RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 SND1-IT1Q9HBX3 110 aa14.51□□□□□ -0.09
LRRK1-206ENST00000527698 RPL24P83731 157 aaKnown RBP14.49□□□□□ -0.09
LRRK1-206ENST00000527698 SMIM13P0DJ93 91 aa14.48□□□□□ -0.09
LRRK1-206ENST00000527698 IGLV5-37A0A075B6J1 123 aa14.47□□□□□ -0.09
LRRK1-206ENST00000527698 J3QL48 77 aa14.47□□□□□ -0.09
LRRK1-206ENST00000527698 PHF5AQ7RTV0 110 aaKnown RBP14.47□□□□□ -0.09
LRRK1-206ENST00000527698 C22orf24Q9Y442 160 aa14.47□□□□□ -0.09
LRRK1-206ENST00000527698 KRTAP10-4P60372 401 aaPredicted RBP14.46□□□□□ -0.09
LRRK1-206ENST00000527698 KRTAP7-1Q8IUC3 87 aa14.46□□□□□ -0.09
LRRK1-206ENST00000527698 NKAPP1Q8N9T2 125 aa14.46□□□□□ -0.09
LRRK1-206ENST00000527698 SERTAD4-AS1Q5TG53 156 aa14.45□□□□□ -0.1
LRRK1-206ENST00000527698 MRPL55Q7Z7F7 128 aaKnown RBP14.45□□□□□ -0.1
LRRK1-206ENST00000527698 HSBP1L1C9JCN9 74 aa14.44□□□□□ -0.1
LRRK1-206ENST00000527698 UBE2BP63146 152 aa14.44□□□□□ -0.1
LRRK1-206ENST00000527698 PRR3P79522 188 aaKnown RBP14.44□□□□□ -0.1
LRRK1-206ENST00000527698 A0A0U1RRA0 63 aa14.43□□□□□ -0.1
LRRK1-206ENST00000527698 MIR7-3HGQ8N6C7 128 aa14.43□□□□□ -0.1
LRRK1-206ENST00000527698 ATOH7Q8N100 152 aa14.42□□□□□ -0.1
LRRK1-206ENST00000527698 A0A0J9YXY3 114 aa14.41□□□□□ -0.1
LRRK1-206ENST00000527698 SCGB1D1O95968 90 aa14.41□□□□□ -0.1
LRRK1-206ENST00000527698 IGKV2D-26A0A0A0MRZ7 120 aa14.4□□□□□ -0.1
LRRK1-206ENST00000527698 LOC107984156A0A0G2JMH3 177 aa14.4□□□□□ -0.1
LRRK1-206ENST00000527698 ZNF815PA8K554 130 aa14.4□□□□□ -0.1
LRRK1-206ENST00000527698 KRTAP29-1A8MX34 341 aaPredicted RBP14.4□□□□□ -0.1
LRRK1-206ENST00000527698 TIMM17BO60830 172 aa14.4□□□□□ -0.1
LRRK1-206ENST00000527698 ARL17AQ8IVW1 177 aa14.4□□□□□ -0.1
LRRK1-206ENST00000527698 PSORS1C2Q9UIG4 136 aa14.4□□□□□ -0.1
LRRK1-206ENST00000527698 VPREB1P12018 145 aa14.38□□□□□ -0.11
LRRK1-206ENST00000527698 MIEN1Q9BRT3 115 aa14.38□□□□□ -0.11
LRRK1-206ENST00000527698 ANKRD39Q53RE8 183 aa14.36□□□□□ -0.11
LRRK1-206ENST00000527698 LINC00167Q96N53 147 aa14.36□□□□□ -0.11
LRRK1-206ENST00000527698 C1orf137Q5JT78 98 aa14.35□□□□□ -0.11
LRRK1-206ENST00000527698 BOD1L2Q8IYS8 172 aa14.35□□□□□ -0.11
LRRK1-206ENST00000527698 SCGB1D4Q6XE38 83 aa14.34□□□□□ -0.11
LRRK1-206ENST00000527698 M0R378 163 aa14.33□□□□□ -0.12
LRRK1-206ENST00000527698 SPINK6Q6UWN8 80 aa14.33□□□□□ -0.12
LRRK1-206ENST00000527698 COPS9Q8WXC6 57 aa14.33□□□□□ -0.12
LRRK1-206ENST00000527698 TMEM238C9JI98 176 aa14.31□□□□□ -0.12
LRRK1-206ENST00000527698 DAND5Q8N907 189 aa14.31□□□□□ -0.12
LRRK1-206ENST00000527698 TMA7Q9Y2S6 64 aaKnown RBP14.31□□□□□ -0.12
LRRK1-206ENST00000527698 NDUFC2O95298 119 aa14.3□□□□□ -0.12
LRRK1-206ENST00000527698 IGLV1-50A0A075B6I6 118 aa14.29□□□□□ -0.12
LRRK1-206ENST00000527698 IGLV7-43P04211 117 aa14.29□□□□□ -0.12
LRRK1-206ENST00000527698 ADAMTSL4-AS1Q5T5F5 129 aa14.29□□□□□ -0.12
LRRK1-206ENST00000527698 Q6ZVH6 145 aa14.29□□□□□ -0.12
LRRK1-206ENST00000527698 TTTY13Q9BZ97 58 aa14.29□□□□□ -0.12
LRRK1-206ENST00000527698 TRBV10-2A0A0K0K1G8 114 aa14.28□□□□□ -0.12
LRRK1-206ENST00000527698 GAGE10A6NGK3 116 aa14.28□□□□□ -0.12
LRRK1-206ENST00000527698 RPL37AP8A6NKH3 93 aa14.28□□□□□ -0.12
LRRK1-206ENST00000527698 SRSF9Q13242 221 aaKnown RBP eCLIP14.28□□□□□ -0.12
LRRK1-206ENST00000527698 JOSD1Q15040 202 aaPredicted RBP14.28□□□□□ -0.12
LRRK1-206ENST00000527698 KRTAP11-1Q8IUC1 163 aa14.28□□□□□ -0.12
LRRK1-206ENST00000527698 LITAFQ99732 161 aa14.28□□□□□ -0.12
LRRK1-206ENST00000527698 S100A12P80511 92 aa14.27□□□□□ -0.13
LRRK1-206ENST00000527698 PCP2Q8IVA1 136 aa14.27□□□□□ -0.13
LRRK1-206ENST00000527698 LRP1Q07954 4544 aaKnown RBP14.27□□□□□ -0.13
LRRK1-206ENST00000527698 HMCN2Q8NDA2 5059 aa14.26□□□□□ -0.13
LRRK1-206ENST00000527698 Q8NDZ9 215 aa14.25□□□□□ -0.13
LRRK1-206ENST00000527698 SPANXDQ9BXN6 97 aa14.25□□□□□ -0.13
LRRK1-206ENST00000527698 PPDPFQ9H3Y8 114 aa14.25□□□□□ -0.13
LRRK1-206ENST00000527698 SPANXB1Q9NS25 103 aaPredicted RBP14.25□□□□□ -0.13
LRRK1-206ENST00000527698 SPANXCQ9NY87 97 aa14.25□□□□□ -0.13
LRRK1-206ENST00000527698 BCE1O60756 84 aa14.24□□□□□ -0.13
LRRK1-206ENST00000527698 OXTP01178 125 aa14.24□□□□□ -0.13
LRRK1-206ENST00000527698 HNRNPA3P51991 378 aaKnown RBP14.24□□□□□ -0.13
LRRK1-206ENST00000527698 LINC00308Q8TCZ7 52 aa14.24□□□□□ -0.13
LRRK1-206ENST00000527698 IGKV2-28A0A075B6P5 120 aa14.23□□□□□ -0.13
LRRK1-206ENST00000527698 IGKV2D-28P01615 120 aa14.23□□□□□ -0.13
LRRK1-206ENST00000527698 IFITM1P13164 125 aa14.23□□□□□ -0.13
LRRK1-206ENST00000527698 DIRC1Q969H9 104 aa14.23□□□□□ -0.13
LRRK1-206ENST00000527698 FAT3Q8TDW7 4589 aa14.22□□□□□ -0.13
LRRK1-206ENST00000527698 REG3GQ6UW15 175 aa14.22□□□□□ -0.13
LRRK1-206ENST00000527698 CBY1Q9Y3M2 126 aa14.22□□□□□ -0.13
LRRK1-206ENST00000527698 NCR3O14931 201 aa14.2□□□□□ -0.14
LRRK1-206ENST00000527698 ZNF861PO60384 105 aa14.2□□□□□ -0.14
LRRK1-206ENST00000527698 RPL28P46779 137 aaKnown RBP14.2□□□□□ -0.14
LRRK1-206ENST00000527698 VAMP8Q9BV40 100 aa14.2□□□□□ -0.14
LRRK1-206ENST00000527698 LINC00518Q8N0U6 118 aa14.19□□□□□ -0.14
LRRK1-206ENST00000527698 PRYO14603 147 aa14.18□□□□□ -0.14
LRRK1-206ENST00000527698 DLEU1O43261 78 aa14.18□□□□□ -0.14
LRRK1-206ENST00000527698 NPC2P61916 151 aa14.18□□□□□ -0.14
LRRK1-206ENST00000527698 SOSTDC1Q6X4U4 206 aa14.18□□□□□ -0.14
LRRK1-206ENST00000527698 TMEM126AQ9H061 195 aa14.18□□□□□ -0.14
LRRK1-206ENST00000527698 KCNQ1DNQ9H478 68 aa14.18□□□□□ -0.14
LRRK1-206ENST00000527698 COX8AP10176 69 aa14.17□□□□□ -0.14
LRRK1-206ENST00000527698 S100A7L2Q5SY68 101 aa14.17□□□□□ -0.14
LRRK1-206ENST00000527698 DDTP30046 118 aa14.15□□□□□ -0.14
LRRK1-206ENST00000527698 PKHD1L1Q86WI1 4243 aa14.14□□□□□ -0.15
LRRK1-206ENST00000527698 TRBV10-3A0A0K0K1G6 114 aa14.14□□□□□ -0.15
LRRK1-206ENST00000527698 H0Y9J4 135 aa14.14□□□□□ -0.15
LRRK1-206ENST00000527698 UBE2AP49459 152 aa14.14□□□□□ -0.15
LRRK1-206ENST00000527698 SPATA45Q537H7 98 aa14.14□□□□□ -0.15
LRRK1-206ENST00000527698 PAM16Q9Y3D7 125 aa14.14□□□□□ -0.15
LRRK1-206ENST00000527698 UBR4Q5T4S7 5183 aa14.14□□□□□ -0.15
LRRK1-206ENST00000527698 EIF4EBP3O60516 100 aaPredicted RBP14.13□□□□□ -0.15
LRRK1-206ENST00000527698 IGLV6-57P01721 117 aa14.12□□□□□ -0.15
LRRK1-206ENST00000527698 PYY3Q5JQD4 70 aa14.11□□□□□ -0.15
LRRK1-206ENST00000527698 FAM19A1Q7Z5A9 133 aa14.11□□□□□ -0.15
LRRK1-206ENST00000527698 LINC00337Q8N6G1 96 aa14.11□□□□□ -0.15
LRRK1-206ENST00000527698 SPRR1AP35321 89 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms