RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 MAGI3Q5TCQ9 1506 aa0.75□□□□□ -2.29
CAPRIN1-208ENST00000530008 SMIM31A0A1B0GVY4 71 aa0.75□□□□□ -2.29
CAPRIN1-208ENST00000530008 ACYP1P07311 99 aa0.75□□□□□ -2.29
CAPRIN1-208ENST00000530008 PLGLAQ15195 96 aa0.75□□□□□ -2.29
CAPRIN1-208ENST00000530008 DEFB121Q5J5C9 76 aa0.75□□□□□ -2.29
CAPRIN1-208ENST00000530008 UBE2D4Q9Y2X8 147 aa0.75□□□□□ -2.29
CAPRIN1-208ENST00000530008 TSC2P49815 1807 aa0.75□□□□□ -2.29
CAPRIN1-208ENST00000530008 URB1O60287 2271 aaKnown RBP0.75□□□□□ -2.29
CAPRIN1-208ENST00000530008 AHCTF1Q8WYP5 2266 aa0.75□□□□□ -2.29
CAPRIN1-208ENST00000530008 ABCC1P33527 1531 aa0.74□□□□□ -2.29
CAPRIN1-208ENST00000530008 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
CAPRIN1-208ENST00000530008 HMGN3Q15651 99 aa0.74□□□□□ -2.29
CAPRIN1-208ENST00000530008 HEPN1Q6WQI6 88 aa0.74□□□□□ -2.29
CAPRIN1-208ENST00000530008 POLR1AO95602 1720 aaPredicted RBP0.74□□□□□ -2.29
CAPRIN1-208ENST00000530008 DOT1LQ8TEK3 1739 aa0.74□□□□□ -2.29
CAPRIN1-208ENST00000530008 WIZO95785 1651 aa0.74□□□□□ -2.29
CAPRIN1-208ENST00000530008 INO80Q9ULG1 1556 aaPredicted RBP0.74□□□□□ -2.29
CAPRIN1-208ENST00000530008 SLIT1O75093 1534 aa0.74□□□□□ -2.29
CAPRIN1-208ENST00000530008 LRRC9Q6ZRR7 1453 aa0.73□□□□□ -2.29
CAPRIN1-208ENST00000530008 CEBPZOSA8MTT3 80 aa0.73□□□□□ -2.29
CAPRIN1-208ENST00000530008 H0Y9P7 68 aa0.73□□□□□ -2.29
CAPRIN1-208ENST00000530008 ABCA9Q8IUA7 1624 aa0.73□□□□□ -2.29
CAPRIN1-208ENST00000530008 USP32Q8NFA0 1604 aa0.73□□□□□ -2.29
CAPRIN1-208ENST00000530008 ATP7BP35670 1465 aa0.73□□□□□ -2.29
CAPRIN1-208ENST00000530008 CD163L1Q9NR16 1453 aa0.73□□□□□ -2.29
CAPRIN1-208ENST00000530008 PLCH1Q4KWH8 1693 aa0.72□□□□□ -2.29
CAPRIN1-208ENST00000530008 PAPPAQ13219 1627 aa0.72□□□□□ -2.29
CAPRIN1-208ENST00000530008 SAMD9Q5K651 1589 aa0.72□□□□□ -2.29
CAPRIN1-208ENST00000530008 TRBV7-4A0A0J9YYF1 115 aa0.72□□□□□ -2.29
CAPRIN1-208ENST00000530008 LINC00959A0A1B0GUT2 108 aa0.72□□□□□ -2.29
CAPRIN1-208ENST00000530008 SMIM13P0DJ93 91 aa0.72□□□□□ -2.29
CAPRIN1-208ENST00000530008 PLCE1Q9P212 2302 aa0.72□□□□□ -2.29
CAPRIN1-208ENST00000530008 CFAP43Q8NDM7 1665 aa0.72□□□□□ -2.29
CAPRIN1-208ENST00000530008 KIAA0556O60303 1618 aa0.71□□□□□ -2.3
CAPRIN1-208ENST00000530008 SETBP1Q9Y6X0 1596 aa0.71□□□□□ -2.3
CAPRIN1-208ENST00000530008 DOPEY2Q9Y3R5 2298 aa0.71□□□□□ -2.3
CAPRIN1-208ENST00000530008 ASXL1Q8IXJ9 1541 aa0.71□□□□□ -2.3
CAPRIN1-208ENST00000530008 FXYD6-FXYD2A0A087WZ82 144 aa0.71□□□□□ -2.3
CAPRIN1-208ENST00000530008 GNGT1P63211 74 aa0.71□□□□□ -2.3
CAPRIN1-208ENST00000530008 QSER1Q2KHR3 1735 aa0.71□□□□□ -2.3
CAPRIN1-208ENST00000530008 FMN2Q9NZ56 1722 aa0.71□□□□□ -2.3
CAPRIN1-208ENST00000530008 POLQO75417 2590 aa0.71□□□□□ -2.3
CAPRIN1-208ENST00000530008 CDC42BPGQ6DT37 1551 aa0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 AHNAK2Q8IVF2 5795 aa0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 LRRC7Q96NW7 1537 aa0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 DUOX2Q9NRD8 1548 aa0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 TULP4Q9NRJ4 1543 aa0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 RICTORQ6R327 1708 aa0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 NRAPQ86VF7 1730 aa0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 MACF1Q9UPN3 7388 aaKnown RBP0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 UMAD1C9J7I0 102 aa0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 HILPDAQ9Y5L2 63 aa0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 GOLGA4Q13439 2230 aaKnown RBP0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 THOC2Q8NI27 1593 aaKnown RBP0.7□□□□□ -2.3
CAPRIN1-208ENST00000530008 A0A0G2JMZ2 1700 aa0.69□□□□□ -2.3
CAPRIN1-208ENST00000530008 PREX1Q8TCU6 1659 aa0.69□□□□□ -2.3
CAPRIN1-208ENST00000530008 NESP48681 1621 aa0.69□□□□□ -2.3
CAPRIN1-208ENST00000530008 CCDC180Q9P1Z9 1646 aa0.69□□□□□ -2.3
CAPRIN1-208ENST00000530008 TRAV21A0A0B4J279 112 aa0.69□□□□□ -2.3
CAPRIN1-208ENST00000530008 A0A1B0GU69 56 aa0.69□□□□□ -2.3
CAPRIN1-208ENST00000530008 IFI6P09912 130 aa0.69□□□□□ -2.3
CAPRIN1-208ENST00000530008 HMGA1P17096 107 aaKnown RBP0.69□□□□□ -2.3
CAPRIN1-208ENST00000530008 EFCAB5A4FU69 1503 aa0.69□□□□□ -2.3
CAPRIN1-208ENST00000530008 CICQ96RK0 1608 aaPredicted RBP0.68□□□□□ -2.3
CAPRIN1-208ENST00000530008 PIEZO1Q92508 2521 aa0.68□□□□□ -2.3
CAPRIN1-208ENST00000530008 A0A1B0GUT8 65 aa0.68□□□□□ -2.3
CAPRIN1-208ENST00000530008 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
CAPRIN1-208ENST00000530008 DIP2AQ14689 1571 aa0.68□□□□□ -2.3
CAPRIN1-208ENST00000530008 CRIPTQ9P021 101 aa0.68□□□□□ -2.3
CAPRIN1-208ENST00000530008 KIF1AQ12756 1690 aa0.68□□□□□ -2.3
CAPRIN1-208ENST00000530008 USF3Q68DE3 2245 aa0.68□□□□□ -2.3
CAPRIN1-208ENST00000530008 NKTRP30414 1462 aaKnown RBP0.67□□□□□ -2.3
CAPRIN1-208ENST00000530008 GLI2P10070 1586 aa0.67□□□□□ -2.3
CAPRIN1-208ENST00000530008 IFI27P40305 119 aaPredicted RBP0.67□□□□□ -2.3
CAPRIN1-208ENST00000530008 DEFB112Q30KQ8 113 aa0.67□□□□□ -2.3
CAPRIN1-208ENST00000530008 DEFB123Q8N688 67 aa0.67□□□□□ -2.3
CAPRIN1-208ENST00000530008 URB2Q14146 1524 aaKnown RBP0.67□□□□□ -2.3
CAPRIN1-208ENST00000530008 EIF2AK4Q9P2K8 1649 aaKnown RBP0.67□□□□□ -2.3
CAPRIN1-208ENST00000530008 TJP1Q07157 1748 aa0.67□□□□□ -2.3
CAPRIN1-208ENST00000530008 A0A087WXM4 84 aa0.66□□□□□ -2.3
CAPRIN1-208ENST00000530008 H3BVH4 76 aa0.66□□□□□ -2.3
CAPRIN1-208ENST00000530008 COX8AP10176 69 aa0.66□□□□□ -2.3
CAPRIN1-208ENST00000530008 ATP5EP2Q5VTU8 51 aa0.66□□□□□ -2.3
CAPRIN1-208ENST00000530008 ABCA6Q8N139 1617 aa0.66□□□□□ -2.3
CAPRIN1-208ENST00000530008 NHSQ6T4R5 1651 aa0.65□□□□□ -2.3
CAPRIN1-208ENST00000530008 LMTK2Q8IWU2 1503 aa0.65□□□□□ -2.31
CAPRIN1-208ENST00000530008 LRRC37AA6NMS7 1700 aa0.65□□□□□ -2.31
CAPRIN1-208ENST00000530008 Q5VSD8 79 aa0.65□□□□□ -2.31
CAPRIN1-208ENST00000530008 WFDC9Q8NEX5 89 aa0.65□□□□□ -2.31
CAPRIN1-208ENST00000530008 MROH2AA6NES4 1674 aa0.65□□□□□ -2.31
CAPRIN1-208ENST00000530008 HFM1A2PYH4 1435 aa0.64□□□□□ -2.31
CAPRIN1-208ENST00000530008 NREPQ16612 68 aa0.64□□□□□ -2.31
CAPRIN1-208ENST00000530008 GAFA1Q96PS6 74 aa0.64□□□□□ -2.31
CAPRIN1-208ENST00000530008 U3KQA8 63 aa0.64□□□□□ -2.31
CAPRIN1-208ENST00000530008 F8P00451 2351 aa0.64□□□□□ -2.31
CAPRIN1-208ENST00000530008 ANKRD17O75179 2603 aaKnown RBP0.64□□□□□ -2.31
CAPRIN1-208ENST00000530008 ITSN2Q9NZM3 1697 aa0.63□□□□□ -2.31
CAPRIN1-208ENST00000530008 RALGAPBQ86X10 1494 aa0.63□□□□□ -2.31
CAPRIN1-208ENST00000530008 A0A087WWC5 75 aa0.63□□□□□ -2.31
CAPRIN1-208ENST00000530008 LCE6AA0A183 80 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms