RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 IGIPA6NJ69 53 aa6.67□□□□□ -1.34
SVIP-205ENST00000533774 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
SVIP-205ENST00000533774 TRIAP1O43715 76 aa6.66□□□□□ -1.34
SVIP-205ENST00000533774 HERVK_113P63121 156 aa6.66□□□□□ -1.34
SVIP-205ENST00000533774 MRPL54Q6P161 138 aaKnown RBP6.66□□□□□ -1.34
SVIP-205ENST00000533774 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
SVIP-205ENST00000533774 LOC389332A0A1B0GUA5 103 aa6.65□□□□□ -1.34
SVIP-205ENST00000533774 A0A1B0GXF2 115 aa6.65□□□□□ -1.34
SVIP-205ENST00000533774 SNAPINO95295 136 aa6.65□□□□□ -1.34
SVIP-205ENST00000533774 RAB14P61106 215 aa6.65□□□□□ -1.34
SVIP-205ENST00000533774 PRELID3AQ96N28 172 aa6.65□□□□□ -1.34
SVIP-205ENST00000533774 CYSLTR1Q9Y271 337 aa6.65□□□□□ -1.34
SVIP-205ENST00000533774 A0A1B0GW15 77 aa6.64□□□□□ -1.35
SVIP-205ENST00000533774 PPBPP02775 128 aa6.64□□□□□ -1.35
SVIP-205ENST00000533774 PCP4P48539 62 aa6.64□□□□□ -1.35
SVIP-205ENST00000533774 PDZD11Q5EBL8 140 aa6.64□□□□□ -1.35
SVIP-205ENST00000533774 TMEM136Q6ZRR5 245 aa6.64□□□□□ -1.35
SVIP-205ENST00000533774 GEMIN7Q9H840 131 aaKnown RBP6.64□□□□□ -1.35
SVIP-205ENST00000533774 SRP19P09132 144 aaKnown RBP6.63□□□□□ -1.35
SVIP-205ENST00000533774 RPL23P62829 140 aaKnown RBP6.63□□□□□ -1.35
SVIP-205ENST00000533774 ORMDL3Q8N138 153 aa6.63□□□□□ -1.35
SVIP-205ENST00000533774 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
SVIP-205ENST00000533774 KRTAP4-16G5E9R7 235 aaPredicted RBP6.62□□□□□ -1.35
SVIP-205ENST00000533774 SLC25A20O43772 301 aa6.62□□□□□ -1.35
SVIP-205ENST00000533774 PFN2P35080 140 aa6.62□□□□□ -1.35
SVIP-205ENST00000533774 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
SVIP-205ENST00000533774 FAM19A2Q8N3H0 131 aa6.62□□□□□ -1.35
SVIP-205ENST00000533774 SND1-IT1Q9HBX3 110 aa6.62□□□□□ -1.35
SVIP-205ENST00000533774 F8W036 122 aa6.61□□□□□ -1.35
SVIP-205ENST00000533774 NPSP0C0P6 89 aa6.61□□□□□ -1.35
SVIP-205ENST00000533774 SPINK8P0C7L1 97 aa6.61□□□□□ -1.35
SVIP-205ENST00000533774 SEC11AP67812 179 aa6.61□□□□□ -1.35
SVIP-205ENST00000533774 ZNF706Q9Y5V0 76 aaPredicted RBP6.61□□□□□ -1.35
SVIP-205ENST00000533774 IGLV5-45A0A087WSX0 123 aa6.6□□□□□ -1.35
SVIP-205ENST00000533774 MOBPQ13875 183 aa6.6□□□□□ -1.35
SVIP-205ENST00000533774 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
SVIP-205ENST00000533774 Q8N8P6 123 aa6.6□□□□□ -1.35
SVIP-205ENST00000533774 SMCR5Q8TEV8 140 aa6.6□□□□□ -1.35
SVIP-205ENST00000533774 ADIRFQ15847 76 aa6.59□□□□□ -1.35
SVIP-205ENST00000533774 IGLV9-49A0A0B4J1Y8 123 aa6.58□□□□□ -1.36
SVIP-205ENST00000533774 C9orf92A6NGG3 77 aa6.58□□□□□ -1.36
SVIP-205ENST00000533774 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
SVIP-205ENST00000533774 ALKAL2Q6UX46 152 aa6.58□□□□□ -1.36
SVIP-205ENST00000533774 MAP1LC3AQ9H492 121 aa6.58□□□□□ -1.36
SVIP-205ENST00000533774 TINCRA0A1B0GVN0 87 aa6.57□□□□□ -1.36
SVIP-205ENST00000533774 S100A8P05109 93 aa6.57□□□□□ -1.36
SVIP-205ENST00000533774 RPL24P83731 157 aaKnown RBP6.57□□□□□ -1.36
SVIP-205ENST00000533774 ORMDL2Q53FV1 153 aa6.56□□□□□ -1.36
SVIP-205ENST00000533774 GAGE2AQ6NT46 116 aa6.56□□□□□ -1.36
SVIP-205ENST00000533774 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
SVIP-205ENST00000533774 SSBP3-AS1Q7Z2R9 100 aa6.56□□□□□ -1.36
SVIP-205ENST00000533774 TIMM17AQ99595 171 aa6.56□□□□□ -1.36
SVIP-205ENST00000533774 C9JQL5 133 aa6.55□□□□□ -1.36
SVIP-205ENST00000533774 ATP5LO75964 103 aa6.55□□□□□ -1.36
SVIP-205ENST00000533774 ADCYAP1P18509 176 aa6.55□□□□□ -1.36
SVIP-205ENST00000533774 TOMM6Q96B49 74 aa6.55□□□□□ -1.36
SVIP-205ENST00000533774 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
SVIP-205ENST00000533774 ERG28Q9UKR5 140 aa6.55□□□□□ -1.36
SVIP-205ENST00000533774 ERC2-IT1O76042 136 aa6.54□□□□□ -1.36
SVIP-205ENST00000533774 SPRR1AP35321 89 aa6.54□□□□□ -1.36
SVIP-205ENST00000533774 PAPPA-AS1Q5QFB9 102 aa6.54□□□□□ -1.36
SVIP-205ENST00000533774 LAMTOR2Q9Y2Q5 125 aa6.54□□□□□ -1.36
SVIP-205ENST00000533774 ZNF625Q96I27 306 aaPredicted RBP6.53□□□□□ -1.36
SVIP-205ENST00000533774 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
SVIP-205ENST00000533774 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
SVIP-205ENST00000533774 H0Y8G0 127 aa6.52□□□□□ -1.37
SVIP-205ENST00000533774 LINC00518Q8N0U6 118 aa6.52□□□□□ -1.37
SVIP-205ENST00000533774 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
SVIP-205ENST00000533774 PRYO14603 147 aa6.51□□□□□ -1.37
SVIP-205ENST00000533774 ERASQ7Z444 233 aa6.51□□□□□ -1.37
SVIP-205ENST00000533774 ATP5L2Q7Z4Y8 100 aa6.51□□□□□ -1.37
SVIP-205ENST00000533774 CST9LQ9H4G1 147 aa6.51□□□□□ -1.37
SVIP-205ENST00000533774 K7EMI3 77 aa6.5□□□□□ -1.37
SVIP-205ENST00000533774 SCGB3A1Q96QR1 104 aa6.5□□□□□ -1.37
SVIP-205ENST00000533774 COX17Q14061 63 aa6.49□□□□□ -1.37
SVIP-205ENST00000533774 TCTE3Q8IZS6 198 aa6.49□□□□□ -1.37
SVIP-205ENST00000533774 KCNQ1DNQ9H478 68 aa6.49□□□□□ -1.37
SVIP-205ENST00000533774 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
SVIP-205ENST00000533774 NXT2Q9NPJ8 142 aaKnown RBP6.48□□□□□ -1.37
SVIP-205ENST00000533774 ETDCA0A1B0GVM5 59 aa6.47□□□□□ -1.37
SVIP-205ENST00000533774 Q9BRP9 147 aa6.47□□□□□ -1.37
SVIP-205ENST00000533774 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
SVIP-205ENST00000533774 NCR3O14931 201 aa6.46□□□□□ -1.38
SVIP-205ENST00000533774 IGLV6-57P01721 117 aa6.46□□□□□ -1.38
SVIP-205ENST00000533774 H3BRM9 83 aa6.45□□□□□ -1.38
SVIP-205ENST00000533774 SCGB1D1O95968 90 aa6.45□□□□□ -1.38
SVIP-205ENST00000533774 CFC1P0CG37 223 aa6.45□□□□□ -1.38
SVIP-205ENST00000533774 ZNF22P17026 224 aaPredicted RBP6.45□□□□□ -1.38
SVIP-205ENST00000533774 TRBV10-3A0A0K0K1G6 114 aa6.44□□□□□ -1.38
SVIP-205ENST00000533774 A0A0U1RRA0 63 aa6.44□□□□□ -1.38
SVIP-205ENST00000533774 IGLC3P0DOY3 106 aa6.44□□□□□ -1.38
SVIP-205ENST00000533774 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
SVIP-205ENST00000533774 PMVKQ15126 192 aa6.44□□□□□ -1.38
SVIP-205ENST00000533774 C9orf153Q5TBE3 101 aa6.44□□□□□ -1.38
SVIP-205ENST00000533774 G0S2P27469 103 aa6.43□□□□□ -1.38
SVIP-205ENST00000533774 LINC00158P58513 81 aa6.43□□□□□ -1.38
SVIP-205ENST00000533774 KIAA1644Q3SXP7 199 aa6.42□□□□□ -1.38
SVIP-205ENST00000533774 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
SVIP-205ENST00000533774 HRCT1Q6UXD1 115 aa6.42□□□□□ -1.38
SVIP-205ENST00000533774 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms