RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 NDUFA12Q9UI09 145 aa12.1□□□□□ -0.47
EXOSC4-202ENST00000525936 IGLV7-43P04211 117 aa12.09□□□□□ -0.47
EXOSC4-202ENST00000525936 PLEKHB2Q96CS7 222 aa12.09□□□□□ -0.47
EXOSC4-202ENST00000525936 MYMXA0A1B0GTQ4 84 aa12.07□□□□□ -0.48
EXOSC4-202ENST00000525936 J3QQQ9 107 aa12.07□□□□□ -0.48
EXOSC4-202ENST00000525936 C3orf79P0CE67 100 aa12.07□□□□□ -0.48
EXOSC4-202ENST00000525936 LINC00158P58513 81 aa12.07□□□□□ -0.48
EXOSC4-202ENST00000525936 HERVK_113P61574 105 aa12.07□□□□□ -0.48
EXOSC4-202ENST00000525936 LINC00167Q96N53 147 aa12.07□□□□□ -0.48
EXOSC4-202ENST00000525936 MT1HL1P0DM35 61 aa12.06□□□□□ -0.48
EXOSC4-202ENST00000525936 VPREB1P12018 145 aa12.06□□□□□ -0.48
EXOSC4-202ENST00000525936 TNXBP22105 4242 aa12.05□□□□□ -0.48
EXOSC4-202ENST00000525936 LINC00587B1AMM8 73 aa12.05□□□□□ -0.48
EXOSC4-202ENST00000525936 SMIM13P0DJ93 91 aa12.05□□□□□ -0.48
EXOSC4-202ENST00000525936 Q8NDZ9 215 aa12.05□□□□□ -0.48
EXOSC4-202ENST00000525936 E9PLD3 99 aa12.04□□□□□ -0.48
EXOSC4-202ENST00000525936 NMUP48645 174 aa12.04□□□□□ -0.48
EXOSC4-202ENST00000525936 LINC01600Q96MT4 127 aa12.04□□□□□ -0.48
EXOSC4-202ENST00000525936 A0A0U1RRA0 63 aa12.03□□□□□ -0.48
EXOSC4-202ENST00000525936 NKAPP1Q8N9T2 125 aa12.03□□□□□ -0.48
EXOSC4-202ENST00000525936 RPL24P83731 157 aaKnown RBP12.02□□□□□ -0.49
EXOSC4-202ENST00000525936 RPL37AP8A6NKH3 93 aa12.01□□□□□ -0.49
EXOSC4-202ENST00000525936 MEIG1Q5JSS6 88 aa12.01□□□□□ -0.49
EXOSC4-202ENST00000525936 REG3GQ6UW15 175 aa12.01□□□□□ -0.49
EXOSC4-202ENST00000525936 MIR7-3HGQ8N6C7 128 aa12.01□□□□□ -0.49
EXOSC4-202ENST00000525936 GAGE10A6NGK3 116 aa12□□□□□ -0.49
EXOSC4-202ENST00000525936 LGALS3P17931 250 aaKnown RBP12□□□□□ -0.49
EXOSC4-202ENST00000525936 KRTDAPP60985 99 aa12□□□□□ -0.49
EXOSC4-202ENST00000525936 DIRC1Q969H9 104 aa11.99□□□□□ -0.49
EXOSC4-202ENST00000525936 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
EXOSC4-202ENST00000525936 LOC107984156A0A0G2JMH3 177 aa11.98□□□□□ -0.49
EXOSC4-202ENST00000525936 ARL17AQ8IVW1 177 aa11.98□□□□□ -0.49
EXOSC4-202ENST00000525936 HIST3H2BBQ8N257 126 aa11.98□□□□□ -0.49
EXOSC4-202ENST00000525936 H0Y9J4 135 aa11.97□□□□□ -0.49
EXOSC4-202ENST00000525936 ZNF861PO60384 105 aa11.97□□□□□ -0.49
EXOSC4-202ENST00000525936 BCE1O60756 84 aa11.97□□□□□ -0.49
EXOSC4-202ENST00000525936 KRTAP10-8P60410 259 aa11.97□□□□□ -0.49
EXOSC4-202ENST00000525936 HIST1H2BLQ99880 126 aa11.95□□□□□ -0.5
EXOSC4-202ENST00000525936 IGKV2-28A0A075B6P5 120 aa11.94□□□□□ -0.5
EXOSC4-202ENST00000525936 IGKV2D-26A0A0A0MRZ7 120 aa11.94□□□□□ -0.5
EXOSC4-202ENST00000525936 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
EXOSC4-202ENST00000525936 IGKV2D-28P01615 120 aa11.94□□□□□ -0.5
EXOSC4-202ENST00000525936 BOD1L2Q8IYS8 172 aa11.94□□□□□ -0.5
EXOSC4-202ENST00000525936 M0R378 163 aa11.93□□□□□ -0.5
EXOSC4-202ENST00000525936 KRTAP13-1Q8IUC0 172 aa11.93□□□□□ -0.5
EXOSC4-202ENST00000525936 DAND5Q8N907 189 aa11.93□□□□□ -0.5
EXOSC4-202ENST00000525936 C20orf202A1L168 122 aa11.92□□□□□ -0.5
EXOSC4-202ENST00000525936 ADAMTSL4-AS1Q5T5F5 129 aa11.92□□□□□ -0.5
EXOSC4-202ENST00000525936 KRTAP1-4P0C5Y4 121 aa11.91□□□□□ -0.5
EXOSC4-202ENST00000525936 S100A6P06703 90 aa11.9□□□□□ -0.5
EXOSC4-202ENST00000525936 RPL28P46779 137 aaKnown RBP11.9□□□□□ -0.5
EXOSC4-202ENST00000525936 AKR1D1P51857 326 aa11.9□□□□□ -0.5
EXOSC4-202ENST00000525936 TMEM238C9JI98 176 aa11.89□□□□□ -0.51
EXOSC4-202ENST00000525936 S100A2P29034 98 aa11.89□□□□□ -0.51
EXOSC4-202ENST00000525936 LITAFQ99732 161 aa11.89□□□□□ -0.51
EXOSC4-202ENST00000525936 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
EXOSC4-202ENST00000525936 C5orf52A6NGY3 159 aa11.87□□□□□ -0.51
EXOSC4-202ENST00000525936 EIF4EBP3O60516 100 aaPredicted RBP11.87□□□□□ -0.51
EXOSC4-202ENST00000525936 TIMM17BO60830 172 aa11.87□□□□□ -0.51
EXOSC4-202ENST00000525936 SNRPEP62304 92 aaKnown RBP11.87□□□□□ -0.51
EXOSC4-202ENST00000525936 ANKRD39Q53RE8 183 aa11.87□□□□□ -0.51
EXOSC4-202ENST00000525936 TTTY13Q9BZ97 58 aa11.87□□□□□ -0.51
EXOSC4-202ENST00000525936 SOSTDC1Q6X4U4 206 aa11.86□□□□□ -0.51
EXOSC4-202ENST00000525936 ATOH7Q8N100 152 aa11.86□□□□□ -0.51
EXOSC4-202ENST00000525936 TRBV10-2A0A0K0K1G8 114 aa11.85□□□□□ -0.51
EXOSC4-202ENST00000525936 ZNF815PA8K554 130 aa11.85□□□□□ -0.51
EXOSC4-202ENST00000525936 NDUFC2O95298 119 aa11.85□□□□□ -0.51
EXOSC4-202ENST00000525936 NCR3O14931 201 aa11.84□□□□□ -0.51
EXOSC4-202ENST00000525936 KCNQ1DNQ9H478 68 aa11.84□□□□□ -0.51
EXOSC4-202ENST00000525936 HMCN2Q8NDA2 5059 aa11.83□□□□□ -0.52
EXOSC4-202ENST00000525936 SPRR1AP35321 89 aa11.82□□□□□ -0.52
EXOSC4-202ENST00000525936 UBE2AP49459 152 aa11.82□□□□□ -0.52
EXOSC4-202ENST00000525936 PRR26Q8N8Z3 221 aa11.82□□□□□ -0.52
EXOSC4-202ENST00000525936 MIEN1Q9BRT3 115 aa11.82□□□□□ -0.52
EXOSC4-202ENST00000525936 TRBV10-3A0A0K0K1G6 114 aa11.81□□□□□ -0.52
EXOSC4-202ENST00000525936 PRYO14603 147 aa11.81□□□□□ -0.52
EXOSC4-202ENST00000525936 FAM19A1Q7Z5A9 133 aa11.81□□□□□ -0.52
EXOSC4-202ENST00000525936 SPANXB1Q9NS25 103 aaPredicted RBP11.81□□□□□ -0.52
EXOSC4-202ENST00000525936 KRTAP4-16G5E9R7 235 aaPredicted RBP11.8□□□□□ -0.52
EXOSC4-202ENST00000525936 PRLHP81277 87 aa11.8□□□□□ -0.52
EXOSC4-202ENST00000525936 LINC00308Q8TCZ7 52 aa11.8□□□□□ -0.52
EXOSC4-202ENST00000525936 PCP2Q8IVA1 136 aa11.79□□□□□ -0.52
EXOSC4-202ENST00000525936 IGLV6-57P01721 117 aa11.78□□□□□ -0.52
EXOSC4-202ENST00000525936 NPC2P61916 151 aa11.78□□□□□ -0.52
EXOSC4-202ENST00000525936 LINC00337Q8N6G1 96 aa11.78□□□□□ -0.52
EXOSC4-202ENST00000525936 DDTP30046 118 aa11.76□□□□□ -0.53
EXOSC4-202ENST00000525936 SPANXDQ9BXN6 97 aa11.75□□□□□ -0.53
EXOSC4-202ENST00000525936 SPANXCQ9NY87 97 aa11.75□□□□□ -0.53
EXOSC4-202ENST00000525936 SCGB1D4Q6XE38 83 aa11.74□□□□□ -0.53
EXOSC4-202ENST00000525936 RPL13AP40429 203 aaKnown RBP11.73□□□□□ -0.53
EXOSC4-202ENST00000525936 PPDPFQ9H3Y8 114 aa11.73□□□□□ -0.53
EXOSC4-202ENST00000525936 A0A087X002 238 aa11.72□□□□□ -0.53
EXOSC4-202ENST00000525936 S100A12P80511 92 aa11.71□□□□□ -0.53
EXOSC4-202ENST00000525936 S100A7L2Q5SY68 101 aa11.71□□□□□ -0.53
EXOSC4-202ENST00000525936 SCGB1D1O95968 90 aa11.7□□□□□ -0.54
EXOSC4-202ENST00000525936 FAM229BQ4G0N7 80 aa11.7□□□□□ -0.54
EXOSC4-202ENST00000525936 Q6ZVH6 145 aa11.7□□□□□ -0.54
EXOSC4-202ENST00000525936 ANAPC11Q9NYG5 84 aa11.7□□□□□ -0.54
EXOSC4-202ENST00000525936 B5MCH6 92 aa11.69□□□□□ -0.54
EXOSC4-202ENST00000525936 HSBP1L1C9JCN9 74 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms