RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 LINC00304Q8N9R0 145 aa5.14□□□□□ -1.59
USF1-210ENST00000531842 IGKV2-28A0A075B6P5 120 aa5.13□□□□□ -1.59
USF1-210ENST00000531842 IGKV2D-26A0A0A0MRZ7 120 aa5.13□□□□□ -1.59
USF1-210ENST00000531842 H3BRM9 83 aa5.13□□□□□ -1.59
USF1-210ENST00000531842 IGKV2D-28P01615 120 aa5.13□□□□□ -1.59
USF1-210ENST00000531842 PFN2P35080 140 aa5.13□□□□□ -1.59
USF1-210ENST00000531842 LINC01547P58512 204 aaPredicted RBP5.13□□□□□ -1.59
USF1-210ENST00000531842 FAM19A2Q8N3H0 131 aa5.13□□□□□ -1.59
USF1-210ENST00000531842 Q8NDZ9 215 aa5.13□□□□□ -1.59
USF1-210ENST00000531842 PPDPFQ9H3Y8 114 aa5.13□□□□□ -1.59
USF1-210ENST00000531842 SCO1O75880 301 aa5.12□□□□□ -1.59
USF1-210ENST00000531842 NDUFA6P56556 154 aa5.12□□□□□ -1.59
USF1-210ENST00000531842 BAGE3Q86Y29 109 aa5.12□□□□□ -1.59
USF1-210ENST00000531842 CHCHD1Q96BP2 118 aaKnown RBP5.12□□□□□ -1.59
USF1-210ENST00000531842 IGLV5-37A0A075B6J1 123 aa5.11□□□□□ -1.59
USF1-210ENST00000531842 FAM229BQ4G0N7 80 aa5.11□□□□□ -1.59
USF1-210ENST00000531842 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
USF1-210ENST00000531842 FAM19A1Q7Z5A9 133 aa5.11□□□□□ -1.59
USF1-210ENST00000531842 C3orf22Q8N5N4 141 aa5.11□□□□□ -1.59
USF1-210ENST00000531842 SERF1AO75920 110 aa5.1□□□□□ -1.59
USF1-210ENST00000531842 PRLHP81277 87 aa5.1□□□□□ -1.59
USF1-210ENST00000531842 RPL24P83731 157 aaKnown RBP5.1□□□□□ -1.59
USF1-210ENST00000531842 KRTAP13-1Q8IUC0 172 aa5.1□□□□□ -1.59
USF1-210ENST00000531842 ZNF625Q96I27 306 aaPredicted RBP5.1□□□□□ -1.59
USF1-210ENST00000531842 TRAV12-1A0A0B4J245 112 aa5.09□□□□□ -1.59
USF1-210ENST00000531842 TMEM238C9JI98 176 aa5.09□□□□□ -1.59
USF1-210ENST00000531842 IFI27L1Q96BM0 104 aa5.09□□□□□ -1.59
USF1-210ENST00000531842 TMEM126AQ9H061 195 aa5.09□□□□□ -1.59
USF1-210ENST00000531842 CHTOPQ9Y3Y2 248 aaKnown RBP5.09□□□□□ -1.59
USF1-210ENST00000531842 TMEM223A0PJW6 202 aa5.08□□□□□ -1.6
USF1-210ENST00000531842 SND1-IT1Q9HBX3 110 aa5.08□□□□□ -1.6
USF1-210ENST00000531842 ERG28Q9UKR5 140 aa5.08□□□□□ -1.6
USF1-210ENST00000531842 KRTAP13-3Q3SY46 172 aa5.07□□□□□ -1.6
USF1-210ENST00000531842 ASB16-AS1Q495Z4 193 aa5.07□□□□□ -1.6
USF1-210ENST00000531842 TMEM170BQ5T4T1 132 aa5.07□□□□□ -1.6
USF1-210ENST00000531842 HIGD2AQ9BW72 106 aa5.07□□□□□ -1.6
USF1-210ENST00000531842 M0R378 163 aa5.06□□□□□ -1.6
USF1-210ENST00000531842 HSBP1O75506 76 aa5.06□□□□□ -1.6
USF1-210ENST00000531842 VPREB1P12018 145 aa5.06□□□□□ -1.6
USF1-210ENST00000531842 TSPEAR-AS2P59090 65 aa5.06□□□□□ -1.6
USF1-210ENST00000531842 COX17Q14061 63 aa5.06□□□□□ -1.6
USF1-210ENST00000531842 PLEKHB2Q96CS7 222 aa5.06□□□□□ -1.6
USF1-210ENST00000531842 HIST1H2BKO60814 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST1H2BJP06899 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST1H2BOP23527 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST1H2BBP33778 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 LINC00158P58513 81 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST1H2BDP58876 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST1H2BCP62807 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST2H2BEQ16778 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 C4orf48Q5BLP8 95 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST1H2BHQ93079 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST1H2BNQ99877 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 HIST1H2BMQ99879 126 aa5.05□□□□□ -1.6
USF1-210ENST00000531842 A0A0U1RRA0 63 aa5.04□□□□□ -1.6
USF1-210ENST00000531842 ATP6V1G1O75348 118 aa5.04□□□□□ -1.6
USF1-210ENST00000531842 MT1HP80294 61 aa5.04□□□□□ -1.6
USF1-210ENST00000531842 SFTA2Q6UW10 78 aa5.04□□□□□ -1.6
USF1-210ENST00000531842 LINC00337Q8N6G1 96 aa5.04□□□□□ -1.6
USF1-210ENST00000531842 DAND5Q8N907 189 aa5.04□□□□□ -1.6
USF1-210ENST00000531842 PMCHL2Q9BQD1 86 aa5.04□□□□□ -1.6
USF1-210ENST00000531842 H0Y8G0 127 aa5.03□□□□□ -1.6
USF1-210ENST00000531842 LEPROTL1O95214 131 aa5.03□□□□□ -1.6
USF1-210ENST00000531842 FABP4P15090 132 aa5.03□□□□□ -1.6
USF1-210ENST00000531842 CTAG1AP78358 180 aa5.03□□□□□ -1.6
USF1-210ENST00000531842 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
USF1-210ENST00000531842 SMIM13P0DJ93 91 aa5.02□□□□□ -1.61
USF1-210ENST00000531842 ZNF706Q9Y5V0 76 aaPredicted RBP5.02□□□□□ -1.61
USF1-210ENST00000531842 SPRR4Q96PI1 79 aa5.01□□□□□ -1.61
USF1-210ENST00000531842 EIF4EBP3O60516 100 aaPredicted RBP5□□□□□ -1.61
USF1-210ENST00000531842 MEIG1Q5JSS6 88 aa5□□□□□ -1.61
USF1-210ENST00000531842 BOD1L2Q8IYS8 172 aa5□□□□□ -1.61
USF1-210ENST00000531842 NDUFA12Q9UI09 145 aa5□□□□□ -1.61
USF1-210ENST00000531842 ETDCA0A1B0GVM5 59 aa4.99□□□□□ -1.61
USF1-210ENST00000531842 NCR3O14931 201 aa4.99□□□□□ -1.61
USF1-210ENST00000531842 FP248Q71RG6 208 aaPredicted RBP4.99□□□□□ -1.61
USF1-210ENST00000531842 MIR7-3HGQ8N6C7 128 aa4.99□□□□□ -1.61
USF1-210ENST00000531842 Q8NBF4 154 aa4.99□□□□□ -1.61
USF1-210ENST00000531842 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
USF1-210ENST00000531842 HSPB8Q9UJY1 196 aa4.99□□□□□ -1.61
USF1-210ENST00000531842 PRYO14603 147 aa4.98□□□□□ -1.61
USF1-210ENST00000531842 LEPROTO15243 131 aa4.98□□□□□ -1.61
USF1-210ENST00000531842 DPM2O94777 84 aa4.98□□□□□ -1.61
USF1-210ENST00000531842 LORP23490 312 aaPredicted RBP4.98□□□□□ -1.61
USF1-210ENST00000531842 PLNP26678 52 aa4.98□□□□□ -1.61
USF1-210ENST00000531842 KRTAP10-6P60371 365 aaPredicted RBP4.98□□□□□ -1.61
USF1-210ENST00000531842 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
USF1-210ENST00000531842 S100A12P80511 92 aa4.98□□□□□ -1.61
USF1-210ENST00000531842 COA6Q5JTJ3 125 aaKnown RBP4.98□□□□□ -1.61
USF1-210ENST00000531842 SMCR5Q8TEV8 140 aa4.98□□□□□ -1.61
USF1-210ENST00000531842 LOC107984156A0A0G2JMH3 177 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 LINC00587B1AMM8 73 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 KRTAP4-16G5E9R7 235 aaPredicted RBP4.97□□□□□ -1.61
USF1-210ENST00000531842 SYS1-DBNDD2H3BUS1 97 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 J3QQQ9 107 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 IGKCP01834 107 aa4.97□□□□□ -1.61
USF1-210ENST00000531842 ADAMTSL4-AS1Q5T5F5 129 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms