RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 CST9LQ9H4G1 147 aa9.43□□□□□ -0.9
PTPRU-210ENST00000527027 HERVK_113P63121 156 aa9.42□□□□□ -0.9
PTPRU-210ENST00000527027 F8VRH5 84 aa9.41□□□□□ -0.9
PTPRU-210ENST00000527027 GEMIN7Q9H840 131 aaKnown RBP9.41□□□□□ -0.9
PTPRU-210ENST00000527027 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
PTPRU-210ENST00000527027 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
PTPRU-210ENST00000527027 PET117Q6UWS5 81 aa9.4□□□□□ -0.9
PTPRU-210ENST00000527027 LINC00167Q96N53 147 aa9.4□□□□□ -0.9
PTPRU-210ENST00000527027 TMA7Q9Y2S6 64 aaKnown RBP9.4□□□□□ -0.9
PTPRU-210ENST00000527027 CHTOPQ9Y3Y2 248 aaKnown RBP9.4□□□□□ -0.9
PTPRU-210ENST00000527027 KRTAP9-6A0A140TA67 174 aa9.39□□□□□ -0.91
PTPRU-210ENST00000527027 C20orf202A1L168 122 aa9.39□□□□□ -0.91
PTPRU-210ENST00000527027 RPL37AP8A6NKH3 93 aa9.39□□□□□ -0.91
PTPRU-210ENST00000527027 HIST1H2BLQ99880 126 aa9.39□□□□□ -0.91
PTPRU-210ENST00000527027 CDKN2A-AS1Q9UH64 79 aa9.39□□□□□ -0.91
PTPRU-210ENST00000527027 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
PTPRU-210ENST00000527027 KRTAP13-2Q52LG2 175 aa9.38□□□□□ -0.91
PTPRU-210ENST00000527027 RETNLBQ9BQ08 111 aa9.38□□□□□ -0.91
PTPRU-210ENST00000527027 H3BRM9 83 aa9.37□□□□□ -0.91
PTPRU-210ENST00000527027 IGLC3P0DOY3 106 aa9.37□□□□□ -0.91
PTPRU-210ENST00000527027 PLNP26678 52 aa9.37□□□□□ -0.91
PTPRU-210ENST00000527027 CXCL5P42830 114 aa9.37□□□□□ -0.91
PTPRU-210ENST00000527027 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
PTPRU-210ENST00000527027 GAGE10A6NGK3 116 aa9.36□□□□□ -0.91
PTPRU-210ENST00000527027 H0Y8G0 127 aa9.36□□□□□ -0.91
PTPRU-210ENST00000527027 KRTDAPP60985 99 aa9.36□□□□□ -0.91
PTPRU-210ENST00000527027 FAM229BQ4G0N7 80 aa9.36□□□□□ -0.91
PTPRU-210ENST00000527027 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
PTPRU-210ENST00000527027 TPRXLQ17RH7 258 aa9.35□□□□□ -0.91
PTPRU-210ENST00000527027 KRTAP13-1Q8IUC0 172 aa9.35□□□□□ -0.91
PTPRU-210ENST00000527027 LINC00304Q8N9R0 145 aa9.35□□□□□ -0.91
PTPRU-210ENST00000527027 MUC17Q685J3 4493 aa9.35□□□□□ -0.91
PTPRU-210ENST00000527027 IGLV5-45A0A087WSX0 123 aa9.34□□□□□ -0.91
PTPRU-210ENST00000527027 DPM2O94777 84 aa9.34□□□□□ -0.91
PTPRU-210ENST00000527027 UBE2AP49459 152 aa9.34□□□□□ -0.91
PTPRU-210ENST00000527027 IGLV5-37A0A075B6J1 123 aa9.33□□□□□ -0.92
PTPRU-210ENST00000527027 LINC01545Q5VT33 79 aa9.33□□□□□ -0.92
PTPRU-210ENST00000527027 IGLV7-46A0A075B6I9 117 aa9.32□□□□□ -0.92
PTPRU-210ENST00000527027 IGKCP01834 107 aa9.32□□□□□ -0.92
PTPRU-210ENST00000527027 CTAG1AP78358 180 aa9.32□□□□□ -0.92
PTPRU-210ENST00000527027 IGKV2D-26A0A0A0MRZ7 120 aa9.31□□□□□ -0.92
PTPRU-210ENST00000527027 C11orf86A6NJI1 115 aa9.31□□□□□ -0.92
PTPRU-210ENST00000527027 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
PTPRU-210ENST00000527027 HERVK_113P61574 105 aa9.31□□□□□ -0.92
PTPRU-210ENST00000527027 TMEM170BQ5T4T1 132 aa9.31□□□□□ -0.92
PTPRU-210ENST00000527027 NKAPP1Q8N9T2 125 aa9.31□□□□□ -0.92
PTPRU-210ENST00000527027 COX7B2Q8TF08 81 aa9.31□□□□□ -0.92
PTPRU-210ENST00000527027 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
PTPRU-210ENST00000527027 IGKV2-28A0A075B6P5 120 aa9.27□□□□□ -0.93
PTPRU-210ENST00000527027 IGKV2D-28P01615 120 aa9.27□□□□□ -0.93
PTPRU-210ENST00000527027 SFTA2Q6UW10 78 aa9.27□□□□□ -0.93
PTPRU-210ENST00000527027 TMEM223A0PJW6 202 aa9.26□□□□□ -0.93
PTPRU-210ENST00000527027 SCGB1D1O95968 90 aa9.26□□□□□ -0.93
PTPRU-210ENST00000527027 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
PTPRU-210ENST00000527027 HSBP1L1C9JCN9 74 aa9.25□□□□□ -0.93
PTPRU-210ENST00000527027 PRLHP81277 87 aa9.25□□□□□ -0.93
PTPRU-210ENST00000527027 PMCHL2Q9BQD1 86 aa9.25□□□□□ -0.93
PTPRU-210ENST00000527027 SPINK8P0C7L1 97 aa9.24□□□□□ -0.93
PTPRU-210ENST00000527027 JOSD1Q15040 202 aaPredicted RBP9.24□□□□□ -0.93
PTPRU-210ENST00000527027 PLEKHB2Q96CS7 222 aa9.24□□□□□ -0.93
PTPRU-210ENST00000527027 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
PTPRU-210ENST00000527027 FAM19A1Q7Z5A9 133 aa9.23□□□□□ -0.93
PTPRU-210ENST00000527027 TMEM126AQ9H061 195 aa9.22□□□□□ -0.93
PTPRU-210ENST00000527027 TMEM238C9JI98 176 aa9.21□□□□□ -0.94
PTPRU-210ENST00000527027 E9PLD3 99 aa9.21□□□□□ -0.94
PTPRU-210ENST00000527027 LEPROTO15243 131 aa9.21□□□□□ -0.94
PTPRU-210ENST00000527027 SPAG11AQ6PDA7 123 aa9.21□□□□□ -0.94
PTPRU-210ENST00000527027 VPREB1P12018 145 aa9.2□□□□□ -0.94
PTPRU-210ENST00000527027 PFN2P35080 140 aa9.2□□□□□ -0.94
PTPRU-210ENST00000527027 NMUP48645 174 aa9.2□□□□□ -0.94
PTPRU-210ENST00000527027 C3orf22Q8N5N4 141 aa9.2□□□□□ -0.94
PTPRU-210ENST00000527027 LINC00587B1AMM8 73 aa9.19□□□□□ -0.94
PTPRU-210ENST00000527027 M0R378 163 aa9.19□□□□□ -0.94
PTPRU-210ENST00000527027 LGALS3P17931 250 aaKnown RBP9.19□□□□□ -0.94
PTPRU-210ENST00000527027 HERV-K104P63124 156 aa9.18□□□□□ -0.94
PTPRU-210ENST00000527027 RPL24P83731 157 aaKnown RBP9.18□□□□□ -0.94
PTPRU-210ENST00000527027 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
PTPRU-210ENST00000527027 SND1-IT1Q9HBX3 110 aa9.18□□□□□ -0.94
PTPRU-210ENST00000527027 MYMXA0A1B0GTQ4 84 aa9.17□□□□□ -0.94
PTPRU-210ENST00000527027 J3QQQ9 107 aa9.17□□□□□ -0.94
PTPRU-210ENST00000527027 ATOH7Q8N100 152 aa9.17□□□□□ -0.94
PTPRU-210ENST00000527027 LINC00337Q8N6G1 96 aa9.16□□□□□ -0.94
PTPRU-210ENST00000527027 COX17Q14061 63 aa9.15□□□□□ -0.94
PTPRU-210ENST00000527027 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.94
PTPRU-210ENST00000527027 VAMP8Q9BV40 100 aa9.15□□□□□ -0.94
PTPRU-210ENST00000527027 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
PTPRU-210ENST00000527027 NDUFA12Q9UI09 145 aa9.15□□□□□ -0.94
PTPRU-210ENST00000527027 ERG28Q9UKR5 140 aa9.15□□□□□ -0.94
PTPRU-210ENST00000527027 S100A12P80511 92 aa9.14□□□□□ -0.95
PTPRU-210ENST00000527027 PYY3Q5JQD4 70 aa9.14□□□□□ -0.95
PTPRU-210ENST00000527027 LINC01547P58512 204 aaPredicted RBP9.13□□□□□ -0.95
PTPRU-210ENST00000527027 ASB16-AS1Q495Z4 193 aa9.13□□□□□ -0.95
PTPRU-210ENST00000527027 SPRR4Q96PI1 79 aa9.13□□□□□ -0.95
PTPRU-210ENST00000527027 SMIM6P0DI80 62 aa9.12□□□□□ -0.95
PTPRU-210ENST00000527027 KRTAP13-3Q3SY46 172 aa9.12□□□□□ -0.95
PTPRU-210ENST00000527027 Q8NDZ9 215 aa9.12□□□□□ -0.95
PTPRU-210ENST00000527027 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
PTPRU-210ENST00000527027 LOC105371267A0A1B0GV96 52 aa9.11□□□□□ -0.95
PTPRU-210ENST00000527027 ANKRD39Q53RE8 183 aa9.11□□□□□ -0.95
PTPRU-210ENST00000527027 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms