RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 HERV-K104P63124 156 aa7.29□□□□□ -1.24
TRAPPC4-209ENST00000528230 GAGE10A6NGK3 116 aa7.28□□□□□ -1.24
TRAPPC4-209ENST00000528230 LINC00587B1AMM8 73 aa7.28□□□□□ -1.24
TRAPPC4-209ENST00000528230 PLNP26678 52 aa7.28□□□□□ -1.24
TRAPPC4-209ENST00000528230 LINC00158P58513 81 aa7.28□□□□□ -1.24
TRAPPC4-209ENST00000528230 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
TRAPPC4-209ENST00000528230 H0Y8G0 127 aa7.27□□□□□ -1.25
TRAPPC4-209ENST00000528230 FABP4P15090 132 aa7.27□□□□□ -1.25
TRAPPC4-209ENST00000528230 TNXBP22105 4242 aa7.27□□□□□ -1.25
TRAPPC4-209ENST00000528230 MYMXA0A1B0GTQ4 84 aa7.26□□□□□ -1.25
TRAPPC4-209ENST00000528230 NDUFA12Q9UI09 145 aa7.26□□□□□ -1.25
TRAPPC4-209ENST00000528230 LEPROTO15243 131 aa7.25□□□□□ -1.25
TRAPPC4-209ENST00000528230 ATP6V1G1O75348 118 aa7.25□□□□□ -1.25
TRAPPC4-209ENST00000528230 SCO1O75880 301 aa7.25□□□□□ -1.25
TRAPPC4-209ENST00000528230 DPM2O94777 84 aa7.25□□□□□ -1.25
TRAPPC4-209ENST00000528230 RPL13AP40429 203 aaKnown RBP7.25□□□□□ -1.25
TRAPPC4-209ENST00000528230 PLEKHB2Q96CS7 222 aa7.25□□□□□ -1.25
TRAPPC4-209ENST00000528230 MAP1LC3CQ9BXW4 147 aa7.25□□□□□ -1.25
TRAPPC4-209ENST00000528230 IGKV2-28A0A075B6P5 120 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST1H2BKO60814 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 IGKV2D-28P01615 120 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST1H2BJP06899 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 SMIM13P0DJ93 91 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST1H2BOP23527 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST1H2BBP33778 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST1H2BDP58876 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HERVK_113P61574 105 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST1H2BCP62807 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST2H2BEQ16778 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 MEIG1Q5JSS6 88 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 KRTAP13-1Q8IUC0 172 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST1H2BHQ93079 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST1H2BNQ99877 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 HIST1H2BMQ99879 126 aa7.24□□□□□ -1.25
TRAPPC4-209ENST00000528230 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
TRAPPC4-209ENST00000528230 IGKCP01834 107 aa7.23□□□□□ -1.25
TRAPPC4-209ENST00000528230 UBE2AP49459 152 aa7.23□□□□□ -1.25
TRAPPC4-209ENST00000528230 XP32Q5T750 250 aa7.23□□□□□ -1.25
TRAPPC4-209ENST00000528230 Q8NDZ9 215 aa7.23□□□□□ -1.25
TRAPPC4-209ENST00000528230 M0R378 163 aa7.22□□□□□ -1.25
TRAPPC4-209ENST00000528230 NMUP48645 174 aa7.22□□□□□ -1.25
TRAPPC4-209ENST00000528230 MIR7-3HGQ8N6C7 128 aa7.22□□□□□ -1.25
TRAPPC4-209ENST00000528230 TMEM126AQ9H061 195 aa7.22□□□□□ -1.25
TRAPPC4-209ENST00000528230 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
TRAPPC4-209ENST00000528230 J3QQQ9 107 aa7.21□□□□□ -1.26
TRAPPC4-209ENST00000528230 PMCHL2Q9BQD1 86 aa7.21□□□□□ -1.26
TRAPPC4-209ENST00000528230 IGKV2D-26A0A0A0MRZ7 120 aa7.2□□□□□ -1.26
TRAPPC4-209ENST00000528230 LOC107984156A0A0G2JMH3 177 aa7.2□□□□□ -1.26
TRAPPC4-209ENST00000528230 TMEM238C9JI98 176 aa7.2□□□□□ -1.26
TRAPPC4-209ENST00000528230 SYS1-DBNDD2H3BUS1 97 aa7.2□□□□□ -1.26
TRAPPC4-209ENST00000528230 TSPEAR-AS2P59090 65 aa7.2□□□□□ -1.26
TRAPPC4-209ENST00000528230 FAM19A1Q7Z5A9 133 aa7.2□□□□□ -1.26
TRAPPC4-209ENST00000528230 ARL17AQ8IVW1 177 aa7.2□□□□□ -1.26
TRAPPC4-209ENST00000528230 BOD1L2Q8IYS8 172 aa7.2□□□□□ -1.26
TRAPPC4-209ENST00000528230 CRYGAP11844 174 aa7.19□□□□□ -1.26
TRAPPC4-209ENST00000528230 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
TRAPPC4-209ENST00000528230 E9PLD3 99 aa7.18□□□□□ -1.26
TRAPPC4-209ENST00000528230 PRLHP81277 87 aa7.18□□□□□ -1.26
TRAPPC4-209ENST00000528230 COA6Q5JTJ3 125 aaKnown RBP7.18□□□□□ -1.26
TRAPPC4-209ENST00000528230 FAM229BQ4G0N7 80 aa7.17□□□□□ -1.26
TRAPPC4-209ENST00000528230 LINC01545Q5VT33 79 aa7.17□□□□□ -1.26
TRAPPC4-209ENST00000528230 PET117Q6UWS5 81 aa7.17□□□□□ -1.26
TRAPPC4-209ENST00000528230 A0A087X002 238 aa7.16□□□□□ -1.26
TRAPPC4-209ENST00000528230 A6NJY4 79 aa7.16□□□□□ -1.26
TRAPPC4-209ENST00000528230 PRYO14603 147 aa7.16□□□□□ -1.26
TRAPPC4-209ENST00000528230 KCNQ1DNQ9H478 68 aa7.16□□□□□ -1.26
TRAPPC4-209ENST00000528230 TRBV10-2A0A0K0K1G8 114 aa7.15□□□□□ -1.26
TRAPPC4-209ENST00000528230 SPRR1AP35321 89 aa7.15□□□□□ -1.26
TRAPPC4-209ENST00000528230 TYMSOSQ8TAI1 123 aa7.15□□□□□ -1.26
TRAPPC4-209ENST00000528230 A0A0J9YXY3 114 aa7.14□□□□□ -1.27
TRAPPC4-209ENST00000528230 NCR3O14931 201 aa7.14□□□□□ -1.27
TRAPPC4-209ENST00000528230 S100A12P80511 92 aa7.14□□□□□ -1.27
TRAPPC4-209ENST00000528230 LINC00337Q8N6G1 96 aa7.14□□□□□ -1.27
TRAPPC4-209ENST00000528230 DAND5Q8N907 189 aa7.14□□□□□ -1.27
TRAPPC4-209ENST00000528230 MIEN1Q9BRT3 115 aa7.14□□□□□ -1.27
TRAPPC4-209ENST00000528230 NDUFC2O95298 119 aa7.13□□□□□ -1.27
TRAPPC4-209ENST00000528230 C3orf79P0CE67 100 aa7.13□□□□□ -1.27
TRAPPC4-209ENST00000528230 ANAPC11Q9NYG5 84 aa7.13□□□□□ -1.27
TRAPPC4-209ENST00000528230 TRBV10-3A0A0K0K1G6 114 aa7.12□□□□□ -1.27
TRAPPC4-209ENST00000528230 KRTAP4-16G5E9R7 235 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC4-209ENST00000528230 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
TRAPPC4-209ENST00000528230 HIGD2AQ9BW72 106 aa7.12□□□□□ -1.27
TRAPPC4-209ENST00000528230 SPANXB1Q9NS25 103 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC4-209ENST00000528230 ETDCA0A1B0GVM5 59 aa7.1□□□□□ -1.27
TRAPPC4-209ENST00000528230 TIMM17BO60830 172 aa7.1□□□□□ -1.27
TRAPPC4-209ENST00000528230 S100A1P23297 94 aa7.1□□□□□ -1.27
TRAPPC4-209ENST00000528230 DDTP30046 118 aa7.1□□□□□ -1.27
TRAPPC4-209ENST00000528230 CTAG1AP78358 180 aa7.1□□□□□ -1.27
TRAPPC4-209ENST00000528230 ADAMTSL4-AS1Q5T5F5 129 aa7.1□□□□□ -1.27
TRAPPC4-209ENST00000528230 ZNF706Q9Y5V0 76 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC4-209ENST00000528230 KRTDAPP60985 99 aa7.09□□□□□ -1.27
TRAPPC4-209ENST00000528230 SOSTDC1Q6X4U4 206 aa7.09□□□□□ -1.27
TRAPPC4-209ENST00000528230 SPRR4Q96PI1 79 aa7.09□□□□□ -1.27
TRAPPC4-209ENST00000528230 C20orf202A1L168 122 aa7.08□□□□□ -1.28
TRAPPC4-209ENST00000528230 IGLV6-57P01721 117 aa7.08□□□□□ -1.28
TRAPPC4-209ENST00000528230 AKR1D1P51857 326 aa7.08□□□□□ -1.28
TRAPPC4-209ENST00000528230 S100A7L2Q5SY68 101 aa7.08□□□□□ -1.28
TRAPPC4-209ENST00000528230 SMCR5Q8TEV8 140 aa7.08□□□□□ -1.28
TRAPPC4-209ENST00000528230 LITAFQ99732 161 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms