RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 PSORS1C2Q9UIG4 136 aa7.56□□□□□ -1.2
SF3B2-213ENST00000533421 J3QQQ9 107 aa7.55□□□□□ -1.2
SF3B2-213ENST00000533421 M0QXV9 152 aa7.55□□□□□ -1.2
SF3B2-213ENST00000533421 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
SF3B2-213ENST00000533421 LINC00158P58513 81 aa7.55□□□□□ -1.2
SF3B2-213ENST00000533421 HERVK_113P61574 105 aa7.55□□□□□ -1.2
SF3B2-213ENST00000533421 LINC01600Q96MT4 127 aa7.55□□□□□ -1.2
SF3B2-213ENST00000533421 TTTY13Q9BZ97 58 aa7.55□□□□□ -1.2
SF3B2-213ENST00000533421 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
SF3B2-213ENST00000533421 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
SF3B2-213ENST00000533421 C5orf52A6NGY3 159 aa7.54□□□□□ -1.2
SF3B2-213ENST00000533421 LGALS3P17931 250 aaKnown RBP7.54□□□□□ -1.2
SF3B2-213ENST00000533421 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
SF3B2-213ENST00000533421 PLEKHB2Q96CS7 222 aa7.54□□□□□ -1.2
SF3B2-213ENST00000533421 SND1-IT1Q9HBX3 110 aa7.54□□□□□ -1.2
SF3B2-213ENST00000533421 FAT3Q8TDW7 4589 aa7.54□□□□□ -1.2
SF3B2-213ENST00000533421 SRSF9Q13242 221 aaKnown RBP eCLIP7.53□□□□□ -1.2
SF3B2-213ENST00000533421 LBHQ53QV2 105 aaPredicted RBP7.53□□□□□ -1.2
SF3B2-213ENST00000533421 DAND5Q8N907 189 aa7.53□□□□□ -1.2
SF3B2-213ENST00000533421 Q8NDZ9 215 aa7.53□□□□□ -1.2
SF3B2-213ENST00000533421 DIRC1Q969H9 104 aa7.53□□□□□ -1.2
SF3B2-213ENST00000533421 PLA2G2DQ9UNK4 145 aa7.53□□□□□ -1.2
SF3B2-213ENST00000533421 MYMXA0A1B0GTQ4 84 aa7.52□□□□□ -1.21
SF3B2-213ENST00000533421 C20orf202A1L168 122 aa7.52□□□□□ -1.21
SF3B2-213ENST00000533421 GAGE10A6NGK3 116 aa7.52□□□□□ -1.21
SF3B2-213ENST00000533421 E9PLD3 99 aa7.52□□□□□ -1.21
SF3B2-213ENST00000533421 ANKRD39Q53RE8 183 aa7.52□□□□□ -1.21
SF3B2-213ENST00000533421 SFTA2Q6UW10 78 aa7.52□□□□□ -1.21
SF3B2-213ENST00000533421 IGLV7-43P04211 117 aa7.51□□□□□ -1.21
SF3B2-213ENST00000533421 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
SF3B2-213ENST00000533421 C22orf24Q9Y442 160 aa7.51□□□□□ -1.21
SF3B2-213ENST00000533421 MIR7-3HGQ8N6C7 128 aa7.5□□□□□ -1.21
SF3B2-213ENST00000533421 TP73-AS1Q9UF72 201 aa7.5□□□□□ -1.21
SF3B2-213ENST00000533421 NMUP48645 174 aa7.49□□□□□ -1.21
SF3B2-213ENST00000533421 NPC2P61916 151 aa7.49□□□□□ -1.21
SF3B2-213ENST00000533421 HERV-K104P63124 156 aa7.49□□□□□ -1.21
SF3B2-213ENST00000533421 A0A0J9YXY3 114 aa7.48□□□□□ -1.21
SF3B2-213ENST00000533421 RPL37AP8A6NKH3 93 aa7.48□□□□□ -1.21
SF3B2-213ENST00000533421 SCGB1D1O95968 90 aa7.48□□□□□ -1.21
SF3B2-213ENST00000533421 COX17Q14061 63 aa7.48□□□□□ -1.21
SF3B2-213ENST00000533421 ZNF815PA8K554 130 aa7.47□□□□□ -1.21
SF3B2-213ENST00000533421 VPREB1P12018 145 aa7.47□□□□□ -1.21
SF3B2-213ENST00000533421 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
SF3B2-213ENST00000533421 LINC00167Q96N53 147 aa7.47□□□□□ -1.21
SF3B2-213ENST00000533421 H0Y9J4 135 aa7.46□□□□□ -1.22
SF3B2-213ENST00000533421 EIF4EBP3O60516 100 aaPredicted RBP7.46□□□□□ -1.22
SF3B2-213ENST00000533421 MRPL55Q7Z7F7 128 aaKnown RBP7.46□□□□□ -1.22
SF3B2-213ENST00000533421 PCP2Q8IVA1 136 aa7.46□□□□□ -1.22
SF3B2-213ENST00000533421 NKAPP1Q8N9T2 125 aa7.46□□□□□ -1.22
SF3B2-213ENST00000533421 NCR3O14931 201 aa7.45□□□□□ -1.22
SF3B2-213ENST00000533421 BOD1L2Q8IYS8 172 aa7.45□□□□□ -1.22
SF3B2-213ENST00000533421 IGKV2-28A0A075B6P5 120 aa7.44□□□□□ -1.22
SF3B2-213ENST00000533421 IGKV2D-28P01615 120 aa7.44□□□□□ -1.22
SF3B2-213ENST00000533421 SOSTDC1Q6X4U4 206 aa7.44□□□□□ -1.22
SF3B2-213ENST00000533421 IGLV5-37A0A075B6J1 123 aa7.43□□□□□ -1.22
SF3B2-213ENST00000533421 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
SF3B2-213ENST00000533421 LITAFQ99732 161 aa7.43□□□□□ -1.22
SF3B2-213ENST00000533421 IGLV1-50A0A075B6I6 118 aa7.42□□□□□ -1.22
SF3B2-213ENST00000533421 ZNF861PO60384 105 aa7.42□□□□□ -1.22
SF3B2-213ENST00000533421 RPL28P46779 137 aaKnown RBP7.42□□□□□ -1.22
SF3B2-213ENST00000533421 RPL24P83731 157 aaKnown RBP7.42□□□□□ -1.22
SF3B2-213ENST00000533421 LINC00587B1AMM8 73 aa7.41□□□□□ -1.22
SF3B2-213ENST00000533421 TMEM238C9JI98 176 aa7.41□□□□□ -1.22
SF3B2-213ENST00000533421 RPL13AP40429 203 aaKnown RBP7.41□□□□□ -1.22
SF3B2-213ENST00000533421 HSBP1L1C9JCN9 74 aa7.4□□□□□ -1.22
SF3B2-213ENST00000533421 BCE1O60756 84 aa7.4□□□□□ -1.22
SF3B2-213ENST00000533421 SCGB1D4Q6XE38 83 aa7.4□□□□□ -1.22
SF3B2-213ENST00000533421 M0R378 163 aa7.38□□□□□ -1.23
SF3B2-213ENST00000533421 LINC00308Q8TCZ7 52 aa7.38□□□□□ -1.23
SF3B2-213ENST00000533421 MIEN1Q9BRT3 115 aa7.38□□□□□ -1.23
SF3B2-213ENST00000533421 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
SF3B2-213ENST00000533421 UBE2AP49459 152 aa7.37□□□□□ -1.23
SF3B2-213ENST00000533421 AKR1D1P51857 326 aa7.37□□□□□ -1.23
SF3B2-213ENST00000533421 TRBV10-3A0A0K0K1G6 114 aa7.36□□□□□ -1.23
SF3B2-213ENST00000533421 TIMM17BO60830 172 aa7.36□□□□□ -1.23
SF3B2-213ENST00000533421 JOSD1Q15040 202 aaPredicted RBP7.36□□□□□ -1.23
SF3B2-213ENST00000533421 PYY3Q5JQD4 70 aa7.36□□□□□ -1.23
SF3B2-213ENST00000533421 PRR26Q8N8Z3 221 aa7.36□□□□□ -1.23
SF3B2-213ENST00000533421 PRLHP81277 87 aa7.35□□□□□ -1.23
SF3B2-213ENST00000533421 SPATA45Q537H7 98 aa7.35□□□□□ -1.23
SF3B2-213ENST00000533421 C14orf144Q96I85 54 aa7.35□□□□□ -1.23
SF3B2-213ENST00000533421 TMEM126AQ9H061 195 aa7.35□□□□□ -1.23
SF3B2-213ENST00000533421 TNXBP22105 4242 aa7.35□□□□□ -1.23
SF3B2-213ENST00000533421 LOC107984156A0A0G2JMH3 177 aa7.34□□□□□ -1.23
SF3B2-213ENST00000533421 ARL17AQ8IVW1 177 aa7.34□□□□□ -1.23
SF3B2-213ENST00000533421 VAMP8Q9BV40 100 aa7.34□□□□□ -1.23
SF3B2-213ENST00000533421 SPANXDQ9BXN6 97 aa7.34□□□□□ -1.23
SF3B2-213ENST00000533421 SPANXCQ9NY87 97 aa7.34□□□□□ -1.23
SF3B2-213ENST00000533421 KRTAP1-4P0C5Y4 121 aa7.33□□□□□ -1.24
SF3B2-213ENST00000533421 FAM19A1Q7Z5A9 133 aa7.33□□□□□ -1.24
SF3B2-213ENST00000533421 MUSTN1Q8IVN3 82 aa7.33□□□□□ -1.24
SF3B2-213ENST00000533421 DDTP30046 118 aa7.32□□□□□ -1.24
SF3B2-213ENST00000533421 S100A12P80511 92 aa7.32□□□□□ -1.24
SF3B2-213ENST00000533421 SPANXB1Q9NS25 103 aaPredicted RBP7.32□□□□□ -1.24
SF3B2-213ENST00000533421 RNF213Q63HN8 5207 aa7.31□□□□□ -1.24
SF3B2-213ENST00000533421 NDUFC2O95298 119 aa7.31□□□□□ -1.24
SF3B2-213ENST00000533421 COX8AP10176 69 aa7.31□□□□□ -1.24
SF3B2-213ENST00000533421 CRYGAP11844 174 aa7.31□□□□□ -1.24
SF3B2-213ENST00000533421 S100A7L2Q5SY68 101 aa7.3□□□□□ -1.24
SF3B2-213ENST00000533421 KRTAP13-1Q8IUC0 172 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms