RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 C22orf24Q9Y442 160 aa11.59□□□□□ -0.55
UBXN1-211ENST00000531056 HERVK_113P61574 105 aa11.57□□□□□ -0.56
UBXN1-211ENST00000531056 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
UBXN1-211ENST00000531056 AKR1D1P51857 326 aa11.55□□□□□ -0.56
UBXN1-211ENST00000531056 KRTAP10-8P60410 259 aa11.55□□□□□ -0.56
UBXN1-211ENST00000531056 PLA2G2DQ9UNK4 145 aa11.55□□□□□ -0.56
UBXN1-211ENST00000531056 SFTA2Q6UW10 78 aa11.54□□□□□ -0.56
UBXN1-211ENST00000531056 TMA7Q9Y2S6 64 aaKnown RBP11.54□□□□□ -0.56
UBXN1-211ENST00000531056 LBHQ53QV2 105 aaPredicted RBP11.53□□□□□ -0.56
UBXN1-211ENST00000531056 MRPL55Q7Z7F7 128 aaKnown RBP11.53□□□□□ -0.56
UBXN1-211ENST00000531056 DIRC1Q969H9 104 aa11.53□□□□□ -0.56
UBXN1-211ENST00000531056 HMCN2Q8NDA2 5059 aa11.53□□□□□ -0.56
UBXN1-211ENST00000531056 IGLV5-37A0A075B6J1 123 aa11.52□□□□□ -0.57
UBXN1-211ENST00000531056 H0Y9J4 135 aa11.51□□□□□ -0.57
UBXN1-211ENST00000531056 LEPROTO15243 131 aa11.51□□□□□ -0.57
UBXN1-211ENST00000531056 PFN2P35080 140 aa11.51□□□□□ -0.57
UBXN1-211ENST00000531056 PLEKHB2Q96CS7 222 aa11.51□□□□□ -0.57
UBXN1-211ENST00000531056 ZNF625Q96I27 306 aaPredicted RBP11.51□□□□□ -0.57
UBXN1-211ENST00000531056 ERG28Q9UKR5 140 aa11.51□□□□□ -0.57
UBXN1-211ENST00000531056 COX17Q14061 63 aa11.49□□□□□ -0.57
UBXN1-211ENST00000531056 E9PLD3 99 aa11.48□□□□□ -0.57
UBXN1-211ENST00000531056 LINC00167Q96N53 147 aa11.48□□□□□ -0.57
UBXN1-211ENST00000531056 LGALS3P17931 250 aaKnown RBP11.47□□□□□ -0.57
UBXN1-211ENST00000531056 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
UBXN1-211ENST00000531056 J3QQQ9 107 aa11.46□□□□□ -0.57
UBXN1-211ENST00000531056 NDUFA12Q9UI09 145 aa11.46□□□□□ -0.57
UBXN1-211ENST00000531056 MYMXA0A1B0GTQ4 84 aa11.45□□□□□ -0.58
UBXN1-211ENST00000531056 RPL37AP8A6NKH3 93 aa11.45□□□□□ -0.58
UBXN1-211ENST00000531056 ZNF861PO60384 105 aa11.45□□□□□ -0.58
UBXN1-211ENST00000531056 KRTAP1-4P0C5Y4 121 aa11.45□□□□□ -0.58
UBXN1-211ENST00000531056 HERV-K104P63124 156 aa11.45□□□□□ -0.58
UBXN1-211ENST00000531056 ATOH7Q8N100 152 aa11.45□□□□□ -0.58
UBXN1-211ENST00000531056 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
UBXN1-211ENST00000531056 GAGE10A6NGK3 116 aa11.44□□□□□ -0.58
UBXN1-211ENST00000531056 VPREB1P12018 145 aa11.44□□□□□ -0.58
UBXN1-211ENST00000531056 NMUP48645 174 aa11.44□□□□□ -0.58
UBXN1-211ENST00000531056 TSPEAR-AS2P59090 65 aa11.44□□□□□ -0.58
UBXN1-211ENST00000531056 BCE1O60756 84 aa11.43□□□□□ -0.58
UBXN1-211ENST00000531056 SCGB1D1O95968 90 aa11.43□□□□□ -0.58
UBXN1-211ENST00000531056 Q8NDZ9 215 aa11.42□□□□□ -0.58
UBXN1-211ENST00000531056 LINC00587B1AMM8 73 aa11.41□□□□□ -0.58
UBXN1-211ENST00000531056 PRR26Q8N8Z3 221 aa11.41□□□□□ -0.58
UBXN1-211ENST00000531056 HSBP1L1C9JCN9 74 aa11.4□□□□□ -0.58
UBXN1-211ENST00000531056 MEIG1Q5JSS6 88 aa11.4□□□□□ -0.58
UBXN1-211ENST00000531056 LINC00158P58513 81 aa11.39□□□□□ -0.59
UBXN1-211ENST00000531056 IGKV2D-26A0A0A0MRZ7 120 aa11.38□□□□□ -0.59
UBXN1-211ENST00000531056 RPL28P46779 137 aaKnown RBP11.38□□□□□ -0.59
UBXN1-211ENST00000531056 RPL24P83731 157 aaKnown RBP11.38□□□□□ -0.59
UBXN1-211ENST00000531056 ANKRD39Q53RE8 183 aa11.38□□□□□ -0.59
UBXN1-211ENST00000531056 IGLV1-50A0A075B6I6 118 aa11.37□□□□□ -0.59
UBXN1-211ENST00000531056 IGKV2-28A0A075B6P5 120 aa11.37□□□□□ -0.59
UBXN1-211ENST00000531056 IGKV2D-28P01615 120 aa11.37□□□□□ -0.59
UBXN1-211ENST00000531056 KRTAP13-1Q8IUC0 172 aa11.37□□□□□ -0.59
UBXN1-211ENST00000531056 A0A0U1RRA0 63 aa11.36□□□□□ -0.59
UBXN1-211ENST00000531056 SMIM13P0DJ93 91 aa11.36□□□□□ -0.59
UBXN1-211ENST00000531056 ZNF815PA8K554 130 aa11.35□□□□□ -0.59
UBXN1-211ENST00000531056 JOSD1Q15040 202 aaPredicted RBP11.35□□□□□ -0.59
UBXN1-211ENST00000531056 A0A0J9YXY3 114 aa11.33□□□□□ -0.6
UBXN1-211ENST00000531056 MIR7-3HGQ8N6C7 128 aa11.32□□□□□ -0.6
UBXN1-211ENST00000531056 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
UBXN1-211ENST00000531056 UBE2AP49459 152 aa11.31□□□□□ -0.6
UBXN1-211ENST00000531056 TTTY13Q9BZ97 58 aa11.31□□□□□ -0.6
UBXN1-211ENST00000531056 TMEM126AQ9H061 195 aa11.31□□□□□ -0.6
UBXN1-211ENST00000531056 M0R378 163 aa11.3□□□□□ -0.6
UBXN1-211ENST00000531056 RPL13AP40429 203 aaKnown RBP11.3□□□□□ -0.6
UBXN1-211ENST00000531056 TIMM17BO60830 172 aa11.28□□□□□ -0.6
UBXN1-211ENST00000531056 SCGB1D4Q6XE38 83 aa11.28□□□□□ -0.6
UBXN1-211ENST00000531056 PCP2Q8IVA1 136 aa11.28□□□□□ -0.6
UBXN1-211ENST00000531056 BOD1L2Q8IYS8 172 aa11.28□□□□□ -0.6
UBXN1-211ENST00000531056 PRLHP81277 87 aa11.27□□□□□ -0.61
UBXN1-211ENST00000531056 FAM19A1Q7Z5A9 133 aa11.27□□□□□ -0.61
UBXN1-211ENST00000531056 VAMP8Q9BV40 100 aa11.27□□□□□ -0.61
UBXN1-211ENST00000531056 PYY3Q5JQD4 70 aa11.26□□□□□ -0.61
UBXN1-211ENST00000531056 DAND5Q8N907 189 aa11.26□□□□□ -0.61
UBXN1-211ENST00000531056 MIEN1Q9BRT3 115 aa11.26□□□□□ -0.61
UBXN1-211ENST00000531056 A0A087X002 238 aa11.25□□□□□ -0.61
UBXN1-211ENST00000531056 LOC107984156A0A0G2JMH3 177 aa11.25□□□□□ -0.61
UBXN1-211ENST00000531056 ARL17AQ8IVW1 177 aa11.25□□□□□ -0.61
UBXN1-211ENST00000531056 PAM16Q9Y3D7 125 aa11.25□□□□□ -0.61
UBXN1-211ENST00000531056 NCR3O14931 201 aa11.24□□□□□ -0.61
UBXN1-211ENST00000531056 SPATA45Q537H7 98 aa11.23□□□□□ -0.61
UBXN1-211ENST00000531056 ADAMTSL4-AS1Q5T5F5 129 aa11.23□□□□□ -0.61
UBXN1-211ENST00000531056 LITAFQ99732 161 aa11.23□□□□□ -0.61
UBXN1-211ENST00000531056 PRYO14603 147 aa11.21□□□□□ -0.61
UBXN1-211ENST00000531056 COX8AP10176 69 aa11.21□□□□□ -0.61
UBXN1-211ENST00000531056 CRYGAP11844 174 aa11.21□□□□□ -0.61
UBXN1-211ENST00000531056 ANAPC11Q9NYG5 84 aa11.21□□□□□ -0.61
UBXN1-211ENST00000531056 UBR4Q5T4S7 5183 aa11.2□□□□□ -0.62
UBXN1-211ENST00000531056 KCNQ1DNQ9H478 68 aa11.2□□□□□ -0.62
UBXN1-211ENST00000531056 LRP2P98164 4655 aa11.2□□□□□ -0.62
UBXN1-211ENST00000531056 SPRR1AP35321 89 aa11.19□□□□□ -0.62
UBXN1-211ENST00000531056 NPC2P61916 151 aa11.19□□□□□ -0.62
UBXN1-211ENST00000531056 SPANXDQ9BXN6 97 aa11.19□□□□□ -0.62
UBXN1-211ENST00000531056 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
UBXN1-211ENST00000531056 TRBV10-3A0A0K0K1G6 114 aa11.18□□□□□ -0.62
UBXN1-211ENST00000531056 FAM229BQ4G0N7 80 aa11.18□□□□□ -0.62
UBXN1-211ENST00000531056 KRTAP13-2Q52LG2 175 aa11.18□□□□□ -0.62
UBXN1-211ENST00000531056 Q6ZVH6 145 aa11.18□□□□□ -0.62
UBXN1-211ENST00000531056 LINC00308Q8TCZ7 52 aa11.18□□□□□ -0.62
UBXN1-211ENST00000531056 DLEU1O43261 78 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms