RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 M0R378 163 aa7.05□□□□□ -1.28
SSBP3-210ENST00000525990 NDUFA5Q16718 116 aa7.05□□□□□ -1.28
SSBP3-210ENST00000525990 FAM19A1Q7Z5A9 133 aa7.05□□□□□ -1.28
SSBP3-210ENST00000525990 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
SSBP3-210ENST00000525990 IFI27L1Q96BM0 104 aa7.05□□□□□ -1.28
SSBP3-210ENST00000525990 COX17Q14061 63 aa7.04□□□□□ -1.28
SSBP3-210ENST00000525990 LINC00158P58513 81 aa7.03□□□□□ -1.28
SSBP3-210ENST00000525990 LINC00310P59036 64 aa7.03□□□□□ -1.28
SSBP3-210ENST00000525990 CHCHD1Q96BP2 118 aaKnown RBP7.03□□□□□ -1.28
SSBP3-210ENST00000525990 RETNLBQ9BQ08 111 aa7.03□□□□□ -1.28
SSBP3-210ENST00000525990 TRAV12-1A0A0B4J245 112 aa7.02□□□□□ -1.29
SSBP3-210ENST00000525990 SMIM13P0DJ93 91 aa7.02□□□□□ -1.29
SSBP3-210ENST00000525990 RPL24P83731 157 aaKnown RBP7.02□□□□□ -1.29
SSBP3-210ENST00000525990 H0Y8G0 127 aa7.01□□□□□ -1.29
SSBP3-210ENST00000525990 C3orf22Q8N5N4 141 aa7.01□□□□□ -1.29
SSBP3-210ENST00000525990 NCR3O14931 201 aa7□□□□□ -1.29
SSBP3-210ENST00000525990 TRGC2P03986 189 aa7□□□□□ -1.29
SSBP3-210ENST00000525990 TSPEAR-AS2P59090 65 aa7□□□□□ -1.29
SSBP3-210ENST00000525990 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
SSBP3-210ENST00000525990 PLEKHB2Q96CS7 222 aa7□□□□□ -1.29
SSBP3-210ENST00000525990 HSBP1O75506 76 aa6.99□□□□□ -1.29
SSBP3-210ENST00000525990 SFTA2Q6UW10 78 aa6.99□□□□□ -1.29
SSBP3-210ENST00000525990 MIR7-3HGQ8N6C7 128 aa6.99□□□□□ -1.29
SSBP3-210ENST00000525990 LINC00304Q8N9R0 145 aa6.99□□□□□ -1.29
SSBP3-210ENST00000525990 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
SSBP3-210ENST00000525990 MEIG1Q5JSS6 88 aa6.98□□□□□ -1.29
SSBP3-210ENST00000525990 BOD1L2Q8IYS8 172 aa6.98□□□□□ -1.29
SSBP3-210ENST00000525990 IGKV2D-26A0A0A0MRZ7 120 aa6.97□□□□□ -1.29
SSBP3-210ENST00000525990 SERF1AO75920 110 aa6.97□□□□□ -1.29
SSBP3-210ENST00000525990 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
SSBP3-210ENST00000525990 NDUFA12Q9UI09 145 aa6.97□□□□□ -1.29
SSBP3-210ENST00000525990 SLC7A5P1Q8MH63 180 aa6.96□□□□□ -1.3
SSBP3-210ENST00000525990 DAND5Q8N907 189 aa6.96□□□□□ -1.3
SSBP3-210ENST00000525990 MUC2Q02817 5179 aa6.95□□□□□ -1.3
SSBP3-210ENST00000525990 SPRR4Q96PI1 79 aa6.95□□□□□ -1.3
SSBP3-210ENST00000525990 TRBV10-3A0A0K0K1G6 114 aa6.94□□□□□ -1.3
SSBP3-210ENST00000525990 ATP6V1G1O75348 118 aa6.94□□□□□ -1.3
SSBP3-210ENST00000525990 LEPROTL1O95214 131 aa6.94□□□□□ -1.3
SSBP3-210ENST00000525990 FABP4P15090 132 aa6.94□□□□□ -1.3
SSBP3-210ENST00000525990 KRTAP4-16G5E9R7 235 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-210ENST00000525990 PRYO14603 147 aa6.93□□□□□ -1.3
SSBP3-210ENST00000525990 SPRR1AP35321 89 aa6.93□□□□□ -1.3
SSBP3-210ENST00000525990 HERV-K104P63124 156 aa6.93□□□□□ -1.3
SSBP3-210ENST00000525990 MYMXA0A1B0GTQ4 84 aa6.92□□□□□ -1.3
SSBP3-210ENST00000525990 PPDPFQ9H3Y8 114 aa6.92□□□□□ -1.3
SSBP3-210ENST00000525990 KCNQ1DNQ9H478 68 aa6.92□□□□□ -1.3
SSBP3-210ENST00000525990 COLCA2A8K830 154 aa6.91□□□□□ -1.3
SSBP3-210ENST00000525990 LEPROTO15243 131 aa6.91□□□□□ -1.3
SSBP3-210ENST00000525990 SMCR5Q8TEV8 140 aa6.91□□□□□ -1.3
SSBP3-210ENST00000525990 J3QQQ9 107 aa6.9□□□□□ -1.3
SSBP3-210ENST00000525990 EIF4EBP3O60516 100 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-210ENST00000525990 LINC00337Q8N6G1 96 aa6.9□□□□□ -1.3
SSBP3-210ENST00000525990 ETDCA0A1B0GVM5 59 aa6.89□□□□□ -1.31
SSBP3-210ENST00000525990 ERC2-IT1O76042 136 aa6.89□□□□□ -1.31
SSBP3-210ENST00000525990 DPM2O94777 84 aa6.89□□□□□ -1.31
SSBP3-210ENST00000525990 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
SSBP3-210ENST00000525990 PLNP26678 52 aa6.88□□□□□ -1.31
SSBP3-210ENST00000525990 NPC2P61916 151 aa6.88□□□□□ -1.31
SSBP3-210ENST00000525990 SOSTDC1Q6X4U4 206 aa6.88□□□□□ -1.31
SSBP3-210ENST00000525990 Q8NBF4 154 aa6.88□□□□□ -1.31
SSBP3-210ENST00000525990 MAP1LC3CQ9BXW4 147 aa6.88□□□□□ -1.31
SSBP3-210ENST00000525990 HSPB8Q9UJY1 196 aa6.88□□□□□ -1.31
SSBP3-210ENST00000525990 LOC107984156A0A0G2JMH3 177 aa6.87□□□□□ -1.31
SSBP3-210ENST00000525990 B5MCH6 92 aa6.87□□□□□ -1.31
SSBP3-210ENST00000525990 IGKCP01834 107 aa6.87□□□□□ -1.31
SSBP3-210ENST00000525990 DDTP30046 118 aa6.87□□□□□ -1.31
SSBP3-210ENST00000525990 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
SSBP3-210ENST00000525990 ARL17AQ8IVW1 177 aa6.87□□□□□ -1.31
SSBP3-210ENST00000525990 Q9BRP9 147 aa6.87□□□□□ -1.31
SSBP3-210ENST00000525990 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
SSBP3-210ENST00000525990 ADAMTSL4-AS1Q5T5F5 129 aa6.86□□□□□ -1.31
SSBP3-210ENST00000525990 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
SSBP3-210ENST00000525990 ZNF706Q9Y5V0 76 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-210ENST00000525990 LGALS3P17931 250 aaKnown RBP6.85□□□□□ -1.31
SSBP3-210ENST00000525990 HERVK_113P61574 105 aa6.85□□□□□ -1.31
SSBP3-210ENST00000525990 GAGE2AQ6NT46 116 aa6.85□□□□□ -1.31
SSBP3-210ENST00000525990 A0A0J9YXY3 114 aa6.84□□□□□ -1.31
SSBP3-210ENST00000525990 TRBV10-2A0A0K0K1G8 114 aa6.84□□□□□ -1.31
SSBP3-210ENST00000525990 LINC00483Q53H64 154 aa6.84□□□□□ -1.31
SSBP3-210ENST00000525990 SPANXB1Q9NS25 103 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-210ENST00000525990 IGLV9-49A0A0B4J1Y8 123 aa6.83□□□□□ -1.32
SSBP3-210ENST00000525990 IGLV6-57P01721 117 aa6.83□□□□□ -1.32
SSBP3-210ENST00000525990 NMUP48645 174 aa6.83□□□□□ -1.32
SSBP3-210ENST00000525990 MOBPQ13875 183 aa6.83□□□□□ -1.32
SSBP3-210ENST00000525990 Q6ZRX8 168 aa6.83□□□□□ -1.32
SSBP3-210ENST00000525990 MIEN1Q9BRT3 115 aa6.83□□□□□ -1.32
SSBP3-210ENST00000525990 E9PLD3 99 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST1H2BKO60814 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST1H2BJP06899 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST1H2BOP23527 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST1H2BBP33778 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST1H2BDP58876 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST1H2BCP62807 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST2H2BEQ16778 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.82□□□□□ -1.32
SSBP3-210ENST00000525990 SPAG11AQ6PDA7 123 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST1H2BHQ93079 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST1H2BNQ99877 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 HIST1H2BMQ99879 126 aa6.82□□□□□ -1.32
SSBP3-210ENST00000525990 MUC17Q685J3 4493 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms