RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
CPSF1-210ENST00000532935 E9PLD3 99 aa9.53□□□□□ -0.88
CPSF1-210ENST00000532935 SPINK8P0C7L1 97 aa9.53□□□□□ -0.88
CPSF1-210ENST00000532935 CXCL5P42830 114 aa9.53□□□□□ -0.88
CPSF1-210ENST00000532935 COX7B2Q8TF08 81 aa9.53□□□□□ -0.88
CPSF1-210ENST00000532935 C14orf144Q96I85 54 aa9.53□□□□□ -0.88
CPSF1-210ENST00000532935 FAM19A5Q7Z5A7 132 aaPredicted RBP9.52□□□□□ -0.89
CPSF1-210ENST00000532935 BOD1L2Q8IYS8 172 aa9.52□□□□□ -0.89
CPSF1-210ENST00000532935 LINC00587B1AMM8 73 aa9.51□□□□□ -0.89
CPSF1-210ENST00000532935 H3BRM9 83 aa9.51□□□□□ -0.89
CPSF1-210ENST00000532935 C9orf129Q5T035 196 aaKnown RBP9.51□□□□□ -0.89
CPSF1-210ENST00000532935 PSORS1C2Q9UIG4 136 aa9.5□□□□□ -0.89
CPSF1-210ENST00000532935 TNXBP22105 4242 aa9.49□□□□□ -0.89
CPSF1-210ENST00000532935 ZNF22P17026 224 aaPredicted RBP9.49□□□□□ -0.89
CPSF1-210ENST00000532935 NMUP48645 174 aa9.49□□□□□ -0.89
CPSF1-210ENST00000532935 TMEM170BQ5T4T1 132 aa9.49□□□□□ -0.89
CPSF1-210ENST00000532935 KRTAP7-1Q8IUC3 87 aa9.49□□□□□ -0.89
CPSF1-210ENST00000532935 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
CPSF1-210ENST00000532935 SPINK6Q6UWN8 80 aa9.48□□□□□ -0.89
CPSF1-210ENST00000532935 IGLV5-39A0A0G2JS06 123 aa9.47□□□□□ -0.89
CPSF1-210ENST00000532935 M0QXV9 152 aa9.47□□□□□ -0.89
CPSF1-210ENST00000532935 SRSF9Q13242 221 aaKnown RBP eCLIP9.47□□□□□ -0.89
CPSF1-210ENST00000532935 LBHQ53QV2 105 aaPredicted RBP9.47□□□□□ -0.89
CPSF1-210ENST00000532935 PLEKHB2Q96CS7 222 aa9.47□□□□□ -0.89
CPSF1-210ENST00000532935 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
CPSF1-210ENST00000532935 IGKV2D-26A0A0A0MRZ7 120 aa9.46□□□□□ -0.9
CPSF1-210ENST00000532935 LEPROTO15243 131 aa9.46□□□□□ -0.9
CPSF1-210ENST00000532935 C1orf137Q5JT78 98 aa9.46□□□□□ -0.9
CPSF1-210ENST00000532935 XAGE1AQ9HD64 81 aa9.46□□□□□ -0.9
CPSF1-210ENST00000532935 M0R143 59 aa9.45□□□□□ -0.9
CPSF1-210ENST00000532935 MT1HL1P0DM35 61 aa9.45□□□□□ -0.9
CPSF1-210ENST00000532935 KRTAP11-1Q8IUC1 163 aa9.45□□□□□ -0.9
CPSF1-210ENST00000532935 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
CPSF1-210ENST00000532935 CTAG1AP78358 180 aa9.44□□□□□ -0.9
CPSF1-210ENST00000532935 SERTAD4-AS1Q5TG53 156 aa9.44□□□□□ -0.9
CPSF1-210ENST00000532935 PCP2Q8IVA1 136 aa9.44□□□□□ -0.9
CPSF1-210ENST00000532935 UBE2BP63146 152 aa9.43□□□□□ -0.9
CPSF1-210ENST00000532935 J3QQQ9 107 aa9.42□□□□□ -0.9
CPSF1-210ENST00000532935 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
CPSF1-210ENST00000532935 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
CPSF1-210ENST00000532935 HMCN2Q8NDA2 5059 aa9.41□□□□□ -0.9
CPSF1-210ENST00000532935 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
CPSF1-210ENST00000532935 LGALS3P17931 250 aaKnown RBP9.41□□□□□ -0.9
CPSF1-210ENST00000532935 TAL2Q16559 108 aa9.41□□□□□ -0.9
CPSF1-210ENST00000532935 LINC01600Q96MT4 127 aa9.41□□□□□ -0.9
CPSF1-210ENST00000532935 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
CPSF1-210ENST00000532935 HSD52Q0P140 79 aa9.4□□□□□ -0.9
CPSF1-210ENST00000532935 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
CPSF1-210ENST00000532935 PFN2P35080 140 aa9.38□□□□□ -0.91
CPSF1-210ENST00000532935 SNHG12Q9BXW3 62 aa9.38□□□□□ -0.91
CPSF1-210ENST00000532935 TP73-AS1Q9UF72 201 aa9.38□□□□□ -0.91
CPSF1-210ENST00000532935 SFTA2Q6UW10 78 aa9.37□□□□□ -0.91
CPSF1-210ENST00000532935 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
CPSF1-210ENST00000532935 ERG28Q9UKR5 140 aa9.37□□□□□ -0.91
CPSF1-210ENST00000532935 PLA2G2DQ9UNK4 145 aa9.37□□□□□ -0.91
CPSF1-210ENST00000532935 SCGB1D4Q6XE38 83 aa9.36□□□□□ -0.91
CPSF1-210ENST00000532935 DIRC1Q969H9 104 aa9.36□□□□□ -0.91
CPSF1-210ENST00000532935 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
CPSF1-210ENST00000532935 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
CPSF1-210ENST00000532935 TSPEAR-AS2P59090 65 aa9.35□□□□□ -0.91
CPSF1-210ENST00000532935 COX17Q14061 63 aa9.35□□□□□ -0.91
CPSF1-210ENST00000532935 BVES-AS1Q5T3Y7 98 aa9.35□□□□□ -0.91
CPSF1-210ENST00000532935 SPANXB1Q9NS25 103 aaPredicted RBP9.35□□□□□ -0.91
CPSF1-210ENST00000532935 IGLV5-37A0A075B6J1 123 aa9.34□□□□□ -0.91
CPSF1-210ENST00000532935 COL5A1-AS1Q5SY13 56 aa9.34□□□□□ -0.91
CPSF1-210ENST00000532935 NDUFA12Q9UI09 145 aa9.34□□□□□ -0.91
CPSF1-210ENST00000532935 H0Y9J4 135 aa9.33□□□□□ -0.92
CPSF1-210ENST00000532935 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
CPSF1-210ENST00000532935 KRTAP10-8P60410 259 aa9.33□□□□□ -0.92
CPSF1-210ENST00000532935 NKAPP1Q8N9T2 125 aa9.33□□□□□ -0.92
CPSF1-210ENST00000532935 LINC00167Q96N53 147 aa9.33□□□□□ -0.92
CPSF1-210ENST00000532935 SND1-IT1Q9HBX3 110 aa9.33□□□□□ -0.92
CPSF1-210ENST00000532935 TIMM17BO60830 172 aa9.32□□□□□ -0.92
CPSF1-210ENST00000532935 HERV-K104P63124 156 aa9.32□□□□□ -0.92
CPSF1-210ENST00000532935 Q6ZVH6 145 aa9.32□□□□□ -0.92
CPSF1-210ENST00000532935 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
CPSF1-210ENST00000532935 RPL37AP8A6NKH3 93 aa9.31□□□□□ -0.92
CPSF1-210ENST00000532935 TMEM238C9JI98 176 aa9.31□□□□□ -0.92
CPSF1-210ENST00000532935 CEND1Q8N111 149 aa9.31□□□□□ -0.92
CPSF1-210ENST00000532935 HIST1H4GQ99525 98 aa9.31□□□□□ -0.92
CPSF1-210ENST00000532935 A0A0J9YXY3 114 aa9.3□□□□□ -0.92
CPSF1-210ENST00000532935 A6NDN8 102 aa9.3□□□□□ -0.92
CPSF1-210ENST00000532935 ZNF861PO60384 105 aa9.29□□□□□ -0.92
CPSF1-210ENST00000532935 VPREB1P12018 145 aa9.29□□□□□ -0.92
CPSF1-210ENST00000532935 LINC00158P58513 81 aa9.29□□□□□ -0.92
CPSF1-210ENST00000532935 BATFQ16520 125 aa9.29□□□□□ -0.92
CPSF1-210ENST00000532935 TMEM238LA0A1B0GVL6 79 aa9.28□□□□□ -0.92
CPSF1-210ENST00000532935 A6NJY4 79 aa9.28□□□□□ -0.92
CPSF1-210ENST00000532935 BCE1O60756 84 aa9.28□□□□□ -0.92
CPSF1-210ENST00000532935 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
CPSF1-210ENST00000532935 RPL24P83731 157 aaKnown RBP9.27□□□□□ -0.93
CPSF1-210ENST00000532935 COPS9Q8WXC6 57 aa9.27□□□□□ -0.93
CPSF1-210ENST00000532935 SPANXDQ9BXN6 97 aa9.27□□□□□ -0.93
CPSF1-210ENST00000532935 PPDPFQ9H3Y8 114 aa9.27□□□□□ -0.93
CPSF1-210ENST00000532935 SPANXCQ9NY87 97 aa9.27□□□□□ -0.93
CPSF1-210ENST00000532935 SMIM13P0DJ93 91 aa9.26□□□□□ -0.93
CPSF1-210ENST00000532935 IFITM1P13164 125 aa9.26□□□□□ -0.93
CPSF1-210ENST00000532935 MEIG1Q5JSS6 88 aa9.26□□□□□ -0.93
CPSF1-210ENST00000532935 Q8NDZ9 215 aa9.26□□□□□ -0.93
CPSF1-210ENST00000532935 IGKV2-28A0A075B6P5 120 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms