RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 C10orf25Q5T742 122 aa5.96□□□□□ -1.46
CHD7-208ENST00000528280 BOD1L2Q8IYS8 172 aa5.96□□□□□ -1.46
CHD7-208ENST00000528280 LINC01600Q96MT4 127 aa5.96□□□□□ -1.46
CHD7-208ENST00000528280 KRTAP9-6A0A140TA67 174 aa5.95□□□□□ -1.46
CHD7-208ENST00000528280 TINCRA0A1B0GVN0 87 aa5.95□□□□□ -1.46
CHD7-208ENST00000528280 CXCL5P42830 114 aa5.95□□□□□ -1.46
CHD7-208ENST00000528280 ODF1Q14990 250 aa5.95□□□□□ -1.46
CHD7-208ENST00000528280 BATFQ16520 125 aa5.95□□□□□ -1.46
CHD7-208ENST00000528280 GAGE2EQ4V326 116 aa5.95□□□□□ -1.46
CHD7-208ENST00000528280 TOMM7Q9P0U1 55 aa5.95□□□□□ -1.46
CHD7-208ENST00000528280 GAGE2DQ9UEU5 116 aa5.95□□□□□ -1.46
CHD7-208ENST00000528280 DPM2O94777 84 aa5.94□□□□□ -1.46
CHD7-208ENST00000528280 PLNP26678 52 aa5.94□□□□□ -1.46
CHD7-208ENST00000528280 PMVKQ15126 192 aa5.94□□□□□ -1.46
CHD7-208ENST00000528280 ZC2HC1BQ5TFG8 222 aa5.94□□□□□ -1.46
CHD7-208ENST00000528280 C2orf82Q6UX34 121 aa5.94□□□□□ -1.46
CHD7-208ENST00000528280 CST9LQ9H4G1 147 aa5.94□□□□□ -1.46
CHD7-208ENST00000528280 HIGD1BQ9P298 99 aa5.94□□□□□ -1.46
CHD7-208ENST00000528280 CDKN2A-AS1Q9UH64 79 aa5.94□□□□□ -1.46
CHD7-208ENST00000528280 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
CHD7-208ENST00000528280 F8VRH5 84 aa5.93□□□□□ -1.46
CHD7-208ENST00000528280 H0Y8G0 127 aa5.93□□□□□ -1.46
CHD7-208ENST00000528280 IGKCP01834 107 aa5.93□□□□□ -1.46
CHD7-208ENST00000528280 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
CHD7-208ENST00000528280 HINT1P49773 126 aaPredicted RBP5.93□□□□□ -1.46
CHD7-208ENST00000528280 HSD52Q0P140 79 aa5.93□□□□□ -1.46
CHD7-208ENST00000528280 C1orf137Q5JT78 98 aa5.93□□□□□ -1.46
CHD7-208ENST00000528280 BVES-AS1Q5T3Y7 98 aa5.93□□□□□ -1.46
CHD7-208ENST00000528280 PHF5AQ7RTV0 110 aaKnown RBP5.93□□□□□ -1.46
CHD7-208ENST00000528280 H3BRM9 83 aa5.92□□□□□ -1.46
CHD7-208ENST00000528280 C2orf91Q6ZV80 131 aa5.92□□□□□ -1.46
CHD7-208ENST00000528280 DIRC1Q969H9 104 aa5.92□□□□□ -1.46
CHD7-208ENST00000528280 IGLV5-45A0A087WSX0 123 aa5.91□□□□□ -1.46
CHD7-208ENST00000528280 A6NDN8 102 aa5.91□□□□□ -1.46
CHD7-208ENST00000528280 UBE2BP63146 152 aa5.91□□□□□ -1.46
CHD7-208ENST00000528280 UBE2V1Q13404 147 aa5.91□□□□□ -1.46
CHD7-208ENST00000528280 FAM19A5Q7Z5A7 132 aaPredicted RBP5.91□□□□□ -1.46
CHD7-208ENST00000528280 FAM168BA1KXE4 195 aa5.9□□□□□ -1.46
CHD7-208ENST00000528280 M0QXV9 152 aa5.9□□□□□ -1.46
CHD7-208ENST00000528280 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
CHD7-208ENST00000528280 KRTAP10-8P60410 259 aa5.9□□□□□ -1.46
CHD7-208ENST00000528280 TAL2Q16559 108 aa5.9□□□□□ -1.46
CHD7-208ENST00000528280 COX7B2Q8TF08 81 aa5.9□□□□□ -1.46
CHD7-208ENST00000528280 SMIM1B2RUZ4 78 aa5.89□□□□□ -1.47
CHD7-208ENST00000528280 C9orf129Q5T035 196 aaKnown RBP5.89□□□□□ -1.47
CHD7-208ENST00000528280 TAX1BP3O14907 124 aa5.88□□□□□ -1.47
CHD7-208ENST00000528280 SFTA2Q6UW10 78 aa5.88□□□□□ -1.47
CHD7-208ENST00000528280 TP73-AS1Q9UF72 201 aa5.88□□□□□ -1.47
CHD7-208ENST00000528280 CHTOPQ9Y3Y2 248 aaKnown RBP5.88□□□□□ -1.47
CHD7-208ENST00000528280 NMUP48645 174 aa5.87□□□□□ -1.47
CHD7-208ENST00000528280 C22orf24Q9Y442 160 aa5.87□□□□□ -1.47
CHD7-208ENST00000528280 H0Y9J4 135 aa5.86□□□□□ -1.47
CHD7-208ENST00000528280 SPINK8P0C7L1 97 aa5.86□□□□□ -1.47
CHD7-208ENST00000528280 HERVK_113P61574 105 aa5.86□□□□□ -1.47
CHD7-208ENST00000528280 KRTAP7-1Q8IUC3 87 aa5.86□□□□□ -1.47
CHD7-208ENST00000528280 XAGE1AQ9HD64 81 aa5.86□□□□□ -1.47
CHD7-208ENST00000528280 E9PLD3 99 aa5.85□□□□□ -1.47
CHD7-208ENST00000528280 PCP4P48539 62 aa5.85□□□□□ -1.47
CHD7-208ENST00000528280 COX17Q14061 63 aa5.85□□□□□ -1.47
CHD7-208ENST00000528280 MRPL55Q7Z7F7 128 aaKnown RBP5.85□□□□□ -1.47
CHD7-208ENST00000528280 PCP2Q8IVA1 136 aa5.85□□□□□ -1.47
CHD7-208ENST00000528280 IGLV5-39A0A0G2JS06 123 aa5.84□□□□□ -1.47
CHD7-208ENST00000528280 C9orf118A6NHY6 69 aa5.84□□□□□ -1.47
CHD7-208ENST00000528280 VAMP3Q15836 100 aa5.84□□□□□ -1.47
CHD7-208ENST00000528280 GTF2H5Q6ZYL4 71 aa5.84□□□□□ -1.47
CHD7-208ENST00000528280 TNXBP22105 4242 aa5.83□□□□□ -1.48
CHD7-208ENST00000528280 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
CHD7-208ENST00000528280 IGKV2D-26A0A0A0MRZ7 120 aa5.83□□□□□ -1.48
CHD7-208ENST00000528280 C11orf86A6NJI1 115 aa5.83□□□□□ -1.48
CHD7-208ENST00000528280 ZNF861PO60384 105 aa5.83□□□□□ -1.48
CHD7-208ENST00000528280 TMEM170BQ5T4T1 132 aa5.83□□□□□ -1.48
CHD7-208ENST00000528280 KRTAP11-1Q8IUC1 163 aa5.83□□□□□ -1.48
CHD7-208ENST00000528280 IGLV5-37A0A075B6J1 123 aa5.82□□□□□ -1.48
CHD7-208ENST00000528280 MYMXA0A1B0GTQ4 84 aa5.82□□□□□ -1.48
CHD7-208ENST00000528280 SMIM13P0DJ93 91 aa5.82□□□□□ -1.48
CHD7-208ENST00000528280 ZNF22P17026 224 aaPredicted RBP5.82□□□□□ -1.48
CHD7-208ENST00000528280 RPL13AP40429 203 aaKnown RBP5.82□□□□□ -1.48
CHD7-208ENST00000528280 RPL28P46779 137 aaKnown RBP5.82□□□□□ -1.48
CHD7-208ENST00000528280 RPL24P83731 157 aaKnown RBP5.82□□□□□ -1.48
CHD7-208ENST00000528280 CEND1Q8N111 149 aa5.82□□□□□ -1.48
CHD7-208ENST00000528280 NKAPP1Q8N9T2 125 aa5.82□□□□□ -1.48
CHD7-208ENST00000528280 TMEM238LA0A1B0GVL6 79 aa5.81□□□□□ -1.48
CHD7-208ENST00000528280 A6NJY4 79 aa5.81□□□□□ -1.48
CHD7-208ENST00000528280 K7ERU9 68 aa5.81□□□□□ -1.48
CHD7-208ENST00000528280 BCE1O60756 84 aa5.81□□□□□ -1.48
CHD7-208ENST00000528280 PFN2P35080 140 aa5.81□□□□□ -1.48
CHD7-208ENST00000528280 LINC00167Q96N53 147 aa5.81□□□□□ -1.48
CHD7-208ENST00000528280 A0A1B0GWB2 263 aa5.8□□□□□ -1.48
CHD7-208ENST00000528280 ERG28Q9UKR5 140 aa5.8□□□□□ -1.48
CHD7-208ENST00000528280 GAGE10A6NGK3 116 aa5.79□□□□□ -1.48
CHD7-208ENST00000528280 K7EP34 96 aa5.79□□□□□ -1.48
CHD7-208ENST00000528280 FABP2P12104 132 aa5.79□□□□□ -1.48
CHD7-208ENST00000528280 PRR26Q8N8Z3 221 aa5.79□□□□□ -1.48
CHD7-208ENST00000528280 SPANXB1Q9NS25 103 aaPredicted RBP5.79□□□□□ -1.48
CHD7-208ENST00000528280 FAT4Q6V0I7 4981 aa5.79□□□□□ -1.48
CHD7-208ENST00000528280 A0A1W2PPM0 123 aa5.78□□□□□ -1.48
CHD7-208ENST00000528280 RPL37AP8A6NKH3 93 aa5.78□□□□□ -1.48
CHD7-208ENST00000528280 ZNF815PA8K554 130 aa5.78□□□□□ -1.48
CHD7-208ENST00000528280 FXYD2P54710 66 aa5.78□□□□□ -1.48
CHD7-208ENST00000528280 PLEKHB2Q96CS7 222 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 314.7 ms