RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 COMMD7Q86VX2 200 aa3.4□□□□□ -1.87
CTNND1-211ENST00000525821 LINC00337Q8N6G1 96 aa3.4□□□□□ -1.87
CTNND1-211ENST00000525821 TRBV6-5A0A0K0K1A5 114 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 LINC00862A6NCI5 91 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 COX7A2LO14548 114 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 ATP5LO75964 103 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 APCSP02743 223 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 FCER1GP30273 86 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 HBBP68871 147 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 SPAG11BQ08648 103 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 SS18Q15532 418 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 MRPL51Q4U2R6 128 aaKnown RBP3.39□□□□□ -1.87
CTNND1-211ENST00000525821 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 C5orf38Q86SI9 138 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 TMEM101Q96IK0 257 aa3.39□□□□□ -1.87
CTNND1-211ENST00000525821 S100A6P06703 90 aa3.38□□□□□ -1.87
CTNND1-211ENST00000525821 POLR2KP53803 58 aaKnown RBP3.38□□□□□ -1.87
CTNND1-211ENST00000525821 RNASE13Q5GAN3 156 aaKnown RBP3.38□□□□□ -1.87
CTNND1-211ENST00000525821 TMEM136Q6ZRR5 245 aa3.38□□□□□ -1.87
CTNND1-211ENST00000525821 ATP5L2Q7Z4Y8 100 aa3.38□□□□□ -1.87
CTNND1-211ENST00000525821 BTF3L4Q96K17 158 aa3.38□□□□□ -1.87
CTNND1-211ENST00000525821 C20orf78Q9BR46 151 aa3.38□□□□□ -1.87
CTNND1-211ENST00000525821 SEC11CQ9BY50 192 aa3.38□□□□□ -1.87
CTNND1-211ENST00000525821 TRBV27A0A0K0K1C4 114 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 A0A1B0GXF2 115 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 D6R8Y8 96 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 PPBPP02775 128 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 S100PP25815 95 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 CTAG1AP78358 180 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 SMAGPQ0VAQ4 97 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 UNQ6190/PRO20217Q6UXQ8 127 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 IMMP2LQ96T52 175 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 TMEM242Q9NWH2 141 aa3.37□□□□□ -1.87
CTNND1-211ENST00000525821 TRBV24-1A0A075B6N3 115 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 TRAV13-1A0A0B4J241 112 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 LOC389332A0A1B0GUA5 103 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 C7orf77A4D0Y5 90 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 M0R2T5 61 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 TCAPO15273 167 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 ESDP10768 282 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 ZNF25P17030 456 aaPredicted RBP3.36□□□□□ -1.87
CTNND1-211ENST00000525821 ADCYAP1P18509 176 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 RAB5AP20339 215 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 ORMDL3Q8N138 153 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 PRELID3AQ96N28 172 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 CDC42SE2Q9NRR3 84 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 C6orf48Q9UBA6 75 aa3.36□□□□□ -1.87
CTNND1-211ENST00000525821 NPYP01303 97 aa3.35□□□□□ -1.87
CTNND1-211ENST00000525821 NDUFA5Q16718 116 aa3.35□□□□□ -1.87
CTNND1-211ENST00000525821 C10orf91Q5T1B1 145 aa3.35□□□□□ -1.87
CTNND1-211ENST00000525821 ORAOV1Q8WV07 137 aa3.35□□□□□ -1.87
CTNND1-211ENST00000525821 MRPL35Q9NZE8 188 aaKnown RBP3.35□□□□□ -1.87
CTNND1-211ENST00000525821 TRAV9-1A0A075B6T8 112 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 IGKV2D-26A0A0A0MRZ7 120 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 A0A0J9YXY3 114 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 C1orf196B1AJZ1 125 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 NDUFA1O15239 70 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 APOC3P02656 99 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 TLX1NBP0CAT3 122 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 RPL28P46779 137 aaKnown RBP3.34□□□□□ -1.87
CTNND1-211ENST00000525821 RHEBQ15382 184 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 MRPL52Q86TS9 123 aaKnown RBP3.34□□□□□ -1.87
CTNND1-211ENST00000525821 SMIM2Q9BVW6 85 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 MAP1LC3AQ9H492 121 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 LAMTOR2Q9Y2Q5 125 aa3.34□□□□□ -1.87
CTNND1-211ENST00000525821 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
CTNND1-211ENST00000525821 FLGP20930 4061 aaPredicted RBP3.33□□□□□ -1.88
CTNND1-211ENST00000525821 NUPR1O60356 82 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 BCE1O60756 84 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 SNAPINO95295 136 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 FABP9Q0Z7S8 132 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 COX19Q49B96 90 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 SVBPQ8N300 66 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 C3orf22Q8N5N4 141 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 Q8N8P6 123 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 TIMM21Q9BVV7 248 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 GNB1LQ9BYB4 327 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 UBE2D4Q9Y2X8 147 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 C22orf24Q9Y442 160 aa3.33□□□□□ -1.88
CTNND1-211ENST00000525821 G0S2P27469 103 aa3.32□□□□□ -1.88
CTNND1-211ENST00000525821 IFI27P40305 119 aaPredicted RBP3.32□□□□□ -1.88
CTNND1-211ENST00000525821 RPL39P62891 51 aaKnown RBP3.32□□□□□ -1.88
CTNND1-211ENST00000525821 FAM229BQ4G0N7 80 aa3.32□□□□□ -1.88
CTNND1-211ENST00000525821 ORMDL2Q53FV1 153 aa3.32□□□□□ -1.88
CTNND1-211ENST00000525821 C2orf82Q6UX34 121 aa3.32□□□□□ -1.88
CTNND1-211ENST00000525821 FP248Q71RG6 208 aaPredicted RBP3.32□□□□□ -1.88
CTNND1-211ENST00000525821 OR10D4PQ8NGN7 298 aa3.32□□□□□ -1.88
CTNND1-211ENST00000525821 NXT2Q9NPJ8 142 aaKnown RBP3.32□□□□□ -1.88
CTNND1-211ENST00000525821 TRAPPC1Q9Y5R8 145 aa3.32□□□□□ -1.88
CTNND1-211ENST00000525821 TGIF2-C20orf24A0A0A6YYL0 155 aa3.31□□□□□ -1.88
CTNND1-211ENST00000525821 KRTAP4-16G5E9R7 235 aaPredicted RBP3.31□□□□□ -1.88
CTNND1-211ENST00000525821 VAMP3Q15836 100 aa3.31□□□□□ -1.88
CTNND1-211ENST00000525821 Q6ZUT4 128 aa3.31□□□□□ -1.88
CTNND1-211ENST00000525821 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
CTNND1-211ENST00000525821 SLC7A5P1Q8MH63 180 aa3.31□□□□□ -1.88
CTNND1-211ENST00000525821 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
CTNND1-211ENST00000525821 SPANXA1Q9NS26 97 aa3.31□□□□□ -1.88
CTNND1-211ENST00000525821 CYSLTR1Q9Y271 337 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms