RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 A0A096LNJ9 63 aa5.65□□□□□ -1.5
CMTM1-210ENST00000528441 TINCRA0A1B0GVN0 87 aa5.65□□□□□ -1.5
CMTM1-210ENST00000528441 TSTD3H0UI37 97 aa5.65□□□□□ -1.5
CMTM1-210ENST00000528441 SCGB1D1O95968 90 aa5.65□□□□□ -1.5
CMTM1-210ENST00000528441 TLX1NBP0CAT3 122 aa5.65□□□□□ -1.5
CMTM1-210ENST00000528441 KIAA0087Q14695 138 aa5.65□□□□□ -1.5
CMTM1-210ENST00000528441 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
CMTM1-210ENST00000528441 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.5
CMTM1-210ENST00000528441 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
CMTM1-210ENST00000528441 F8VRH5 84 aa5.64□□□□□ -1.51
CMTM1-210ENST00000528441 ATP5LO75964 103 aa5.64□□□□□ -1.51
CMTM1-210ENST00000528441 LINC01545Q5VT33 79 aa5.64□□□□□ -1.51
CMTM1-210ENST00000528441 CST9LQ9H4G1 147 aa5.64□□□□□ -1.51
CMTM1-210ENST00000528441 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
CMTM1-210ENST00000528441 TMEM170BQ5T4T1 132 aa5.63□□□□□ -1.51
CMTM1-210ENST00000528441 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
CMTM1-210ENST00000528441 HERC1Q15751 4861 aa5.63□□□□□ -1.51
CMTM1-210ENST00000528441 FAT3Q8TDW7 4589 aa5.63□□□□□ -1.51
CMTM1-210ENST00000528441 SMIM1B2RUZ4 78 aa5.62□□□□□ -1.51
CMTM1-210ENST00000528441 KRTDAPP60985 99 aa5.62□□□□□ -1.51
CMTM1-210ENST00000528441 LBHQ53QV2 105 aaPredicted RBP5.62□□□□□ -1.51
CMTM1-210ENST00000528441 FAM19A3Q7Z5A8 133 aa5.62□□□□□ -1.51
CMTM1-210ENST00000528441 H0Y8G0 127 aa5.61□□□□□ -1.51
CMTM1-210ENST00000528441 PFN2P35080 140 aa5.61□□□□□ -1.51
CMTM1-210ENST00000528441 LRP1Q07954 4544 aaKnown RBP5.61□□□□□ -1.51
CMTM1-210ENST00000528441 C9orf129Q5T035 196 aaKnown RBP5.61□□□□□ -1.51
CMTM1-210ENST00000528441 LCE4AQ5TA78 99 aa5.61□□□□□ -1.51
CMTM1-210ENST00000528441 NKAPP1Q8N9T2 125 aa5.61□□□□□ -1.51
CMTM1-210ENST00000528441 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
CMTM1-210ENST00000528441 IFI27L1Q96BM0 104 aa5.61□□□□□ -1.51
CMTM1-210ENST00000528441 VAMP8Q9BV40 100 aa5.61□□□□□ -1.51
CMTM1-210ENST00000528441 TRAV12-1A0A0B4J245 112 aa5.6□□□□□ -1.51
CMTM1-210ENST00000528441 IGLV7-43P04211 117 aa5.6□□□□□ -1.51
CMTM1-210ENST00000528441 DDTP30046 118 aa5.6□□□□□ -1.51
CMTM1-210ENST00000528441 MIEN1Q9BRT3 115 aa5.6□□□□□ -1.51
CMTM1-210ENST00000528441 CHTOPQ9Y3Y2 248 aaKnown RBP5.6□□□□□ -1.51
CMTM1-210ENST00000528441 GAGE10A6NGK3 116 aa5.59□□□□□ -1.51
CMTM1-210ENST00000528441 IGLC3P0DOY3 106 aa5.59□□□□□ -1.51
CMTM1-210ENST00000528441 ZNF625Q96I27 306 aaPredicted RBP5.59□□□□□ -1.51
CMTM1-210ENST00000528441 C22orf24Q9Y442 160 aa5.59□□□□□ -1.51
CMTM1-210ENST00000528441 IGLV5-45A0A087WSX0 123 aa5.58□□□□□ -1.52
CMTM1-210ENST00000528441 ZNF22P17026 224 aaPredicted RBP5.58□□□□□ -1.52
CMTM1-210ENST00000528441 MRPL55Q7Z7F7 128 aaKnown RBP5.58□□□□□ -1.52
CMTM1-210ENST00000528441 LINC01600Q96MT4 127 aa5.58□□□□□ -1.52
CMTM1-210ENST00000528441 LINC00587B1AMM8 73 aa5.57□□□□□ -1.52
CMTM1-210ENST00000528441 DLEU1O43261 78 aa5.57□□□□□ -1.52
CMTM1-210ENST00000528441 PMCHL2Q9BQD1 86 aa5.57□□□□□ -1.52
CMTM1-210ENST00000528441 UQCR10Q9UDW1 63 aa5.57□□□□□ -1.52
CMTM1-210ENST00000528441 A0A0U1RRA0 63 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 C11orf86A6NJI1 115 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 RPL37AP8A6NKH3 93 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 PCP4L1A6NKN8 68 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 HSBP1L1C9JCN9 74 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 H0Y9J4 135 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 MT1HL1P0DM35 61 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 UBE2AP49459 152 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 LINC00158P58513 81 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 SRSF9Q13242 221 aaKnown RBP eCLIP5.56□□□□□ -1.52
CMTM1-210ENST00000528441 ODF1Q14990 250 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 SPATA45Q537H7 98 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 MEIG1Q5JSS6 88 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 ERG28Q9UKR5 140 aa5.56□□□□□ -1.52
CMTM1-210ENST00000528441 SFTA2Q6UW10 78 aa5.55□□□□□ -1.52
CMTM1-210ENST00000528441 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 DPM2O94777 84 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 PLNP26678 52 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 RPL28P46779 137 aaKnown RBP5.54□□□□□ -1.52
CMTM1-210ENST00000528441 RPL24P83731 157 aaKnown RBP5.54□□□□□ -1.52
CMTM1-210ENST00000528441 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 C14orf144Q96I85 54 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 PRO1933Q9H354 126 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 TP73-AS1Q9UF72 201 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 PAM16Q9Y3D7 125 aa5.54□□□□□ -1.52
CMTM1-210ENST00000528441 IGKCP01834 107 aa5.53□□□□□ -1.52
CMTM1-210ENST00000528441 COX8AP10176 69 aa5.53□□□□□ -1.52
CMTM1-210ENST00000528441 CTAG1AP78358 180 aa5.53□□□□□ -1.52
CMTM1-210ENST00000528441 KRTAP7-1Q8IUC3 87 aa5.53□□□□□ -1.52
CMTM1-210ENST00000528441 PRR26Q8N8Z3 221 aa5.53□□□□□ -1.52
CMTM1-210ENST00000528441 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
CMTM1-210ENST00000528441 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
CMTM1-210ENST00000528441 ZNF861PO60384 105 aa5.52□□□□□ -1.53
CMTM1-210ENST00000528441 BCE1O60756 84 aa5.52□□□□□ -1.53
CMTM1-210ENST00000528441 HERVK_113P61574 105 aa5.52□□□□□ -1.53
CMTM1-210ENST00000528441 SLC25A34Q6PIV7 304 aa5.52□□□□□ -1.53
CMTM1-210ENST00000528441 BOD1L2Q8IYS8 172 aa5.52□□□□□ -1.53
CMTM1-210ENST00000528441 TMEM223A0PJW6 202 aa5.51□□□□□ -1.53
CMTM1-210ENST00000528441 M0R143 59 aa5.51□□□□□ -1.53
CMTM1-210ENST00000528441 COX17Q14061 63 aa5.51□□□□□ -1.53
CMTM1-210ENST00000528441 FAM19A1Q7Z5A9 133 aa5.51□□□□□ -1.53
CMTM1-210ENST00000528441 SND1-IT1Q9HBX3 110 aa5.51□□□□□ -1.53
CMTM1-210ENST00000528441 HIGD1BQ9P298 99 aa5.51□□□□□ -1.53
CMTM1-210ENST00000528441 IGLV1-50A0A075B6I6 118 aa5.5□□□□□ -1.53
CMTM1-210ENST00000528441 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
CMTM1-210ENST00000528441 ATOH7Q8N100 152 aa5.5□□□□□ -1.53
CMTM1-210ENST00000528441 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
CMTM1-210ENST00000528441 MYMXA0A1B0GTQ4 84 aa5.49□□□□□ -1.53
CMTM1-210ENST00000528441 SMIM13P0DJ93 91 aa5.49□□□□□ -1.53
CMTM1-210ENST00000528441 LGALS3P17931 250 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms