RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 LBHQ53QV2 105 aaPredicted RBP7.79□□□□□ -1.16
CCDC90B-216ENST00000529856 TP73-AS1Q9UF72 201 aa7.79□□□□□ -1.16
CCDC90B-216ENST00000529856 HERC1Q15751 4861 aa7.78□□□□□ -1.16
CCDC90B-216ENST00000529856 IGKCP01834 107 aa7.78□□□□□ -1.16
CCDC90B-216ENST00000529856 SND1-IT1Q9HBX3 110 aa7.78□□□□□ -1.16
CCDC90B-216ENST00000529856 SYS1-DBNDD2H3BUS1 97 aa7.77□□□□□ -1.17
CCDC90B-216ENST00000529856 LEPROTO15243 131 aa7.77□□□□□ -1.17
CCDC90B-216ENST00000529856 IGLV5-37A0A075B6J1 123 aa7.76□□□□□ -1.17
CCDC90B-216ENST00000529856 IGLV7-43P04211 117 aa7.76□□□□□ -1.17
CCDC90B-216ENST00000529856 LINC00158P58513 81 aa7.76□□□□□ -1.17
CCDC90B-216ENST00000529856 HERV-K104P63124 156 aa7.76□□□□□ -1.17
CCDC90B-216ENST00000529856 MRPL55Q7Z7F7 128 aaKnown RBP7.76□□□□□ -1.17
CCDC90B-216ENST00000529856 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
CCDC90B-216ENST00000529856 NDUFA12Q9UI09 145 aa7.76□□□□□ -1.17
CCDC90B-216ENST00000529856 MYMXA0A1B0GTQ4 84 aa7.75□□□□□ -1.17
CCDC90B-216ENST00000529856 HERVK_113P61574 105 aa7.75□□□□□ -1.17
CCDC90B-216ENST00000529856 PET117Q6UWS5 81 aa7.75□□□□□ -1.17
CCDC90B-216ENST00000529856 LINC00167Q96N53 147 aa7.75□□□□□ -1.17
CCDC90B-216ENST00000529856 TSPEAR-AS2P59090 65 aa7.74□□□□□ -1.17
CCDC90B-216ENST00000529856 LINC01545Q5VT33 79 aa7.74□□□□□ -1.17
CCDC90B-216ENST00000529856 A0A0U1RRA0 63 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 LINC00587B1AMM8 73 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 J3QQQ9 107 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 C3orf79P0CE67 100 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 SMIM13P0DJ93 91 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 VPREB1P12018 145 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 RPL24P83731 157 aaKnown RBP7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 MEIG1Q5JSS6 88 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 REG3GQ6UW15 175 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 NKAPP1Q8N9T2 125 aa7.73□□□□□ -1.17
CCDC90B-216ENST00000529856 GAGE10A6NGK3 116 aa7.72□□□□□ -1.17
CCDC90B-216ENST00000529856 RPL37AP8A6NKH3 93 aa7.72□□□□□ -1.17
CCDC90B-216ENST00000529856 LINC01600Q96MT4 127 aa7.72□□□□□ -1.17
CCDC90B-216ENST00000529856 E9PLD3 99 aa7.71□□□□□ -1.18
CCDC90B-216ENST00000529856 LGALS3P17931 250 aaKnown RBP7.71□□□□□ -1.18
CCDC90B-216ENST00000529856 NMUP48645 174 aa7.71□□□□□ -1.18
CCDC90B-216ENST00000529856 Q8NDZ9 215 aa7.71□□□□□ -1.18
CCDC90B-216ENST00000529856 KRTDAPP60985 99 aa7.7□□□□□ -1.18
CCDC90B-216ENST00000529856 MIR7-3HGQ8N6C7 128 aa7.7□□□□□ -1.18
CCDC90B-216ENST00000529856 DIRC1Q969H9 104 aa7.7□□□□□ -1.18
CCDC90B-216ENST00000529856 BCE1O60756 84 aa7.69□□□□□ -1.18
CCDC90B-216ENST00000529856 IGLV1-50A0A075B6I6 118 aa7.68□□□□□ -1.18
CCDC90B-216ENST00000529856 H0Y9J4 135 aa7.68□□□□□ -1.18
CCDC90B-216ENST00000529856 ZNF861PO60384 105 aa7.68□□□□□ -1.18
CCDC90B-216ENST00000529856 IGKV2-28A0A075B6P5 120 aa7.67□□□□□ -1.18
CCDC90B-216ENST00000529856 IGKV2D-28P01615 120 aa7.67□□□□□ -1.18
CCDC90B-216ENST00000529856 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
CCDC90B-216ENST00000529856 LOC107984156A0A0G2JMH3 177 aa7.66□□□□□ -1.18
CCDC90B-216ENST00000529856 ARL17AQ8IVW1 177 aa7.66□□□□□ -1.18
CCDC90B-216ENST00000529856 BOD1L2Q8IYS8 172 aa7.66□□□□□ -1.18
CCDC90B-216ENST00000529856 HIST3H2BBQ8N257 126 aa7.66□□□□□ -1.18
CCDC90B-216ENST00000529856 TNXBP22105 4242 aa7.66□□□□□ -1.18
CCDC90B-216ENST00000529856 A0A0J9YXY3 114 aa7.65□□□□□ -1.18
CCDC90B-216ENST00000529856 C20orf202A1L168 122 aa7.65□□□□□ -1.18
CCDC90B-216ENST00000529856 M0R378 163 aa7.65□□□□□ -1.18
CCDC90B-216ENST00000529856 RPL28P46779 137 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-216ENST00000529856 DAND5Q8N907 189 aa7.65□□□□□ -1.18
CCDC90B-216ENST00000529856 IGKV2D-26A0A0A0MRZ7 120 aa7.64□□□□□ -1.19
CCDC90B-216ENST00000529856 HIST1H2BLQ99880 126 aa7.64□□□□□ -1.19
CCDC90B-216ENST00000529856 TMEM238C9JI98 176 aa7.63□□□□□ -1.19
CCDC90B-216ENST00000529856 S100A6P06703 90 aa7.63□□□□□ -1.19
CCDC90B-216ENST00000529856 S100A2P29034 98 aa7.63□□□□□ -1.19
CCDC90B-216ENST00000529856 KRTAP13-1Q8IUC0 172 aa7.63□□□□□ -1.19
CCDC90B-216ENST00000529856 TMEM126AQ9H061 195 aa7.63□□□□□ -1.19
CCDC90B-216ENST00000529856 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
CCDC90B-216ENST00000529856 AKR1D1P51857 326 aa7.62□□□□□ -1.19
CCDC90B-216ENST00000529856 ADAMTSL4-AS1Q5T5F5 129 aa7.62□□□□□ -1.19
CCDC90B-216ENST00000529856 KRTAP4-8Q9BYQ9 185 aa7.62□□□□□ -1.19
CCDC90B-216ENST00000529856 ZNF815PA8K554 130 aa7.61□□□□□ -1.19
CCDC90B-216ENST00000529856 NCR3O14931 201 aa7.61□□□□□ -1.19
CCDC90B-216ENST00000529856 UBE2AP49459 152 aa7.61□□□□□ -1.19
CCDC90B-216ENST00000529856 ATOH7Q8N100 152 aa7.61□□□□□ -1.19
CCDC90B-216ENST00000529856 TIMM17BO60830 172 aa7.6□□□□□ -1.19
CCDC90B-216ENST00000529856 SNRPEP62304 92 aaKnown RBP7.6□□□□□ -1.19
CCDC90B-216ENST00000529856 ANKRD39Q53RE8 183 aa7.6□□□□□ -1.19
CCDC90B-216ENST00000529856 FAM19A1Q7Z5A9 133 aa7.6□□□□□ -1.19
CCDC90B-216ENST00000529856 LITAFQ99732 161 aa7.6□□□□□ -1.19
CCDC90B-216ENST00000529856 MIEN1Q9BRT3 115 aa7.6□□□□□ -1.19
CCDC90B-216ENST00000529856 TTTY13Q9BZ97 58 aa7.6□□□□□ -1.19
CCDC90B-216ENST00000529856 TRBV10-2A0A0K0K1G8 114 aa7.59□□□□□ -1.19
CCDC90B-216ENST00000529856 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
CCDC90B-216ENST00000529856 NDUFC2O95298 119 aa7.59□□□□□ -1.19
CCDC90B-216ENST00000529856 SOSTDC1Q6X4U4 206 aa7.59□□□□□ -1.19
CCDC90B-216ENST00000529856 PRR26Q8N8Z3 221 aa7.59□□□□□ -1.19
CCDC90B-216ENST00000529856 KCNQ1DNQ9H478 68 aa7.59□□□□□ -1.19
CCDC90B-216ENST00000529856 PRLHP81277 87 aa7.58□□□□□ -1.2
CCDC90B-216ENST00000529856 TRBV10-3A0A0K0K1G6 114 aa7.57□□□□□ -1.2
CCDC90B-216ENST00000529856 C5orf52A6NGY3 159 aa7.57□□□□□ -1.2
CCDC90B-216ENST00000529856 PRYO14603 147 aa7.57□□□□□ -1.2
CCDC90B-216ENST00000529856 NPC2P61916 151 aa7.57□□□□□ -1.2
CCDC90B-216ENST00000529856 SPANXB1Q9NS25 103 aaPredicted RBP7.57□□□□□ -1.2
CCDC90B-216ENST00000529856 SPRR1AP35321 89 aa7.56□□□□□ -1.2
CCDC90B-216ENST00000529856 LINC00308Q8TCZ7 52 aa7.56□□□□□ -1.2
CCDC90B-216ENST00000529856 DDTP30046 118 aa7.55□□□□□ -1.2
CCDC90B-216ENST00000529856 LINC00337Q8N6G1 96 aa7.55□□□□□ -1.2
CCDC90B-216ENST00000529856 HMCN2Q8NDA2 5059 aa7.54□□□□□ -1.2
CCDC90B-216ENST00000529856 KRTAP4-16G5E9R7 235 aaPredicted RBP7.54□□□□□ -1.2
CCDC90B-216ENST00000529856 RPL13AP40429 203 aaKnown RBP7.54□□□□□ -1.2
CCDC90B-216ENST00000529856 S100A12P80511 92 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms