RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 NCR3O14931 201 aa11.57□□□□□ -0.56
BRCA2-204ENST00000530893 Q8NDZ9 215 aa11.57□□□□□ -0.56
BRCA2-204ENST00000530893 RETNQ9HD89 108 aa11.57□□□□□ -0.56
BRCA2-204ENST00000530893 C14orf132Q9NPU4 83 aa11.57□□□□□ -0.56
BRCA2-204ENST00000530893 SLPIP03973 132 aa11.57□□□□□ -0.56
BRCA2-204ENST00000530893 C9orf129Q5T035 196 aaKnown RBP11.57□□□□□ -0.56
BRCA2-204ENST00000530893 Q6ZTC4 211 aa11.57□□□□□ -0.56
BRCA2-204ENST00000530893 C6orf99Q4VX62 202 aa11.56□□□□□ -0.56
BRCA2-204ENST00000530893 WFDC10BQ8IUB3 73 aa11.56□□□□□ -0.56
BRCA2-204ENST00000530893 IGLV6-57P01721 117 aa11.55□□□□□ -0.56
BRCA2-204ENST00000530893 KRTAP24-1Q3LI83 254 aa11.55□□□□□ -0.56
BRCA2-204ENST00000530893 LINC00526Q96FQ7 95 aa11.55□□□□□ -0.56
BRCA2-204ENST00000530893 C6orf48Q9UBA6 75 aa11.55□□□□□ -0.56
BRCA2-204ENST00000530893 C3orf56Q8N813 242 aa11.54□□□□□ -0.56
BRCA2-204ENST00000530893 ZNF561-AS1K7EIQ3 104 aa11.53□□□□□ -0.56
BRCA2-204ENST00000530893 LINC00575Q6W349 94 aa11.53□□□□□ -0.56
BRCA2-204ENST00000530893 KRTAP26-1Q6PEX3 210 aa11.52□□□□□ -0.56
BRCA2-204ENST00000530893 RPL18AQ02543 176 aaKnown RBP11.5□□□□□ -0.57
BRCA2-204ENST00000530893 ESRGQ1W209 222 aa11.5□□□□□ -0.57
BRCA2-204ENST00000530893 LINC01556Q5JQF7 62 aa11.5□□□□□ -0.57
BRCA2-204ENST00000530893 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
BRCA2-204ENST00000530893 CAMK2N2Q96S95 79 aa11.5□□□□□ -0.57
BRCA2-204ENST00000530893 F8P00451 2351 aa11.49□□□□□ -0.57
BRCA2-204ENST00000530893 hADV29S1A0JD25 119 aa11.49□□□□□ -0.57
BRCA2-204ENST00000530893 F8WDY8 70 aa11.49□□□□□ -0.57
BRCA2-204ENST00000530893 H3BQ85 93 aa11.49□□□□□ -0.57
BRCA2-204ENST00000530893 CCKP06307 115 aa11.49□□□□□ -0.57
BRCA2-204ENST00000530893 DEFB131BA0A096LNP1 70 aa11.48□□□□□ -0.57
BRCA2-204ENST00000530893 C11orf45Q8TAV5 145 aa11.48□□□□□ -0.57
BRCA2-204ENST00000530893 FAM236AA0A1B0GUQ0 79 aa11.47□□□□□ -0.57
BRCA2-204ENST00000530893 FAM236BA0A1B0GV22 79 aa11.47□□□□□ -0.57
BRCA2-204ENST00000530893 C1orf43Q9BWL3 253 aa11.47□□□□□ -0.57
BRCA2-204ENST00000530893 LINC00846Q9NV44 126 aa11.47□□□□□ -0.57
BRCA2-204ENST00000530893 Q6JHZ5 121 aa11.46□□□□□ -0.57
BRCA2-204ENST00000530893 C15orf56Q8N910 161 aa11.46□□□□□ -0.57
BRCA2-204ENST00000530893 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
BRCA2-204ENST00000530893 HIGD2BQ4VC39 106 aa11.45□□□□□ -0.58
BRCA2-204ENST00000530893 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
BRCA2-204ENST00000530893 TRBV10-3A0A0K0K1G6 114 aa11.45□□□□□ -0.58
BRCA2-204ENST00000530893 DIRC1Q969H9 104 aa11.45□□□□□ -0.58
BRCA2-204ENST00000530893 TRBV7-6A0A0J9YX20 115 aa11.44□□□□□ -0.58
BRCA2-204ENST00000530893 ANK2Q01484 3957 aa11.44□□□□□ -0.58
BRCA2-204ENST00000530893 NDUFC2-KCTD14E9PQ53 114 aa11.43□□□□□ -0.58
BRCA2-204ENST00000530893 CMYA5Q8N3K9 4069 aa11.43□□□□□ -0.58
BRCA2-204ENST00000530893 GHRHP01286 108 aa11.43□□□□□ -0.58
BRCA2-204ENST00000530893 Q6ZRU5 148 aa11.43□□□□□ -0.58
BRCA2-204ENST00000530893 CCDC179H3BU77 68 aa11.42□□□□□ -0.58
BRCA2-204ENST00000530893 VPREB1P12018 145 aa11.42□□□□□ -0.58
BRCA2-204ENST00000530893 DNAH10OSP0CZ25 163 aa11.42□□□□□ -0.58
BRCA2-204ENST00000530893 ZNF73O43830 326 aaPredicted RBP11.41□□□□□ -0.58
BRCA2-204ENST00000530893 DNAH3Q8TD57 4116 aa11.4□□□□□ -0.58
BRCA2-204ENST00000530893 M0R378 163 aa11.4□□□□□ -0.58
BRCA2-204ENST00000530893 B5MCH6 92 aa11.4□□□□□ -0.59
BRCA2-204ENST00000530893 IGKV2D-24A0A075B6R9 120 aa11.39□□□□□ -0.59
BRCA2-204ENST00000530893 RBM3P98179 157 aaKnown RBP11.39□□□□□ -0.59
BRCA2-204ENST00000530893 LOC110117498A0A087WWA1 95 aa11.38□□□□□ -0.59
BRCA2-204ENST00000530893 ELOF1P60002 83 aaKnown RBP11.38□□□□□ -0.59
BRCA2-204ENST00000530893 HIST1H4AP62805 103 aaKnown RBP11.38□□□□□ -0.59
BRCA2-204ENST00000530893 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.38□□□□□ -0.59
BRCA2-204ENST00000530893 TRAV10A0A0B4J240 114 aa11.38□□□□□ -0.59
BRCA2-204ENST00000530893 COX7BP24311 80 aa11.38□□□□□ -0.59
BRCA2-204ENST00000530893 ATP5EP2Q5VTU8 51 aa11.38□□□□□ -0.59
BRCA2-204ENST00000530893 Q6ZQY7 126 aa11.37□□□□□ -0.59
BRCA2-204ENST00000530893 PDE6GP18545 87 aa11.36□□□□□ -0.59
BRCA2-204ENST00000530893 LAMTOR3Q9UHA4 124 aa11.36□□□□□ -0.59
BRCA2-204ENST00000530893 SYCNQ0VAF6 134 aa11.36□□□□□ -0.59
BRCA2-204ENST00000530893 Q6ZQT0 140 aa11.35□□□□□ -0.59
BRCA2-204ENST00000530893 FBN1P35555 2871 aaKnown RBP11.35□□□□□ -0.59
BRCA2-204ENST00000530893 PKD1L1Q8TDX9 2849 aa11.34□□□□□ -0.59
BRCA2-204ENST00000530893 IGKV3D-7A0A0C4DH55 119 aa11.34□□□□□ -0.59
BRCA2-204ENST00000530893 ATOX1O00244 68 aa11.34□□□□□ -0.59
BRCA2-204ENST00000530893 Q6ZRP5 223 aa11.34□□□□□ -0.59
BRCA2-204ENST00000530893 UBL5Q9BZL1 73 aa11.33□□□□□ -0.6
BRCA2-204ENST00000530893 STAB1Q9NY15 2570 aa11.33□□□□□ -0.6
BRCA2-204ENST00000530893 TENM3Q9P273 2699 aa11.33□□□□□ -0.6
BRCA2-204ENST00000530893 DSCR8Q96T75 97 aa11.33□□□□□ -0.6
BRCA2-204ENST00000530893 TM2D3Q9BRN9 247 aa11.33□□□□□ -0.6
BRCA2-204ENST00000530893 UQCRQO14949 82 aa11.31□□□□□ -0.6
BRCA2-204ENST00000530893 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
BRCA2-204ENST00000530893 LINC00528Q8N1L1 170 aa11.3□□□□□ -0.6
BRCA2-204ENST00000530893 C3orf22Q8N5N4 141 aa11.3□□□□□ -0.6
BRCA2-204ENST00000530893 LINC00588Q9Y4M8 146 aa11.3□□□□□ -0.6
BRCA2-204ENST00000530893 RMI2Q96E14 147 aa11.28□□□□□ -0.6
BRCA2-204ENST00000530893 PLA2G2DQ9UNK4 145 aa11.28□□□□□ -0.6
BRCA2-204ENST00000530893 COX7CP15954 63 aa11.27□□□□□ -0.61
BRCA2-204ENST00000530893 SS18L2Q9UHA2 77 aa11.27□□□□□ -0.61
BRCA2-204ENST00000530893 NKAPP1Q8N9T2 125 aa11.26□□□□□ -0.61
BRCA2-204ENST00000530893 MRAPQ8TCY5 172 aa11.26□□□□□ -0.61
BRCA2-204ENST00000530893 KCNQ1DNQ9H478 68 aa11.26□□□□□ -0.61
BRCA2-204ENST00000530893 TRBV7-4A0A0J9YYF1 115 aa11.25□□□□□ -0.61
BRCA2-204ENST00000530893 UPK3BQ9BT76 320 aa11.25□□□□□ -0.61
BRCA2-204ENST00000530893 A0A087WVE0 104 aa11.23□□□□□ -0.61
BRCA2-204ENST00000530893 K7EIL1 84 aa11.23□□□□□ -0.61
BRCA2-204ENST00000530893 C9orf153Q5TBE3 101 aa11.23□□□□□ -0.61
BRCA2-204ENST00000530893 USP17L23D6RBM5 183 aa11.22□□□□□ -0.61
BRCA2-204ENST00000530893 IGLV5-37A0A075B6J1 123 aa11.21□□□□□ -0.62
BRCA2-204ENST00000530893 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
BRCA2-204ENST00000530893 C7orf33Q8WU49 177 aa11.2□□□□□ -0.62
BRCA2-204ENST00000530893 PRB2P02812 416 aaPredicted RBP11.19□□□□□ -0.62
BRCA2-204ENST00000530893 SERP2Q8N6R1 65 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms