CTTN-215ENST00000533931 IFITM1P13164 125 aa9.74□□□□□ -0.85
CTTN-215ENST00000533931 MRPL55Q7Z7F7 128 aaKnown RBP9.74□□□□□ -0.85
CTTN-215ENST00000533931 NKAPP1Q8N9T2 125 aa9.74□□□□□ -0.85
CTTN-215ENST00000533931 SPANXB1Q9NS25 103 aaPredicted RBP9.74□□□□□ -0.85
CTTN-215ENST00000533931 S100A12P80511 92 aa9.73□□□□□ -0.85
CTTN-215ENST00000533931 DAND5Q8N907 189 aa9.73□□□□□ -0.85
CTTN-215ENST00000533931 LINC00308Q8TCZ7 52 aa9.73□□□□□ -0.85
CTTN-215ENST00000533931 SMR3BP02814 79 aaPredicted RBP9.72□□□□□ -0.85
CTTN-215ENST00000533931 PLA2G1BP04054 148 aaKnown RBP9.72□□□□□ -0.85
CTTN-215ENST00000533931 PHF5AQ7RTV0 110 aaKnown RBP9.72□□□□□ -0.85
CTTN-215ENST00000533931 HERC2O95714 4834 aa9.71□□□□□ -0.85
CTTN-215ENST00000533931 TRBV10-2A0A0K0K1G8 114 aa9.71□□□□□ -0.86
CTTN-215ENST00000533931 LOC105371267A0A1B0GV96 52 aa9.71□□□□□ -0.86
CTTN-215ENST00000533931 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.86
CTTN-215ENST00000533931 M0R378 163 aa9.7□□□□□ -0.86
CTTN-215ENST00000533931 SOSTDC1Q6X4U4 206 aa9.7□□□□□ -0.86
CTTN-215ENST00000533931 Q8NDZ9 215 aa9.7□□□□□ -0.86
CTTN-215ENST00000533931 HIGD1BQ9P298 99 aa9.7□□□□□ -0.86
CTTN-215ENST00000533931 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
CTTN-215ENST00000533931 Q5VSD8 79 aa9.69□□□□□ -0.86
CTTN-215ENST00000533931 C14orf144Q96I85 54 aa9.69□□□□□ -0.86
CTTN-215ENST00000533931 UBE2BP63146 152 aa9.68□□□□□ -0.86
CTTN-215ENST00000533931 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
CTTN-215ENST00000533931 PRR3P79522 188 aaKnown RBP9.67□□□□□ -0.86
CTTN-215ENST00000533931 EIF4EBP3O60516 100 aaPredicted RBP9.66□□□□□ -0.86
CTTN-215ENST00000533931 KRTAP10-4P60372 401 aaPredicted RBP9.66□□□□□ -0.86
CTTN-215ENST00000533931 SRSF9Q13242 221 aaKnown RBP eCLIP9.66□□□□□ -0.86
CTTN-215ENST00000533931 LINC00518Q8N0U6 118 aa9.66□□□□□ -0.86
CTTN-215ENST00000533931 IGLV1-50A0A075B6I6 118 aa9.65□□□□□ -0.86
CTTN-215ENST00000533931 NPC2P61916 151 aa9.65□□□□□ -0.86
CTTN-215ENST00000533931 PSORS1C2Q9UIG4 136 aa9.65□□□□□ -0.86
CTTN-215ENST00000533931 C2orf91Q6ZV80 131 aa9.64□□□□□ -0.87
CTTN-215ENST00000533931 KRTAP17-1Q9BYP8 105 aa9.64□□□□□ -0.87
CTTN-215ENST00000533931 CBY1Q9Y3M2 126 aa9.64□□□□□ -0.87
CTTN-215ENST00000533931 SRRM2Q9UQ35 2752 aaKnown RBP9.63□□□□□ -0.87
CTTN-215ENST00000533931 GAGE10A6NGK3 116 aa9.63□□□□□ -0.87
CTTN-215ENST00000533931 NCR3O14931 201 aa9.63□□□□□ -0.87
CTTN-215ENST00000533931 TAL2Q16559 108 aa9.63□□□□□ -0.87
CTTN-215ENST00000533931 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
CTTN-215ENST00000533931 MUSTN1Q8IVN3 82 aa9.63□□□□□ -0.87
CTTN-215ENST00000533931 UQCR10Q9UDW1 63 aa9.63□□□□□ -0.87
CTTN-215ENST00000533931 HIST1H4GQ99525 98 aa9.62□□□□□ -0.87
CTTN-215ENST00000533931 FAT1Q14517 4588 aa9.61□□□□□ -0.87
CTTN-215ENST00000533931 VPS13BQ7Z7G8 4022 aa9.61□□□□□ -0.87
CTTN-215ENST00000533931 RPL37AP8A6NKH3 93 aa9.61□□□□□ -0.87
CTTN-215ENST00000533931 PRYO14603 147 aa9.61□□□□□ -0.87
CTTN-215ENST00000533931 IGLV6-57P01721 117 aa9.61□□□□□ -0.87
CTTN-215ENST00000533931 KCNQ1DNQ9H478 68 aa9.61□□□□□ -0.87
CTTN-215ENST00000533931 IGKV2-28A0A075B6P5 120 aa9.6□□□□□ -0.87
CTTN-215ENST00000533931 IGKV2D-28P01615 120 aa9.6□□□□□ -0.87
CTTN-215ENST00000533931 DDTP30046 118 aa9.6□□□□□ -0.87
CTTN-215ENST00000533931 C1orf137Q5JT78 98 aa9.6□□□□□ -0.87
CTTN-215ENST00000533931 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
CTTN-215ENST00000533931 BCE1O60756 84 aa9.59□□□□□ -0.87
CTTN-215ENST00000533931 S100A7L2Q5SY68 101 aa9.59□□□□□ -0.87
CTTN-215ENST00000533931 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
CTTN-215ENST00000533931 IGLV7-43P04211 117 aa9.58□□□□□ -0.88
CTTN-215ENST00000533931 REG3GQ6UW15 175 aa9.58□□□□□ -0.88
CTTN-215ENST00000533931 SPRR1AP35321 89 aa9.57□□□□□ -0.88
CTTN-215ENST00000533931 TRAV13-2A0A0B4J235 113 aa9.56□□□□□ -0.88
CTTN-215ENST00000533931 A4D1N5 150 aa9.56□□□□□ -0.88
CTTN-215ENST00000533931 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
CTTN-215ENST00000533931 LINC00337Q8N6G1 96 aa9.56□□□□□ -0.88
CTTN-215ENST00000533931 C12orf57Q99622 126 aa9.56□□□□□ -0.88
CTTN-215ENST00000533931 H0Y9J4 135 aa9.55□□□□□ -0.88
CTTN-215ENST00000533931 HSD52Q0P140 79 aa9.55□□□□□ -0.88
CTTN-215ENST00000533931 TRAV23DV6A0A075B6W5 121 aa9.54□□□□□ -0.88
CTTN-215ENST00000533931 TMEM238LA0A1B0GVL6 79 aa9.54□□□□□ -0.88
CTTN-215ENST00000533931 A6NJY4 79 aa9.54□□□□□ -0.88
CTTN-215ENST00000533931 RPL28P46779 137 aaKnown RBP9.54□□□□□ -0.88
CTTN-215ENST00000533931 CEND1Q8N111 149 aa9.54□□□□□ -0.88
CTTN-215ENST00000533931 KRTAP4-5Q9BYR2 181 aa9.54□□□□□ -0.88
CTTN-215ENST00000533931 KRTAP4-16G5E9R7 235 aaPredicted RBP9.53□□□□□ -0.88
CTTN-215ENST00000533931 ZNF861PO60384 105 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms