RNA–Protein interactions for RNA: ENST00000533688.5

PDZD3-213, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-213ENST00000533688 SND1-IT1Q9HBX3 110 aa9.37□□□□□ -0.91
PDZD3-213ENST00000533688 PMVKQ15126 192 aa9.36□□□□□ -0.91
PDZD3-213ENST00000533688 PLEKHB2Q96CS7 222 aa9.36□□□□□ -0.91
PDZD3-213ENST00000533688 HIGD2AQ9BW72 106 aa9.36□□□□□ -0.91
PDZD3-213ENST00000533688 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
PDZD3-213ENST00000533688 CTAG1AP78358 180 aa9.35□□□□□ -0.91
PDZD3-213ENST00000533688 ERG28Q9UKR5 140 aa9.35□□□□□ -0.91
PDZD3-213ENST00000533688 HIST1H2BKO60814 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST1H2BJP06899 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST1H2BOP23527 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST1H2BBP33778 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST1H2BDP58876 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST1H2BCP62807 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST2H2BEQ16778 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.34□□□□□ -0.91
PDZD3-213ENST00000533688 Q8NDZ9 215 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST1H2BHQ93079 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST1H2BNQ99877 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 HIST1H2BMQ99879 126 aa9.34□□□□□ -0.91
PDZD3-213ENST00000533688 LINC01549A6NIU2 74 aa9.33□□□□□ -0.92
PDZD3-213ENST00000533688 ZNF625Q96I27 306 aaPredicted RBP9.33□□□□□ -0.92
PDZD3-213ENST00000533688 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
PDZD3-213ENST00000533688 LINC01546A6NGU7 62 aa9.31□□□□□ -0.92
PDZD3-213ENST00000533688 IGLC3P0DOY3 106 aa9.31□□□□□ -0.92
PDZD3-213ENST00000533688 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
PDZD3-213ENST00000533688 FP248Q71RG6 208 aaPredicted RBP9.31□□□□□ -0.92
PDZD3-213ENST00000533688 LINC00337Q8N6G1 96 aa9.31□□□□□ -0.92
PDZD3-213ENST00000533688 NDUFA6P56556 154 aa9.3□□□□□ -0.92
PDZD3-213ENST00000533688 FA2HQ7L5A8 372 aa9.3□□□□□ -0.92
PDZD3-213ENST00000533688 SPRR4Q96PI1 79 aa9.3□□□□□ -0.92
PDZD3-213ENST00000533688 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
PDZD3-213ENST00000533688 COX17Q14061 63 aa9.29□□□□□ -0.92
PDZD3-213ENST00000533688 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
PDZD3-213ENST00000533688 KRTAP13-3Q3SY46 172 aa9.28□□□□□ -0.92
PDZD3-213ENST00000533688 DAND5Q8N907 189 aa9.28□□□□□ -0.92
PDZD3-213ENST00000533688 Q8NBF4 154 aa9.28□□□□□ -0.92
PDZD3-213ENST00000533688 FSIP2Q5CZC0 6907 aa9.27□□□□□ -0.92
PDZD3-213ENST00000533688 LINC01547P58512 204 aaPredicted RBP9.27□□□□□ -0.93
PDZD3-213ENST00000533688 COA6Q5JTJ3 125 aaKnown RBP9.27□□□□□ -0.93
PDZD3-213ENST00000533688 C18orf32Q8TCD1 76 aa9.27□□□□□ -0.93
PDZD3-213ENST00000533688 ZNF706Q9Y5V0 76 aaPredicted RBP9.27□□□□□ -0.93
PDZD3-213ENST00000533688 S100A6P06703 90 aa9.26□□□□□ -0.93
PDZD3-213ENST00000533688 ASB16-AS1Q495Z4 193 aa9.26□□□□□ -0.93
PDZD3-213ENST00000533688 C5orf52A6NGY3 159 aa9.25□□□□□ -0.93
PDZD3-213ENST00000533688 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
PDZD3-213ENST00000533688 KRTAP4-1Q9BYQ7 146 aa9.24□□□□□ -0.93
PDZD3-213ENST00000533688 A0A096LNJ9 63 aa9.23□□□□□ -0.93
PDZD3-213ENST00000533688 A0A0U1RRA0 63 aa9.23□□□□□ -0.93
PDZD3-213ENST00000533688 LINC00158P58513 81 aa9.23□□□□□ -0.93
PDZD3-213ENST00000533688 LINC00310P59036 64 aa9.23□□□□□ -0.93
PDZD3-213ENST00000533688 TMEM170BQ5T4T1 132 aa9.23□□□□□ -0.93
PDZD3-213ENST00000533688 BAGE3Q86Y29 109 aa9.23□□□□□ -0.93
PDZD3-213ENST00000533688 C11orf86A6NJI1 115 aa9.22□□□□□ -0.93
PDZD3-213ENST00000533688 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
PDZD3-213ENST00000533688 URB1-AS1Q96HZ7 61 aa9.22□□□□□ -0.93
PDZD3-213ENST00000533688 SERF1AO75920 110 aa9.21□□□□□ -0.94
PDZD3-213ENST00000533688 NCR3O14931 201 aa9.2□□□□□ -0.94
PDZD3-213ENST00000533688 SEC61BP60468 96 aaKnown RBP9.2□□□□□ -0.94
PDZD3-213ENST00000533688 PMCHL1Q16048 86 aa9.2□□□□□ -0.94
PDZD3-213ENST00000533688 HIST3H2BBQ8N257 126 aa9.2□□□□□ -0.94
PDZD3-213ENST00000533688 PRYO14603 147 aa9.19□□□□□ -0.94
PDZD3-213ENST00000533688 SPINK1P00995 79 aa9.19□□□□□ -0.94
PDZD3-213ENST00000533688 LINC00614P0C842 121 aa9.19□□□□□ -0.94
PDZD3-213ENST00000533688 LOC105371267A0A1B0GV96 52 aa9.18□□□□□ -0.94
PDZD3-213ENST00000533688 HBDP02042 147 aa9.18□□□□□ -0.94
PDZD3-213ENST00000533688 LCE2DQ5TA82 110 aaPredicted RBP9.18□□□□□ -0.94
PDZD3-213ENST00000533688 SMCR5Q8TEV8 140 aa9.18□□□□□ -0.94
PDZD3-213ENST00000533688 CHCHD1Q96BP2 118 aaKnown RBP9.18□□□□□ -0.94
PDZD3-213ENST00000533688 NDUFA12Q9UI09 145 aa9.18□□□□□ -0.94
PDZD3-213ENST00000533688 ETDCA0A1B0GVM5 59 aa9.17□□□□□ -0.94
PDZD3-213ENST00000533688 BOD1L2Q8IYS8 172 aa9.17□□□□□ -0.94
PDZD3-213ENST00000533688 MOBPQ13875 183 aa9.16□□□□□ -0.94
PDZD3-213ENST00000533688 IGLV9-49A0A0B4J1Y8 123 aa9.15□□□□□ -0.94
PDZD3-213ENST00000533688 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
PDZD3-213ENST00000533688 SPRR1AP35321 89 aa9.15□□□□□ -0.94
PDZD3-213ENST00000533688 GAGE2AQ6NT46 116 aa9.15□□□□□ -0.94
PDZD3-213ENST00000533688 HSBP1O75506 76 aa9.14□□□□□ -0.95
PDZD3-213ENST00000533688 S100A2P29034 98 aa9.14□□□□□ -0.95
PDZD3-213ENST00000533688 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
PDZD3-213ENST00000533688 MEIG1Q5JSS6 88 aa9.14□□□□□ -0.95
PDZD3-213ENST00000533688 HIST1H2BLQ99880 126 aa9.14□□□□□ -0.95
PDZD3-213ENST00000533688 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
PDZD3-213ENST00000533688 CHTOPQ9Y3Y2 248 aaKnown RBP9.14□□□□□ -0.95
PDZD3-213ENST00000533688 Q8N377 158 aa9.13□□□□□ -0.95
PDZD3-213ENST00000533688 FAM19A2Q8N3H0 131 aa9.13□□□□□ -0.95
PDZD3-213ENST00000533688 CRCT1Q9UGL9 99 aa9.13□□□□□ -0.95
PDZD3-213ENST00000533688 TRBV10-3A0A0K0K1G6 114 aa9.12□□□□□ -0.95
PDZD3-213ENST00000533688 KRTAP4-16G5E9R7 235 aaPredicted RBP9.12□□□□□ -0.95
PDZD3-213ENST00000533688 MIR7-3HGQ8N6C7 128 aa9.12□□□□□ -0.95
PDZD3-213ENST00000533688 TMEM223A0PJW6 202 aa9.11□□□□□ -0.95
PDZD3-213ENST00000533688 FABP4P15090 132 aa9.11□□□□□ -0.95
PDZD3-213ENST00000533688 ERC2-IT1O76042 136 aa9.09□□□□□ -0.95
PDZD3-213ENST00000533688 RPS29P62273 56 aaKnown RBP9.09□□□□□ -0.95
PDZD3-213ENST00000533688 B5MCH6 92 aa9.08□□□□□ -0.96
PDZD3-213ENST00000533688 SLC25A20O43772 301 aa9.08□□□□□ -0.96
PDZD3-213ENST00000533688 S100A12P80511 92 aa9.08□□□□□ -0.96
PDZD3-213ENST00000533688 XP32Q5T750 250 aa9.08□□□□□ -0.96
PDZD3-213ENST00000533688 LEPROTL1O95214 131 aa9.06□□□□□ -0.96
PDZD3-213ENST00000533688 SSBP3-AS1Q7Z2R9 100 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms