RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
CAPN1-215ENST00000528396 LRP1Q07954 4544 aaKnown RBP8.21□□□□□ -1.09
CAPN1-215ENST00000528396 A0A0U1RRA0 63 aa8.21□□□□□ -1.1
CAPN1-215ENST00000528396 LINC00587B1AMM8 73 aa8.21□□□□□ -1.1
CAPN1-215ENST00000528396 HERV-K104P63124 156 aa8.21□□□□□ -1.1
CAPN1-215ENST00000528396 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
CAPN1-215ENST00000528396 NDUFA12Q9UI09 145 aa8.21□□□□□ -1.1
CAPN1-215ENST00000528396 PKHD1L1Q86WI1 4243 aa8.2□□□□□ -1.1
CAPN1-215ENST00000528396 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
CAPN1-215ENST00000528396 RPL37AP8A6NKH3 93 aa8.19□□□□□ -1.1
CAPN1-215ENST00000528396 SYS1-DBNDD2H3BUS1 97 aa8.19□□□□□ -1.1
CAPN1-215ENST00000528396 LEPROTO15243 131 aa8.19□□□□□ -1.1
CAPN1-215ENST00000528396 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
CAPN1-215ENST00000528396 LINC00167Q96N53 147 aa8.19□□□□□ -1.1
CAPN1-215ENST00000528396 J3QQQ9 107 aa8.18□□□□□ -1.1
CAPN1-215ENST00000528396 SMIM13P0DJ93 91 aa8.18□□□□□ -1.1
CAPN1-215ENST00000528396 LINC01600Q96MT4 127 aa8.18□□□□□ -1.1
CAPN1-215ENST00000528396 FAT3Q8TDW7 4589 aa8.17□□□□□ -1.1
CAPN1-215ENST00000528396 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
CAPN1-215ENST00000528396 H0Y9J4 135 aa8.16□□□□□ -1.1
CAPN1-215ENST00000528396 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
CAPN1-215ENST00000528396 NMUP48645 174 aa8.16□□□□□ -1.1
CAPN1-215ENST00000528396 PET117Q6UWS5 81 aa8.16□□□□□ -1.1
CAPN1-215ENST00000528396 BCE1O60756 84 aa8.15□□□□□ -1.1
CAPN1-215ENST00000528396 VPREB1P12018 145 aa8.15□□□□□ -1.1
CAPN1-215ENST00000528396 RPL28P46779 137 aaKnown RBP8.15□□□□□ -1.1
CAPN1-215ENST00000528396 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
CAPN1-215ENST00000528396 KRTDAPP60985 99 aa8.15□□□□□ -1.1
CAPN1-215ENST00000528396 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
CAPN1-215ENST00000528396 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
CAPN1-215ENST00000528396 HMCN2Q8NDA2 5059 aa8.14□□□□□ -1.11
CAPN1-215ENST00000528396 C20orf202A1L168 122 aa8.14□□□□□ -1.11
CAPN1-215ENST00000528396 ZNF861PO60384 105 aa8.14□□□□□ -1.11
CAPN1-215ENST00000528396 MT1HL1P0DM35 61 aa8.14□□□□□ -1.11
CAPN1-215ENST00000528396 UBE2AP49459 152 aa8.14□□□□□ -1.11
CAPN1-215ENST00000528396 BOD1L2Q8IYS8 172 aa8.14□□□□□ -1.11
CAPN1-215ENST00000528396 LINC01545Q5VT33 79 aa8.13□□□□□ -1.11
CAPN1-215ENST00000528396 MIEN1Q9BRT3 115 aa8.13□□□□□ -1.11
CAPN1-215ENST00000528396 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
CAPN1-215ENST00000528396 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
CAPN1-215ENST00000528396 E9PLD3 99 aa8.11□□□□□ -1.11
CAPN1-215ENST00000528396 M0R378 163 aa8.11□□□□□ -1.11
CAPN1-215ENST00000528396 S100A2P29034 98 aa8.1□□□□□ -1.11
CAPN1-215ENST00000528396 S100A12P80511 92 aa8.1□□□□□ -1.11
CAPN1-215ENST00000528396 DAND5Q8N907 189 aa8.1□□□□□ -1.11
CAPN1-215ENST00000528396 NCR3O14931 201 aa8.09□□□□□ -1.11
CAPN1-215ENST00000528396 S100A6P06703 90 aa8.09□□□□□ -1.11
CAPN1-215ENST00000528396 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
CAPN1-215ENST00000528396 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
CAPN1-215ENST00000528396 TMEM238C9JI98 176 aa8.08□□□□□ -1.12
CAPN1-215ENST00000528396 AKR1D1P51857 326 aa8.08□□□□□ -1.12
CAPN1-215ENST00000528396 Q8NDZ9 215 aa8.08□□□□□ -1.12
CAPN1-215ENST00000528396 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
CAPN1-215ENST00000528396 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
CAPN1-215ENST00000528396 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
CAPN1-215ENST00000528396 A0A0J9YXY3 114 aa8.06□□□□□ -1.12
CAPN1-215ENST00000528396 RPL13AP40429 203 aaKnown RBP8.06□□□□□ -1.12
CAPN1-215ENST00000528396 PRLHP81277 87 aa8.06□□□□□ -1.12
CAPN1-215ENST00000528396 ZNF815PA8K554 130 aa8.05□□□□□ -1.12
CAPN1-215ENST00000528396 PRYO14603 147 aa8.04□□□□□ -1.12
CAPN1-215ENST00000528396 NPC2P61916 151 aa8.04□□□□□ -1.12
CAPN1-215ENST00000528396 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
CAPN1-215ENST00000528396 S100A7L2Q5SY68 101 aa8.03□□□□□ -1.12
CAPN1-215ENST00000528396 SCGB1D4Q6XE38 83 aa8.03□□□□□ -1.12
CAPN1-215ENST00000528396 ATOH7Q8N100 152 aa8.03□□□□□ -1.12
CAPN1-215ENST00000528396 HIST3H2BBQ8N257 126 aa8.03□□□□□ -1.12
CAPN1-215ENST00000528396 SPANXB1Q9NS25 103 aaPredicted RBP8.03□□□□□ -1.12
CAPN1-215ENST00000528396 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
CAPN1-215ENST00000528396 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
CAPN1-215ENST00000528396 TRBV10-2A0A0K0K1G8 114 aa8.02□□□□□ -1.13
CAPN1-215ENST00000528396 ETDCA0A1B0GVM5 59 aa8.02□□□□□ -1.13
CAPN1-215ENST00000528396 DDTP30046 118 aa8.02□□□□□ -1.13
CAPN1-215ENST00000528396 KRTAP13-1Q8IUC0 172 aa8.02□□□□□ -1.13
CAPN1-215ENST00000528396 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.13
CAPN1-215ENST00000528396 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
CAPN1-215ENST00000528396 TIMM17BO60830 172 aa8.01□□□□□ -1.13
CAPN1-215ENST00000528396 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
CAPN1-215ENST00000528396 HIST1H2BLQ99880 126 aa8.01□□□□□ -1.13
CAPN1-215ENST00000528396 NDUFC2O95298 119 aa8□□□□□ -1.13
CAPN1-215ENST00000528396 CRYGAP11844 174 aa8□□□□□ -1.13
CAPN1-215ENST00000528396 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
CAPN1-215ENST00000528396 HSBP1L1C9JCN9 74 aa7.99□□□□□ -1.13
CAPN1-215ENST00000528396 SNRPEP62304 92 aaKnown RBP7.99□□□□□ -1.13
CAPN1-215ENST00000528396 TTTY13Q9BZ97 58 aa7.99□□□□□ -1.13
CAPN1-215ENST00000528396 TNXBP22105 4242 aa7.98□□□□□ -1.13
CAPN1-215ENST00000528396 ANKRD39Q53RE8 183 aa7.98□□□□□ -1.13
CAPN1-215ENST00000528396 LINC00337Q8N6G1 96 aa7.98□□□□□ -1.13
CAPN1-215ENST00000528396 LINC00308Q8TCZ7 52 aa7.98□□□□□ -1.13
CAPN1-215ENST00000528396 COPS9Q8WXC6 57 aa7.98□□□□□ -1.13
CAPN1-215ENST00000528396 CBY1Q9Y3M2 126 aa7.98□□□□□ -1.13
CAPN1-215ENST00000528396 SOSTDC1Q6X4U4 206 aa7.97□□□□□ -1.13
CAPN1-215ENST00000528396 SPANXCQ9NY87 97 aa7.97□□□□□ -1.13
CAPN1-215ENST00000528396 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
CAPN1-215ENST00000528396 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
CAPN1-215ENST00000528396 OR13C6PQ8NH95 151 aa7.96□□□□□ -1.14
CAPN1-215ENST00000528396 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.14
CAPN1-215ENST00000528396 LITAFQ99732 161 aa7.96□□□□□ -1.14
CAPN1-215ENST00000528396 ANAPC11Q9NYG5 84 aa7.96□□□□□ -1.14
CAPN1-215ENST00000528396 TRAV23DV6A0A075B6W5 121 aa7.95□□□□□ -1.14
CAPN1-215ENST00000528396 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms