RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 LINC00173Q6ZV60 143 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 LINC01551Q86U37 167 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 OR5A1Q8NGJ0 315 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 TMEM191AQ9H0A3 160 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 ST20Q9HBF5 79 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 OSTCQ9NRP0 149 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 DHRS4-AS1Q9P1J3 65 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 GVQW2A0A096LPI5 108 aaPredicted RBP2.91□□□□□ -1.94
CASP4-210ENST00000531546 TRBV27A0A0K0K1C4 114 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 PSPHP1O15172 72 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 SRP19P09132 144 aaKnown RBP2.91□□□□□ -1.94
CASP4-210ENST00000531546 POLR2KP53803 58 aaKnown RBP2.91□□□□□ -1.94
CASP4-210ENST00000531546 PMAIP1Q13794 54 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 PMVKQ15126 192 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 TMEM241Q24JQ0 296 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 C15orf56Q8N910 161 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 OR13C6PQ8NH95 151 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 SPACA4Q8TDM5 124 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 PLAC8Q9NZF1 115 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 PKIGQ9Y2B9 76 aa2.91□□□□□ -1.94
CASP4-210ENST00000531546 IGHV1-58A0A0C4DH39 117 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 LINC00959A0A1B0GUT2 108 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 C7orf77A4D0Y5 90 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 CCL25O15444 150 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 CHTF8P0CG12 524 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 FCER1GP30273 86 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 XCL1P47992 114 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 COX6A2Q02221 97 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 SS18Q15532 418 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 C6orf99Q4VX62 202 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 AMN1Q8IY45 258 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 ZNF664Q8N3J9 261 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 LINC00337Q8N6G1 96 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 NUP35Q8NFH5 326 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 C7orf33Q8WU49 177 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 LINC01600Q96MT4 127 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 GNB1LQ9BYB4 327 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 CDC42SE2Q9NRR3 84 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 TMEM242Q9NWH2 141 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 LINC00474Q9P2X8 69 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 NAT8BQ9UHF3 227 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 V9GYV3 84 aa2.9□□□□□ -1.95
CASP4-210ENST00000531546 SMIM26A0A096LP01 95 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 IGKV2-24A0A0C4DH68 120 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 C1orf196B1AJZ1 125 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 DDTP30046 118 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 RPL23P62829 140 aaKnown RBP2.89□□□□□ -1.95
CASP4-210ENST00000531546 PEA15Q15121 130 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 ADIRFQ15847 76 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 FAM104BQ5XKR9 115 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 SMDT1Q9H4I9 107 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 SPANXA1Q9NS26 97 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 NAT8Q9UHE5 227 aa2.89□□□□□ -1.95
CASP4-210ENST00000531546 TRBV24-1A0A075B6N3 115 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 IGHV6-1A0A0B4J1U7 121 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 SMIM27A0A1W2PRY6 76 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 C9JQL5 133 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 COX7A2LO14548 114 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 CKS2P33552 79 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 SYCNQ0VAF6 134 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 BATFQ16520 125 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 CARD19Q96LW7 228 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 C20orf78Q9BR46 151 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 VPS25Q9BRG1 176 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 TIMM21Q9BVV7 248 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 RBM12B-AS1Q9P1G2 102 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 UBE2D4Q9Y2X8 147 aa2.88□□□□□ -1.95
CASP4-210ENST00000531546 A0A096LNI7 61 aa2.87□□□□□ -1.95
CASP4-210ENST00000531546 TRAV13-1A0A0B4J241 112 aa2.87□□□□□ -1.95
CASP4-210ENST00000531546 KRTAP4-16G5E9R7 235 aaPredicted RBP2.87□□□□□ -1.95
CASP4-210ENST00000531546 APOMO95445 188 aa2.87□□□□□ -1.95
CASP4-210ENST00000531546 HBBP68871 147 aa2.87□□□□□ -1.95
CASP4-210ENST00000531546 JOSD1Q15040 202 aaPredicted RBP2.87□□□□□ -1.95
CASP4-210ENST00000531546 MRPL51Q4U2R6 128 aaKnown RBP2.87□□□□□ -1.95
CASP4-210ENST00000531546 COA6Q5JTJ3 125 aaKnown RBP2.87□□□□□ -1.95
CASP4-210ENST00000531546 C2orf66Q6UXQ4 117 aa2.87□□□□□ -1.95
CASP4-210ENST00000531546 SCGB1D4Q6XE38 83 aa2.87□□□□□ -1.95
CASP4-210ENST00000531546 LINC00526Q96FQ7 95 aa2.87□□□□□ -1.95
CASP4-210ENST00000531546 SS18L2Q9UHA2 77 aa2.87□□□□□ -1.95
CASP4-210ENST00000531546 IGLV4-69A0A075B6H9 119 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 LOC107984640A0A0U1RRK4 108 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 FAM236DA0A1B0GTK5 79 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 LOC389332A0A1B0GUA5 103 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 D6R8Y8 96 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 FAM236CP0DP71 79 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 RNASE13Q5GAN3 156 aaKnown RBP2.86□□□□□ -1.95
CASP4-210ENST00000531546 MRPL54Q6P161 138 aaKnown RBP2.86□□□□□ -1.95
CASP4-210ENST00000531546 Q6ZUT4 128 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 C5orf38Q86SI9 138 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 CAMK2N2Q96S95 79 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 SMIM2Q9BVW6 85 aa2.86□□□□□ -1.95
CASP4-210ENST00000531546 RPL39P62891 51 aaKnown RBP2.85□□□□□ -1.95
CASP4-210ENST00000531546 CXCL6P80162 114 aa2.85□□□□□ -1.95
CASP4-210ENST00000531546 MRPS36P82909 103 aaKnown RBP2.85□□□□□ -1.95
CASP4-210ENST00000531546 SPAG11BQ08648 103 aa2.85□□□□□ -1.95
CASP4-210ENST00000531546 SPINK6Q6UWN8 80 aa2.85□□□□□ -1.95
CASP4-210ENST00000531546 TMEM136Q6ZRR5 245 aa2.85□□□□□ -1.95
CASP4-210ENST00000531546 ATP5L2Q7Z4Y8 100 aa2.85□□□□□ -1.95
CASP4-210ENST00000531546 ORMDL3Q8N138 153 aa2.85□□□□□ -1.95
CASP4-210ENST00000531546 OR10D4PQ8NGN7 298 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms