RNA–Protein interactions for RNA: ENST00000526772.5

CTNND1-214, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-214ENST00000526772 C22orf24Q9Y442 160 aa4.44□□□□□ -1.7
CTNND1-214ENST00000526772 GVQW2A0A096LPI5 108 aaPredicted RBP4.44□□□□□ -1.7
CTNND1-214ENST00000526772 A6NN06 94 aa4.44□□□□□ -1.7
CTNND1-214ENST00000526772 ODF3L2Q3SX64 289 aa4.44□□□□□ -1.7
CTNND1-214ENST00000526772 DSCAMO60469 2012 aa4.44□□□□□ -1.7
CTNND1-214ENST00000526772 A0A087X002 238 aa4.44□□□□□ -1.7
CTNND1-214ENST00000526772 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
CTNND1-214ENST00000526772 PLA2G1BP04054 148 aaKnown RBP4.44□□□□□ -1.7
CTNND1-214ENST00000526772 ROS1P08922 2347 aa4.43□□□□□ -1.7
CTNND1-214ENST00000526772 FAM229AH3BQW9 127 aa4.43□□□□□ -1.7
CTNND1-214ENST00000526772 DEFB113Q30KQ7 82 aa4.43□□□□□ -1.7
CTNND1-214ENST00000526772 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
CTNND1-214ENST00000526772 X6R8D5 127 aa4.42□□□□□ -1.7
CTNND1-214ENST00000526772 PRO3102Q9H379 93 aa4.42□□□□□ -1.7
CTNND1-214ENST00000526772 ST20-AS1Q8NBB2 130 aa4.42□□□□□ -1.7
CTNND1-214ENST00000526772 CREBBPQ92793 2442 aa4.42□□□□□ -1.7
CTNND1-214ENST00000526772 ABCA4P78363 2273 aa4.42□□□□□ -1.7
CTNND1-214ENST00000526772 IGKV2D-30A0A075B6S6 120 aa4.41□□□□□ -1.7
CTNND1-214ENST00000526772 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
CTNND1-214ENST00000526772 APC2O95996 2303 aa4.41□□□□□ -1.7
CTNND1-214ENST00000526772 Q6ZRX8 168 aa4.41□□□□□ -1.7
CTNND1-214ENST00000526772 MAPK1IP1LQ8NDC0 245 aa4.41□□□□□ -1.7
CTNND1-214ENST00000526772 CUL9Q8IWT3 2517 aa4.4□□□□□ -1.7
CTNND1-214ENST00000526772 C7orf33Q8WU49 177 aa4.4□□□□□ -1.71
CTNND1-214ENST00000526772 MED13LQ71F56 2210 aa4.4□□□□□ -1.71
CTNND1-214ENST00000526772 TLX1NBP0CAT3 122 aa4.4□□□□□ -1.71
CTNND1-214ENST00000526772 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
CTNND1-214ENST00000526772 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
CTNND1-214ENST00000526772 C10orf99Q6UWK7 81 aa4.39□□□□□ -1.71
CTNND1-214ENST00000526772 CEP290O15078 2479 aa4.39□□□□□ -1.71
CTNND1-214ENST00000526772 DEFB4AO15263 64 aa4.38□□□□□ -1.71
CTNND1-214ENST00000526772 C9orf163Q8N9P6 203 aa4.38□□□□□ -1.71
CTNND1-214ENST00000526772 IGLV1-51P01701 117 aa4.37□□□□□ -1.71
CTNND1-214ENST00000526772 RPL37AP61513 92 aaKnown RBP4.37□□□□□ -1.71
CTNND1-214ENST00000526772 SPTBN2O15020 2390 aa4.37□□□□□ -1.71
CTNND1-214ENST00000526772 Q8NAQ8 132 aa4.37□□□□□ -1.71
CTNND1-214ENST00000526772 LINC00528Q8N1L1 170 aa4.37□□□□□ -1.71
CTNND1-214ENST00000526772 SPINK7P58062 85 aa4.36□□□□□ -1.71
CTNND1-214ENST00000526772 FAM104AQ969W3 186 aa4.36□□□□□ -1.71
CTNND1-214ENST00000526772 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.36□□□□□ -1.719e-7■■■□□ 18
CTNND1-214ENST00000526772 COL6A6A6NMZ7 2263 aa4.36□□□□□ -1.71
CTNND1-214ENST00000526772 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
CTNND1-214ENST00000526772 NUPR2A6NF83 97 aa4.35□□□□□ -1.71
CTNND1-214ENST00000526772 SPTA1P02549 2419 aa4.35□□□□□ -1.71
CTNND1-214ENST00000526772 NOTCH3Q9UM47 2321 aa4.35□□□□□ -1.71
CTNND1-214ENST00000526772 CACNA1GO43497 2377 aa4.34□□□□□ -1.71
CTNND1-214ENST00000526772 IGLV7-43P04211 117 aa4.34□□□□□ -1.71
CTNND1-214ENST00000526772 C18orf65Q6ZTR6 163 aa4.33□□□□□ -1.72
CTNND1-214ENST00000526772 H3BNG1 76 aa4.33□□□□□ -1.72
CTNND1-214ENST00000526772 ZNF575Q86XF7 245 aa4.33□□□□□ -1.72
CTNND1-214ENST00000526772 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
CTNND1-214ENST00000526772 ZDBF2Q9HCK1 2354 aa4.32□□□□□ -1.72
CTNND1-214ENST00000526772 CACNA1HO95180 2353 aa4.32□□□□□ -1.72
CTNND1-214ENST00000526772 SRCAPQ6ZRS2 3230 aa4.32□□□□□ -1.72
CTNND1-214ENST00000526772 SPTAN1Q13813 2472 aaKnown RBP4.32□□□□□ -1.72
CTNND1-214ENST00000526772 APLNQ9ULZ1 77 aa4.32□□□□□ -1.72
CTNND1-214ENST00000526772 IGLV5-48A0A075B6I7 105 aa4.31□□□□□ -1.72
CTNND1-214ENST00000526772 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
CTNND1-214ENST00000526772 M0R2N4 97 aa4.3□□□□□ -1.72
CTNND1-214ENST00000526772 PCSK5Q92824 1860 aa4.3□□□□□ -1.72
CTNND1-214ENST00000526772 IGFL1Q6UW32 110 aa4.3□□□□□ -1.72
CTNND1-214ENST00000526772 Q8N377 158 aa4.3□□□□□ -1.72
CTNND1-214ENST00000526772 PTPRZ1P23471 2315 aaPredicted RBP4.3□□□□□ -1.72
CTNND1-214ENST00000526772 INAFM1C9JVW0 142 aa4.3□□□□□ -1.72
CTNND1-214ENST00000526772 PLA2G2DQ9UNK4 145 aa4.3□□□□□ -1.72
CTNND1-214ENST00000526772 LINC01556Q5JQF7 62 aa4.29□□□□□ -1.72
CTNND1-214ENST00000526772 COL27A1Q8IZC6 1860 aaPredicted RBP4.29□□□□□ -1.72
CTNND1-214ENST00000526772 A0A1W2PNM2 257 aa4.29□□□□□ -1.72
CTNND1-214ENST00000526772 ROMO1P60602 79 aa4.28□□□□□ -1.72
CTNND1-214ENST00000526772 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
CTNND1-214ENST00000526772 TECTAO75443 2155 aa4.28□□□□□ -1.72
CTNND1-214ENST00000526772 A0A1B0GU33 70 aa4.28□□□□□ -1.72
CTNND1-214ENST00000526772 CSNK1G2-AS1Q8NCQ2 148 aa4.28□□□□□ -1.72
CTNND1-214ENST00000526772 DSCR10P59022 87 aa4.27□□□□□ -1.73
CTNND1-214ENST00000526772 SPRR4Q96PI1 79 aa4.27□□□□□ -1.73
CTNND1-214ENST00000526772 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
CTNND1-214ENST00000526772 HRES1P13985 223 aa4.27□□□□□ -1.73
CTNND1-214ENST00000526772 ANKHD1Q8IWZ3 2542 aaKnown RBP4.27□□□□□ -1.73
CTNND1-214ENST00000526772 C15orf56Q8N910 161 aa4.26□□□□□ -1.73
CTNND1-214ENST00000526772 IGLV1-50A0A075B6I6 118 aa4.26□□□□□ -1.73
CTNND1-214ENST00000526772 PCNX1Q96RV3 2341 aa4.25□□□□□ -1.73
CTNND1-214ENST00000526772 PRR34Q9NV39 138 aa4.24□□□□□ -1.73
CTNND1-214ENST00000526772 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
CTNND1-214ENST00000526772 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
CTNND1-214ENST00000526772 MUC4Q99102 2169 aa4.23□□□□□ -1.73
CTNND1-214ENST00000526772 LINC00612Q8N6U2 182 aa4.23□□□□□ -1.73
CTNND1-214ENST00000526772 CNOT1A5YKK6 2376 aaKnown RBP4.23□□□□□ -1.73
CTNND1-214ENST00000526772 ACACAQ13085 2346 aa4.23□□□□□ -1.73
CTNND1-214ENST00000526772 PTPRQQ9UMZ3 2332 aa4.23□□□□□ -1.73
CTNND1-214ENST00000526772 LY6G6CO95867 125 aa4.23□□□□□ -1.73
CTNND1-214ENST00000526772 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
CTNND1-214ENST00000526772 A0A096LNT2 108 aa4.22□□□□□ -1.73
CTNND1-214ENST00000526772 C19orf73Q9NVV2 129 aa4.22□□□□□ -1.73
CTNND1-214ENST00000526772 WNK1Q9H4A3 2382 aa4.22□□□□□ -1.73
CTNND1-214ENST00000526772 LINC00483Q53H64 154 aa4.21□□□□□ -1.73
CTNND1-214ENST00000526772 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
CTNND1-214ENST00000526772 A0A1W2PPR1 153 aa4.19□□□□□ -1.74
CTNND1-214ENST00000526772 C2CD3Q4AC94 2353 aa4.19□□□□□ -1.74
CTNND1-214ENST00000526772 GPR179Q6PRD1 2367 aa4.18□□□□□ -1.74
CTNND1-214ENST00000526772 DNAH10OSP0CZ25 163 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms