RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 C7orf33Q8WU49 177 aa6.23□□□□□ -1.41
CAPN1-210ENST00000527699 LINC00526Q96FQ7 95 aa6.23□□□□□ -1.41
CAPN1-210ENST00000527699 SPANXA1Q9NS26 97 aa6.23□□□□□ -1.41
CAPN1-210ENST00000527699 LPAP08519 4548 aa6.23□□□□□ -1.41
CAPN1-210ENST00000527699 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.22□□□□□ -1.41
CAPN1-210ENST00000527699 TRAV8-4A0A0B4J246 113 aa6.22□□□□□ -1.41
CAPN1-210ENST00000527699 LOC107984156A0A0G2JMH3 177 aa6.22□□□□□ -1.41
CAPN1-210ENST00000527699 IGKV2-29A2NJV5 120 aaPredicted RBP6.22□□□□□ -1.41
CAPN1-210ENST00000527699 VCYO14598 125 aa6.22□□□□□ -1.41
CAPN1-210ENST00000527699 TSPAN13O95857 204 aa6.22□□□□□ -1.41
CAPN1-210ENST00000527699 LGALS3P17931 250 aaKnown RBP6.22□□□□□ -1.41
CAPN1-210ENST00000527699 PSMB2P49721 201 aa6.22□□□□□ -1.41
CAPN1-210ENST00000527699 ARL17AQ8IVW1 177 aa6.22□□□□□ -1.41
CAPN1-210ENST00000527699 PLAC8Q9NZF1 115 aa6.21□□□□□ -1.42
CAPN1-210ENST00000527699 A0A096LNI7 61 aa6.2□□□□□ -1.42
CAPN1-210ENST00000527699 A0A0B4J2C4 111 aa6.2□□□□□ -1.42
CAPN1-210ENST00000527699 TRBV6-5A0A0K0K1A5 114 aa6.2□□□□□ -1.42
CAPN1-210ENST00000527699 SPINK8P0C7L1 97 aa6.2□□□□□ -1.42
CAPN1-210ENST00000527699 PRR3P79522 188 aaKnown RBP6.2□□□□□ -1.42
CAPN1-210ENST00000527699 GEMIN7Q9H840 131 aaKnown RBP6.2□□□□□ -1.42
CAPN1-210ENST00000527699 PRO1854Q9UHT4 67 aa6.2□□□□□ -1.42
CAPN1-210ENST00000527699 A0A1B0GUV1 79 aa6.19□□□□□ -1.42
CAPN1-210ENST00000527699 LEPROTO15243 131 aa6.19□□□□□ -1.42
CAPN1-210ENST00000527699 SCGB1C2P0DMR2 95 aa6.19□□□□□ -1.42
CAPN1-210ENST00000527699 SVIPQ8NHG7 77 aa6.19□□□□□ -1.42
CAPN1-210ENST00000527699 CHCHD10Q8WYQ3 142 aaPredicted RBP6.19□□□□□ -1.42
CAPN1-210ENST00000527699 PLEKHB2Q96CS7 222 aa6.19□□□□□ -1.42
CAPN1-210ENST00000527699 RPL39LQ96EH5 51 aaKnown RBP6.19□□□□□ -1.42
CAPN1-210ENST00000527699 IGLV4-69A0A075B6H9 119 aa6.18□□□□□ -1.42
CAPN1-210ENST00000527699 SDHAF1A6NFY7 115 aa6.18□□□□□ -1.42
CAPN1-210ENST00000527699 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
CAPN1-210ENST00000527699 ATXN8Q156A1 80 aa6.18□□□□□ -1.42
CAPN1-210ENST00000527699 TMEM170BQ5T4T1 132 aa6.18□□□□□ -1.42
CAPN1-210ENST00000527699 LCE2DQ5TA82 110 aaPredicted RBP6.18□□□□□ -1.42
CAPN1-210ENST00000527699 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
CAPN1-210ENST00000527699 Q6ZUT4 128 aa6.18□□□□□ -1.42
CAPN1-210ENST00000527699 LINC01600Q96MT4 127 aa6.18□□□□□ -1.42
CAPN1-210ENST00000527699 TRBV27A0A0K0K1C4 114 aa6.17□□□□□ -1.42
CAPN1-210ENST00000527699 IGIPA6NJ69 53 aa6.17□□□□□ -1.42
CAPN1-210ENST00000527699 J3QQQ9 107 aa6.17□□□□□ -1.42
CAPN1-210ENST00000527699 XCL1P47992 114 aa6.17□□□□□ -1.42
CAPN1-210ENST00000527699 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
CAPN1-210ENST00000527699 ERG28Q9UKR5 140 aa6.17□□□□□ -1.42
CAPN1-210ENST00000527699 SLC25A20O43772 301 aa6.16□□□□□ -1.42
CAPN1-210ENST00000527699 TCL1BO95988 128 aa6.16□□□□□ -1.42
CAPN1-210ENST00000527699 SPANXDQ9BXN6 97 aa6.16□□□□□ -1.42
CAPN1-210ENST00000527699 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
CAPN1-210ENST00000527699 SNCGO76070 127 aa6.15□□□□□ -1.42
CAPN1-210ENST00000527699 COX6CP09669 75 aa6.15□□□□□ -1.42
CAPN1-210ENST00000527699 CFC1BP0CG36 223 aa6.15□□□□□ -1.42
CAPN1-210ENST00000527699 CFC1P0CG37 223 aa6.15□□□□□ -1.42
CAPN1-210ENST00000527699 SMCPP49901 116 aaPredicted RBP6.15□□□□□ -1.42
CAPN1-210ENST00000527699 Q1RN00 199 aa6.15□□□□□ -1.42
CAPN1-210ENST00000527699 Q6Q795 121 aa6.15□□□□□ -1.42
CAPN1-210ENST00000527699 ANKRD29Q8N6D5 301 aa6.15□□□□□ -1.42
CAPN1-210ENST00000527699 ANAPC13Q9BS18 74 aa6.15□□□□□ -1.42
CAPN1-210ENST00000527699 A0A0J9YXV3 536 aa6.14□□□□□ -1.43
CAPN1-210ENST00000527699 TMEM223A0PJW6 202 aa6.14□□□□□ -1.43
CAPN1-210ENST00000527699 GAGE2BQ13066 116 aa6.14□□□□□ -1.43
CAPN1-210ENST00000527699 GVQW2A0A096LPI5 108 aaPredicted RBP6.13□□□□□ -1.43
CAPN1-210ENST00000527699 H3BT86 120 aa6.13□□□□□ -1.43
CAPN1-210ENST00000527699 I3L3M4 83 aa6.13□□□□□ -1.43
CAPN1-210ENST00000527699 RPL13AP40429 203 aaKnown RBP6.13□□□□□ -1.43
CAPN1-210ENST00000527699 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
CAPN1-210ENST00000527699 REG3GQ6UW15 175 aa6.13□□□□□ -1.43
CAPN1-210ENST00000527699 COPS9Q8WXC6 57 aa6.13□□□□□ -1.43
CAPN1-210ENST00000527699 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
CAPN1-210ENST00000527699 TRBV30A0A0K0K1B3 111 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 TRBV10-2A0A0K0K1G8 114 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 LINC00959A0A1B0GUT2 108 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 A4D1N5 150 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 C9JAW5 83 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 TSHBP01222 138 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 MT-ATP8P03928 68 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 GAGE2EQ4V326 116 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 RNASE13Q5GAN3 156 aaKnown RBP6.12□□□□□ -1.43
CAPN1-210ENST00000527699 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 TMEM101Q96IK0 257 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 SPANXCQ9NY87 97 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 GAGE2DQ9UEU5 116 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 PYGO1Q9Y3Y4 419 aa6.12□□□□□ -1.43
CAPN1-210ENST00000527699 IGHV1-58A0A0C4DH39 117 aa6.11□□□□□ -1.43
CAPN1-210ENST00000527699 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
CAPN1-210ENST00000527699 TIMM21Q9BVV7 248 aa6.11□□□□□ -1.43
CAPN1-210ENST00000527699 FAM240AA0A1B0GVK7 77 aa6.1□□□□□ -1.43
CAPN1-210ENST00000527699 ZNF561-AS1K7EIQ3 104 aa6.1□□□□□ -1.43
CAPN1-210ENST00000527699 TIMM17BO60830 172 aa6.1□□□□□ -1.43
CAPN1-210ENST00000527699 IFITM1P13164 125 aa6.1□□□□□ -1.43
CAPN1-210ENST00000527699 ZNF22P17026 224 aaPredicted RBP6.1□□□□□ -1.43
CAPN1-210ENST00000527699 TSPEAR-AS2P59090 65 aa6.1□□□□□ -1.43
CAPN1-210ENST00000527699 SYCNQ0VAF6 134 aa6.1□□□□□ -1.43
CAPN1-210ENST00000527699 SS18Q15532 418 aa6.1□□□□□ -1.43
CAPN1-210ENST00000527699 Q6ZRP5 223 aa6.1□□□□□ -1.43
CAPN1-210ENST00000527699 AMELXQ99217 191 aa6.1□□□□□ -1.43
CAPN1-210ENST00000527699 OPRPNQ99935 248 aaPredicted RBP6.1□□□□□ -1.43
CAPN1-210ENST00000527699 RPL39P62891 51 aaKnown RBP6.09□□□□□ -1.43
CAPN1-210ENST00000527699 SFTA2Q6UW10 78 aa6.09□□□□□ -1.43
CAPN1-210ENST00000527699 PHF5AQ7RTV0 110 aaKnown RBP6.09□□□□□ -1.43
CAPN1-210ENST00000527699 MUSTN1Q8IVN3 82 aa6.09□□□□□ -1.43
CAPN1-210ENST00000527699 IGLV4-3A0A075B6K6 122 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms