RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FABP2P12104 132 aa7.2□□□□□ -1.26
TRAPPC4-211ENST00000533012 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
TRAPPC4-211ENST00000533012 Q6ZSA8 131 aa7.2□□□□□ -1.26
TRAPPC4-211ENST00000533012 NHP2Q9NX24 153 aaKnown RBP7.2□□□□□ -1.26
TRAPPC4-211ENST00000533012 LINC00474Q9P2X8 69 aa7.2□□□□□ -1.26
TRAPPC4-211ENST00000533012 TLX1NBP0CAT3 122 aa7.19□□□□□ -1.26
TRAPPC4-211ENST00000533012 GAGE2BQ13066 116 aa7.19□□□□□ -1.26
TRAPPC4-211ENST00000533012 CIRBPQ14011 172 aaKnown RBP7.19□□□□□ -1.26
TRAPPC4-211ENST00000533012 IGKV2-24A0A0C4DH68 120 aa7.18□□□□□ -1.26
TRAPPC4-211ENST00000533012 TIMM17BO60830 172 aa7.18□□□□□ -1.26
TRAPPC4-211ENST00000533012 FXYD2P54710 66 aa7.18□□□□□ -1.26
TRAPPC4-211ENST00000533012 XGP55808 180 aa7.18□□□□□ -1.26
TRAPPC4-211ENST00000533012 RPL18AQ02543 176 aaKnown RBP7.18□□□□□ -1.26
TRAPPC4-211ENST00000533012 C9orf116Q5BN46 136 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC4-211ENST00000533012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC4-211ENST00000533012 A0A096LNI7 61 aa7.17□□□□□ -1.26
TRAPPC4-211ENST00000533012 A0A1B0GWB2 263 aa7.17□□□□□ -1.26
TRAPPC4-211ENST00000533012 GAGE10A6NGK3 116 aa7.17□□□□□ -1.26
TRAPPC4-211ENST00000533012 NDUFC2-KCTD14E9PQ53 114 aa7.17□□□□□ -1.26
TRAPPC4-211ENST00000533012 CHTF8P0CG12 524 aa7.17□□□□□ -1.26
TRAPPC4-211ENST00000533012 HERV-K104P63124 156 aa7.17□□□□□ -1.26
TRAPPC4-211ENST00000533012 NDUFA12Q9UI09 145 aa7.17□□□□□ -1.26
TRAPPC4-211ENST00000533012 KIAA1109Q2LD37 5005 aa7.17□□□□□ -1.26
TRAPPC4-211ENST00000533012 A0A0J9YXY3 114 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 A0A1W2PPM0 123 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 H3BUT2 72 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 PANO1I0J062 215 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 IFITM1P13164 125 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 GAGE2EQ4V326 116 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 Q6ZRP5 223 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 SCXQ7RTU7 201 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 CIRBP-AS1Q8TBR5 109 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 SPACA4Q8TDM5 124 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 RAB37Q96AX2 223 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 GAGE2DQ9UEU5 116 aa7.16□□□□□ -1.26
TRAPPC4-211ENST00000533012 RYR1P21817 5038 aa7.15□□□□□ -1.26
TRAPPC4-211ENST00000533012 TSPEAR-AS2P59090 65 aa7.15□□□□□ -1.26
TRAPPC4-211ENST00000533012 HAMPP81172 84 aa7.15□□□□□ -1.26
TRAPPC4-211ENST00000533012 ZNF625Q96I27 306 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC4-211ENST00000533012 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.26
TRAPPC4-211ENST00000533012 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
TRAPPC4-211ENST00000533012 SPANXCQ9NY87 97 aa7.15□□□□□ -1.26
TRAPPC4-211ENST00000533012 A0A087WYN8 130 aa7.14□□□□□ -1.27
TRAPPC4-211ENST00000533012 K7EP34 96 aa7.14□□□□□ -1.27
TRAPPC4-211ENST00000533012 COX17Q14061 63 aa7.14□□□□□ -1.27
TRAPPC4-211ENST00000533012 SPCS1Q9Y6A9 102 aa7.14□□□□□ -1.27
TRAPPC4-211ENST00000533012 HSPG2P98160 4391 aa7.13□□□□□ -1.27
TRAPPC4-211ENST00000533012 PFN2P35080 140 aa7.13□□□□□ -1.27
TRAPPC4-211ENST00000533012 PPDPFQ9H3Y8 114 aa7.13□□□□□ -1.27
TRAPPC4-211ENST00000533012 ERG28Q9UKR5 140 aa7.13□□□□□ -1.27
TRAPPC4-211ENST00000533012 A0A0B4J2C4 111 aa7.12□□□□□ -1.27
TRAPPC4-211ENST00000533012 SMR3BP02814 79 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC4-211ENST00000533012 PLAC8Q9NZF1 115 aa7.12□□□□□ -1.27
TRAPPC4-211ENST00000533012 LINC00158P58513 81 aa7.11□□□□□ -1.27
TRAPPC4-211ENST00000533012 MEIG1Q5JSS6 88 aa7.11□□□□□ -1.27
TRAPPC4-211ENST00000533012 PRO1854Q9UHT4 67 aa7.11□□□□□ -1.27
TRAPPC4-211ENST00000533012 A0A1W2PNN7 141 aa7.1□□□□□ -1.27
TRAPPC4-211ENST00000533012 C9orf129Q5T035 196 aaKnown RBP7.1□□□□□ -1.27
TRAPPC4-211ENST00000533012 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
TRAPPC4-211ENST00000533012 TRBV20-1A0A075B6N2 111 aa7.09□□□□□ -1.27
TRAPPC4-211ENST00000533012 A0A0U1RRA0 63 aa7.09□□□□□ -1.27
TRAPPC4-211ENST00000533012 FAM229AH3BQW9 127 aa7.09□□□□□ -1.27
TRAPPC4-211ENST00000533012 K7ERJ3 54 aa7.09□□□□□ -1.27
TRAPPC4-211ENST00000533012 EPM2AB3EWF7 344 aa7.08□□□□□ -1.28
TRAPPC4-211ENST00000533012 MUSTN1Q8IVN3 82 aa7.08□□□□□ -1.28
TRAPPC4-211ENST00000533012 Q8N1X5 172 aa7.08□□□□□ -1.28
TRAPPC4-211ENST00000533012 HERC2O95714 4834 aa7.08□□□□□ -1.28
TRAPPC4-211ENST00000533012 FAT1Q14517 4588 aa7.08□□□□□ -1.28
TRAPPC4-211ENST00000533012 FAM168BA1KXE4 195 aa7.07□□□□□ -1.28
TRAPPC4-211ENST00000533012 A4D1N5 150 aa7.07□□□□□ -1.28
TRAPPC4-211ENST00000533012 F8W1H4 67 aa7.07□□□□□ -1.28
TRAPPC4-211ENST00000533012 COX6CP09669 75 aa7.07□□□□□ -1.28
TRAPPC4-211ENST00000533012 CFC1BP0CG36 223 aa7.07□□□□□ -1.28
TRAPPC4-211ENST00000533012 CFC1P0CG37 223 aa7.07□□□□□ -1.28
TRAPPC4-211ENST00000533012 LINC00528Q8N1L1 170 aa7.07□□□□□ -1.28
TRAPPC4-211ENST00000533012 C7orf33Q8WU49 177 aa7.07□□□□□ -1.28
TRAPPC4-211ENST00000533012 SND1-IT1Q9HBX3 110 aa7.07□□□□□ -1.28
TRAPPC4-211ENST00000533012 Q1RN00 199 aa7.06□□□□□ -1.28
TRAPPC4-211ENST00000533012 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC4-211ENST00000533012 MIR7-3HGQ8N6C7 128 aa7.06□□□□□ -1.28
TRAPPC4-211ENST00000533012 LITAFQ99732 161 aa7.06□□□□□ -1.28
TRAPPC4-211ENST00000533012 LOC107984156A0A0G2JMH3 177 aa7.05□□□□□ -1.28
TRAPPC4-211ENST00000533012 K7ERU9 68 aa7.05□□□□□ -1.28
TRAPPC4-211ENST00000533012 TSPAN13O95857 204 aa7.05□□□□□ -1.28
TRAPPC4-211ENST00000533012 PSMB2P49721 201 aa7.05□□□□□ -1.28
TRAPPC4-211ENST00000533012 ARL17AQ8IVW1 177 aa7.05□□□□□ -1.28
TRAPPC4-211ENST00000533012 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
TRAPPC4-211ENST00000533012 PLA2G1BP04054 148 aaKnown RBP7.04□□□□□ -1.28
TRAPPC4-211ENST00000533012 SCGB1C2P0DMR2 95 aa7.04□□□□□ -1.28
TRAPPC4-211ENST00000533012 SERTAD4-AS1Q5TG53 156 aa7.04□□□□□ -1.28
TRAPPC4-211ENST00000533012 Q5VSD8 79 aa7.04□□□□□ -1.28
TRAPPC4-211ENST00000533012 PHF5AQ7RTV0 110 aaKnown RBP7.04□□□□□ -1.28
TRAPPC4-211ENST00000533012 KRTAP7-1Q8IUC3 87 aa7.04□□□□□ -1.28
TRAPPC4-211ENST00000533012 NAA38Q9BRA0 125 aaKnown RBP7.04□□□□□ -1.28
TRAPPC4-211ENST00000533012 C22orf24Q9Y442 160 aa7.04□□□□□ -1.28
TRAPPC4-211ENST00000533012 J3QR89 54 aa7.03□□□□□ -1.28
TRAPPC4-211ENST00000533012 M0QXV9 152 aa7.03□□□□□ -1.28
TRAPPC4-211ENST00000533012 RPL37AP61513 92 aaKnown RBP7.02□□□□□ -1.29
TRAPPC4-211ENST00000533012 DAND5Q8N907 189 aa7.02□□□□□ -1.29
TRAPPC4-211ENST00000533012 NKAPP1Q8N9T2 125 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms