RNA–Protein interactions for RNA: ENST00000527254.5

MS4A6A-207, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-207ENST00000527254 IGHV3-64A0A075B6Q5 118 aa3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 MAP1LC3B2A6NCE7 125 aa3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 CNBPP62633 177 aaKnown RBP3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 MRPL54Q6P161 138 aaKnown RBP3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 ORMDL3Q8N138 153 aa3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 LINC01600Q96MT4 127 aa3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 MAP1LC3BQ9GZQ8 125 aa3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 ZNF706Q9Y5V0 76 aaPredicted RBP3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 ARL2-SNX15V9GYD0 113 aa3.71□□□□□ -1.82
MS4A6A-207ENST00000527254 H3BVH4 76 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 HLA-DQA1P01909 254 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 ATP6V0CP27449 155 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 CRIP1P50238 77 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 PMCHL1Q16048 86 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 RNASE13Q5GAN3 156 aaKnown RBP3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 ATP5L2Q7Z4Y8 100 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 LINC00269Q8N2A0 174 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 FER1L6-AS1Q8NA97 138 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 OR5A1Q8NGJ0 315 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 SND1-IT1Q9HBX3 110 aa3.7□□□□□ -1.82
MS4A6A-207ENST00000527254 TRBV6-1A0A0K0K1D8 114 aa3.69□□□□□ -1.82
MS4A6A-207ENST00000527254 GRIFINA4D1Z8 144 aa3.69□□□□□ -1.82
MS4A6A-207ENST00000527254 M0R381 172 aa3.69□□□□□ -1.82
MS4A6A-207ENST00000527254 APCSP02743 223 aa3.69□□□□□ -1.82
MS4A6A-207ENST00000527254 IGLC3P0DOY3 106 aa3.69□□□□□ -1.82
MS4A6A-207ENST00000527254 GNG4P50150 75 aa3.69□□□□□ -1.82
MS4A6A-207ENST00000527254 KRTAP26-1Q6PEX3 210 aa3.69□□□□□ -1.82
MS4A6A-207ENST00000527254 SPANXCQ9NY87 97 aa3.69□□□□□ -1.82
MS4A6A-207ENST00000527254 PLAC8Q9NZF1 115 aa3.69□□□□□ -1.82
MS4A6A-207ENST00000527254 TRBV25-1A0A075B6N4 114 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 A8MWL6 223 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 PANO1I0J062 215 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 SH2D1AO60880 128 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 SRP19P09132 144 aaKnown RBP3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 TLX1NBP0CAT3 122 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 UBE2G1P62253 170 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 NTM-AS1Q6ZSK4 140 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 Q86TA4 180 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 SMIM20Q8N5G0 67 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 OR13C6PQ8NH95 151 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 DERL1Q9BUN8 251 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 PKIGQ9Y2B9 76 aa3.68□□□□□ -1.82
MS4A6A-207ENST00000527254 PKHD1L1Q86WI1 4243 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 TRAV9-1A0A075B6T8 112 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 TRAV1-1A0A0B4J248 108 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 IGHV1-24A0A0C4DH33 117 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 ZNF727A8MUV8 499 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 FGF6P10767 208 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 KRTAP10-8P60410 259 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 HSD52Q0P140 79 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 ADIRFQ15847 76 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 ZNF56Q15929 161 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 SPATA45Q537H7 98 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 RPL7L1Q6DKI1 246 aaKnown RBP3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 SPINK6Q6UWN8 80 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 SPACA4Q8TDM5 124 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 AP1S3Q96PC3 154 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 LINC00474Q9P2X8 69 aa3.67□□□□□ -1.82
MS4A6A-207ENST00000527254 TMSB15BA0A087X1C1 80 aa3.66□□□□□ -1.82
MS4A6A-207ENST00000527254 CTXND1A0A1B0GTU2 59 aa3.66□□□□□ -1.82
MS4A6A-207ENST00000527254 LTAP01374 205 aa3.66□□□□□ -1.82
MS4A6A-207ENST00000527254 HERVK_113P63121 156 aa3.66□□□□□ -1.82
MS4A6A-207ENST00000527254 SEC11AP67812 179 aa3.66□□□□□ -1.82
MS4A6A-207ENST00000527254 LRP2P98164 4655 aa3.66□□□□□ -1.82
MS4A6A-207ENST00000527254 SPANXN1Q5VSR9 72 aa3.66□□□□□ -1.82
MS4A6A-207ENST00000527254 PMCHL2Q9BQD1 86 aa3.66□□□□□ -1.82
MS4A6A-207ENST00000527254 IGLV10-54A0A075B6I4 117 aa3.65□□□□□ -1.83
MS4A6A-207ENST00000527254 TAX1BP3O14907 124 aa3.65□□□□□ -1.83
MS4A6A-207ENST00000527254 HINT1P49773 126 aaPredicted RBP3.65□□□□□ -1.83
MS4A6A-207ENST00000527254 AMMECR1LQ6DCA0 310 aa3.65□□□□□ -1.83
MS4A6A-207ENST00000527254 CLPSL2Q6UWE3 100 aa3.65□□□□□ -1.83
MS4A6A-207ENST00000527254 HSPB8Q9UJY1 196 aa3.65□□□□□ -1.83
MS4A6A-207ENST00000527254 ERG28Q9UKR5 140 aa3.65□□□□□ -1.83
MS4A6A-207ENST00000527254 KIF25-AS1Q9Y6Z4 181 aa3.65□□□□□ -1.83
MS4A6A-207ENST00000527254 FAM236DA0A1B0GTK5 79 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 K7EP34 96 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 M0QY20 66 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 APOMO95445 188 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 FAM236CP0DP71 79 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 COX6A2Q02221 97 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 OR10AG1Q8NH19 301 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 TMEM126AQ9H061 195 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 ST20Q9HBF5 79 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 CYSLTR1Q9Y271 337 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 TRAPPC1Q9Y5R8 145 aa3.64□□□□□ -1.83
MS4A6A-207ENST00000527254 IGLV4-60A0A075B6I1 120 aa3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 TRAV26-2A0A0B4J265 109 aa3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 TMEM223A0PJW6 202 aa3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 UBE2L6O14933 153 aa3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 LINC00313P59037 77 aa3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 MEF2BQ02080 365 aaPredicted RBP3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 BAGE2Q86Y30 109 aa3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 KRTAP7-1Q8IUC3 87 aa3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 FAM213BQ8TBF2 198 aa3.63□□□□□ -1.83
MS4A6A-207ENST00000527254 TNXBP22105 4242 aa3.62□□□□□ -1.83
MS4A6A-207ENST00000527254 F2Z2F3 143 aa3.62□□□□□ -1.83
MS4A6A-207ENST00000527254 H3BRM9 83 aa3.62□□□□□ -1.83
MS4A6A-207ENST00000527254 MT-ND6P03923 174 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms