RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 ABCA13Q86UQ4 5058 aa12.98□□□□□ -0.33
VPS51-211ENST00000533487 TSPEAR-AS2P59090 65 aa12.98□□□□□ -0.33
VPS51-211ENST00000533487 MRPL55Q7Z7F7 128 aaKnown RBP12.98□□□□□ -0.33
VPS51-211ENST00000533487 NKAPP1Q8N9T2 125 aa12.98□□□□□ -0.33
VPS51-211ENST00000533487 HIST1H2BLQ99880 126 aa12.98□□□□□ -0.33
VPS51-211ENST00000533487 PSORS1C2Q9UIG4 136 aa12.98□□□□□ -0.33
VPS51-211ENST00000533487 SNRPEP62304 92 aaKnown RBP12.96□□□□□ -0.33
VPS51-211ENST00000533487 SMIM13P0DJ93 91 aa12.95□□□□□ -0.34
VPS51-211ENST00000533487 SPINK6Q6UWN8 80 aa12.95□□□□□ -0.34
VPS51-211ENST00000533487 PCLOQ9Y6V0 5065 aa12.95□□□□□ -0.34
VPS51-211ENST00000533487 OXTP01178 125 aa12.94□□□□□ -0.34
VPS51-211ENST00000533487 C5orf52A6NGY3 159 aa12.93□□□□□ -0.34
VPS51-211ENST00000533487 C1orf137Q5JT78 98 aa12.93□□□□□ -0.34
VPS51-211ENST00000533487 VPREB1P12018 145 aa12.92□□□□□ -0.34
VPS51-211ENST00000533487 HNRNPA3P51991 378 aaKnown RBP12.92□□□□□ -0.34
VPS51-211ENST00000533487 MIR7-3HGQ8N6C7 128 aa12.92□□□□□ -0.34
VPS51-211ENST00000533487 FLG2Q5D862 2391 aaPredicted RBP12.92□□□□□ -0.34
VPS51-211ENST00000533487 LOC107984156A0A0G2JMH3 177 aa12.91□□□□□ -0.34
VPS51-211ENST00000533487 KRTAP29-1A8MX34 341 aaPredicted RBP12.91□□□□□ -0.34
VPS51-211ENST00000533487 SRSF9Q13242 221 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS51-211ENST00000533487 ARL17AQ8IVW1 177 aa12.91□□□□□ -0.34
VPS51-211ENST00000533487 LINC00167Q96N53 147 aa12.91□□□□□ -0.34
VPS51-211ENST00000533487 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
VPS51-211ENST00000533487 IGLV7-43P04211 117 aa12.89□□□□□ -0.35
VPS51-211ENST00000533487 IGKV2D-26A0A0A0MRZ7 120 aa12.88□□□□□ -0.35
VPS51-211ENST00000533487 A0A0J9YXY3 114 aa12.88□□□□□ -0.35
VPS51-211ENST00000533487 TIMM17BO60830 172 aa12.88□□□□□ -0.35
VPS51-211ENST00000533487 KRTAP11-1Q8IUC1 163 aa12.87□□□□□ -0.35
VPS51-211ENST00000533487 REG3GQ6UW15 175 aa12.86□□□□□ -0.35
VPS51-211ENST00000533487 MIEN1Q9BRT3 115 aa12.86□□□□□ -0.35
VPS51-211ENST00000533487 ZNF815PA8K554 130 aa12.85□□□□□ -0.35
VPS51-211ENST00000533487 M0R378 163 aa12.85□□□□□ -0.35
VPS51-211ENST00000533487 BOD1L2Q8IYS8 172 aa12.85□□□□□ -0.35
VPS51-211ENST00000533487 DIRC1Q969H9 104 aa12.84□□□□□ -0.35
VPS51-211ENST00000533487 IGLV1-50A0A075B6I6 118 aa12.83□□□□□ -0.36
VPS51-211ENST00000533487 HSBP1L1C9JCN9 74 aa12.83□□□□□ -0.36
VPS51-211ENST00000533487 BCE1O60756 84 aa12.82□□□□□ -0.36
VPS51-211ENST00000533487 NDUFC2O95298 119 aa12.82□□□□□ -0.36
VPS51-211ENST00000533487 TRBV10-2A0A0K0K1G8 114 aa12.81□□□□□ -0.36
VPS51-211ENST00000533487 GAGE10A6NGK3 116 aa12.81□□□□□ -0.36
VPS51-211ENST00000533487 RPL37AP8A6NKH3 93 aa12.81□□□□□ -0.36
VPS51-211ENST00000533487 J3QL48 77 aa12.81□□□□□ -0.36
VPS51-211ENST00000533487 ATOH7Q8N100 152 aa12.81□□□□□ -0.36
VPS51-211ENST00000533487 PKHD1L1Q86WI1 4243 aa12.8□□□□□ -0.36
VPS51-211ENST00000533487 ZNF861PO60384 105 aa12.8□□□□□ -0.36
VPS51-211ENST00000533487 ANKRD39Q53RE8 183 aa12.8□□□□□ -0.36
VPS51-211ENST00000533487 RPL28P46779 137 aaKnown RBP12.79□□□□□ -0.36
VPS51-211ENST00000533487 Q8NDZ9 215 aa12.79□□□□□ -0.36
VPS51-211ENST00000533487 COPS9Q8WXC6 57 aa12.79□□□□□ -0.36
VPS51-211ENST00000533487 MYCBP2O75592 4640 aa12.78□□□□□ -0.36
VPS51-211ENST00000533487 S100A12P80511 92 aa12.78□□□□□ -0.36
VPS51-211ENST00000533487 DAND5Q8N907 189 aa12.78□□□□□ -0.36
VPS51-211ENST00000533487 IGKV2-28A0A075B6P5 120 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 TMEM238C9JI98 176 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 H0Y9J4 135 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 SCGB1D1O95968 90 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 IGKV2D-28P01615 120 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 ADAMTSL4-AS1Q5T5F5 129 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 SCGB1D4Q6XE38 83 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 Q6ZVH6 145 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 LITAFQ99732 161 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 PPDPFQ9H3Y8 114 aa12.77□□□□□ -0.37
VPS51-211ENST00000533487 SPANXB1Q9NS25 103 aaPredicted RBP12.77□□□□□ -0.37
VPS51-211ENST00000533487 DMBT1Q9UGM3 2413 aaPredicted RBP12.76□□□□□ -0.37
VPS51-211ENST00000533487 LINC01600Q96MT4 127 aa12.76□□□□□ -0.37
VPS51-211ENST00000533487 PRYO14603 147 aa12.74□□□□□ -0.37
VPS51-211ENST00000533487 TMEM126AQ9H061 195 aa12.74□□□□□ -0.37
VPS51-211ENST00000533487 CBY1Q9Y3M2 126 aa12.74□□□□□ -0.37
VPS51-211ENST00000533487 LINC00308Q8TCZ7 52 aa12.73□□□□□ -0.37
VPS51-211ENST00000533487 SPANXDQ9BXN6 97 aa12.73□□□□□ -0.37
VPS51-211ENST00000533487 TTTY13Q9BZ97 58 aa12.73□□□□□ -0.37
VPS51-211ENST00000533487 SPANXCQ9NY87 97 aa12.73□□□□□ -0.37
VPS51-211ENST00000533487 NCR3O14931 201 aa12.72□□□□□ -0.37
VPS51-211ENST00000533487 KCNQ1DNQ9H478 68 aa12.72□□□□□ -0.37
VPS51-211ENST00000533487 IFITM1P13164 125 aa12.71□□□□□ -0.37
VPS51-211ENST00000533487 UBE2AP49459 152 aa12.71□□□□□ -0.37
VPS51-211ENST00000533487 PCP2Q8IVA1 136 aa12.71□□□□□ -0.37
VPS51-211ENST00000533487 SOSTDC1Q6X4U4 206 aa12.7□□□□□ -0.38
VPS51-211ENST00000533487 KRTAP13-1Q8IUC0 172 aa12.7□□□□□ -0.38
VPS51-211ENST00000533487 LINC00518Q8N0U6 118 aa12.69□□□□□ -0.38
VPS51-211ENST00000533487 TRBV10-3A0A0K0K1G6 114 aa12.68□□□□□ -0.38
VPS51-211ENST00000533487 DDTP30046 118 aa12.68□□□□□ -0.38
VPS51-211ENST00000533487 LINC00337Q8N6G1 96 aa12.68□□□□□ -0.38
VPS51-211ENST00000533487 SPRR1AP35321 89 aa12.67□□□□□ -0.38
VPS51-211ENST00000533487 S100A7L2Q5SY68 101 aa12.67□□□□□ -0.38
VPS51-211ENST00000533487 FAM19A1Q7Z5A9 133 aa12.67□□□□□ -0.38
VPS51-211ENST00000533487 IGLV6-57P01721 117 aa12.66□□□□□ -0.38
VPS51-211ENST00000533487 NPC2P61916 151 aa12.66□□□□□ -0.38
VPS51-211ENST00000533487 JOSD1Q15040 202 aaPredicted RBP12.66□□□□□ -0.38
VPS51-211ENST00000533487 LRP1Q07954 4544 aaKnown RBP12.65□□□□□ -0.38
VPS51-211ENST00000533487 FAT3Q8TDW7 4589 aa12.64□□□□□ -0.39
VPS51-211ENST00000533487 EIF4EBP3O60516 100 aaPredicted RBP12.64□□□□□ -0.39
VPS51-211ENST00000533487 MT1HL1P0DM35 61 aa12.64□□□□□ -0.39
VPS51-211ENST00000533487 DLEU1O43261 78 aa12.62□□□□□ -0.39
VPS51-211ENST00000533487 ETDCA0A1B0GVM5 59 aa12.61□□□□□ -0.39
VPS51-211ENST00000533487 KRTAP4-16G5E9R7 235 aaPredicted RBP12.61□□□□□ -0.39
VPS51-211ENST00000533487 COX8AP10176 69 aa12.61□□□□□ -0.39
VPS51-211ENST00000533487 KRTAP10-8P60410 259 aa12.61□□□□□ -0.39
VPS51-211ENST00000533487 KRTAP1-4P0C5Y4 121 aa12.6□□□□□ -0.39
VPS51-211ENST00000533487 RPL13AP40429 203 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms