RNA–Protein interactions for RNA: ENST00000524324.5

CA1-223, Transcript of carbonic anhydrase 1, human

TSL 2

Gene CA1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CA1-223	ENST00000524324	CIRBP-AS1	Q8TBR5	109 aa		4.99	□□□□□ -1.61
CA1-223	ENST00000524324	TP73-AS1	Q9UF72	201 aa		4.99	□□□□□ -1.61
CA1-223	ENST00000524324	ERG28	Q9UKR5	140 aa		4.99	□□□□□ -1.61
CA1-223	ENST00000524324	KIAA1109	Q2LD37	5005 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	DNAH8	Q96JB1	4490 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	LRP1B	Q9NZR2	4599 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324		A0A087WYN8	130 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	MYMX	A0A1B0GTQ4	84 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	LOC105371267	A0A1B0GV96	52 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	NDUFC2-KCTD14	E9PQ53	114 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	TLX1NB	P0CAT3	122 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	LINC00158	P58513	81 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	CIRBP	Q14011	172 aa	Known RBP	4.98	□□□□□ -1.61
CA1-223	ENST00000524324	ADAMTSL4-AS1	Q5T5F5	129 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	SCX	Q7RTU7	201 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	DAND5	Q8N907	189 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	SPACA4	Q8TDM5	124 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324	BIRC6	Q9NR09	4857 aa		4.98	□□□□□ -1.61
CA1-223	ENST00000524324		A0A0J9YXY3	114 aa		4.97	□□□□□ -1.61
CA1-223	ENST00000524324	KRTAP9-7	A8MTY7	169 aa		4.97	□□□□□ -1.61
CA1-223	ENST00000524324	MEIG1	Q5JSS6	88 aa		4.97	□□□□□ -1.61
CA1-223	ENST00000524324	ZNF815P	A8K554	130 aa		4.96	□□□□□ -1.62
CA1-223	ENST00000524324	HERV-K104	P63124	156 aa		4.96	□□□□□ -1.62
CA1-223	ENST00000524324	PRR3	P79522	188 aa	Known RBP	4.96	□□□□□ -1.62
CA1-223	ENST00000524324	SERTAD4-AS1	Q5TG53	156 aa		4.96	□□□□□ -1.62
CA1-223	ENST00000524324	MIR7-3HG	Q8N6C7	128 aa		4.96	□□□□□ -1.62
CA1-223	ENST00000524324		Q8NDZ9	215 aa		4.96	□□□□□ -1.62
CA1-223	ENST00000524324	SND1-IT1	Q9HBX3	110 aa		4.96	□□□□□ -1.62
CA1-223	ENST00000524324	PAM16	Q9Y3D7	125 aa		4.96	□□□□□ -1.62
CA1-223	ENST00000524324	HSBP1L1	C9JCN9	74 aa		4.95	□□□□□ -1.62
CA1-223	ENST00000524324	CDK2AP2	O75956	126 aa		4.95	□□□□□ -1.62
CA1-223	ENST00000524324	NPC2	P61916	151 aa		4.95	□□□□□ -1.62
CA1-223	ENST00000524324	SPATA45	Q537H7	98 aa		4.95	□□□□□ -1.62
CA1-223	ENST00000524324	PHF5A	Q7RTV0	110 aa	Known RBP	4.95	□□□□□ -1.62
CA1-223	ENST00000524324	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.95	□□□□□ -1.62
CA1-223	ENST00000524324	KRTAP11-1	Q8IUC1	163 aa		4.95	□□□□□ -1.62
CA1-223	ENST00000524324	C14orf144	Q96I85	54 aa		4.95	□□□□□ -1.62
CA1-223	ENST00000524324	LITAF	Q99732	161 aa		4.95	□□□□□ -1.62
CA1-223	ENST00000524324	PLAC8	Q9NZF1	115 aa		4.95	□□□□□ -1.62
CA1-223	ENST00000524324	APOB	P04114	4563 aa	Known RBP	4.95	□□□□□ -1.62
CA1-223	ENST00000524324	COX17	Q14061	63 aa		4.94	□□□□□ -1.62
CA1-223	ENST00000524324	RYR1	P21817	5038 aa		4.94	□□□□□ -1.62
CA1-223	ENST00000524324	EPM2A	B3EWF7	344 aa		4.93	□□□□□ -1.62
CA1-223	ENST00000524324	SFTA2	Q6UW10	78 aa		4.93	□□□□□ -1.62
CA1-223	ENST00000524324	SOSTDC1	Q6X4U4	206 aa		4.93	□□□□□ -1.62
CA1-223	ENST00000524324	VAMP8	Q9BV40	100 aa		4.93	□□□□□ -1.62
CA1-223	ENST00000524324	KRTAP4-5	Q9BYR2	181 aa		4.93	□□□□□ -1.62
CA1-223	ENST00000524324	LINC00474	Q9P2X8	69 aa		4.93	□□□□□ -1.62
CA1-223	ENST00000524324	C22orf24	Q9Y442	160 aa		4.93	□□□□□ -1.62
CA1-223	ENST00000524324	SCGB1D4	Q6XE38	83 aa		4.92	□□□□□ -1.62
CA1-223	ENST00000524324	BOD1L2	Q8IYS8	172 aa		4.92	□□□□□ -1.62
CA1-223	ENST00000524324	KRTAP9-9	Q9BYP9	154 aa		4.92	□□□□□ -1.62
CA1-223	ENST00000524324	KRTAP9-4	Q9BYQ2	154 aa		4.92	□□□□□ -1.62
CA1-223	ENST00000524324	GAGE10	A6NGK3	116 aa		4.91	□□□□□ -1.62
CA1-223	ENST00000524324	RPL37AP8	A6NKH3	93 aa		4.91	□□□□□ -1.62
CA1-223	ENST00000524324	LINC00587	B1AMM8	73 aa		4.91	□□□□□ -1.62
CA1-223	ENST00000524324	COX8A	P10176	69 aa		4.91	□□□□□ -1.62
CA1-223	ENST00000524324	VPREB1	P12018	145 aa		4.91	□□□□□ -1.62
CA1-223	ENST00000524324	PKIG	Q9Y2B9	76 aa		4.91	□□□□□ -1.62
CA1-223	ENST00000524324		M0QXV9	152 aa		4.9	□□□□□ -1.63
CA1-223	ENST00000524324	TIMM17B	O60830	172 aa		4.9	□□□□□ -1.63
CA1-223	ENST00000524324	MUSTN1	Q8IVN3	82 aa		4.9	□□□□□ -1.63
CA1-223	ENST00000524324		Q8N1X5	172 aa		4.9	□□□□□ -1.63
CA1-223	ENST00000524324	LINC00308	Q8TCZ7	52 aa		4.9	□□□□□ -1.63
CA1-223	ENST00000524324	C7orf33	Q8WU49	177 aa		4.9	□□□□□ -1.63
CA1-223	ENST00000524324	LINC00167	Q96N53	147 aa		4.9	□□□□□ -1.63
CA1-223	ENST00000524324	NCR3	O14931	201 aa		4.89	□□□□□ -1.63
CA1-223	ENST00000524324	PRO1933	Q9H354	126 aa		4.89	□□□□□ -1.63
CA1-223	ENST00000524324	HSPG2	P98160	4391 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	IGLV5-37	A0A075B6J1	123 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	LOC107984156	A0A0G2JMH3	177 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	DLEU1	O43261	78 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	KRTAP10-4	P60372	401 aa	Predicted RBP	4.88	□□□□□ -1.63
CA1-223	ENST00000524324		Q5VSD8	79 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	SLC25A34	Q6PIV7	304 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	C2orf91	Q6ZV80	131 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	MRPL55	Q7Z7F7	128 aa	Known RBP	4.88	□□□□□ -1.63
CA1-223	ENST00000524324	ARL17A	Q8IVW1	177 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	SPANXD	Q9BXN6	97 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	SPANXC	Q9NY87	97 aa		4.88	□□□□□ -1.63
CA1-223	ENST00000524324	UBE2B	P63146	152 aa		4.87	□□□□□ -1.63
CA1-223	ENST00000524324	RPL24	P83731	157 aa	Known RBP	4.87	□□□□□ -1.63
CA1-223	ENST00000524324	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
CA1-223	ENST00000524324	NKAPP1	Q8N9T2	125 aa		4.87	□□□□□ -1.63
CA1-223	ENST00000524324	PSORS1C2	Q9UIG4	136 aa		4.87	□□□□□ -1.63
CA1-223	ENST00000524324	HERC2	O95714	4834 aa		4.87	□□□□□ -1.63
CA1-223	ENST00000524324	IGLV1-50	A0A075B6I6	118 aa		4.86	□□□□□ -1.63
CA1-223	ENST00000524324	IGKV2-28	A0A075B6P5	120 aa		4.86	□□□□□ -1.63
CA1-223	ENST00000524324	TMEM238	C9JI98	176 aa		4.86	□□□□□ -1.63
CA1-223	ENST00000524324		M0R378	163 aa		4.86	□□□□□ -1.63
CA1-223	ENST00000524324	IGKV2D-28	P01615	120 aa		4.86	□□□□□ -1.63
CA1-223	ENST00000524324	HNRNPA3	P51991	378 aa	Known RBP	4.86	□□□□□ -1.63
CA1-223	ENST00000524324	RPL37A	P61513	92 aa	Known RBP	4.86	□□□□□ -1.63
CA1-223	ENST00000524324	S100A12	P80511	92 aa		4.86	□□□□□ -1.63
CA1-223	ENST00000524324	LBH	Q53QV2	105 aa	Predicted RBP	4.86	□□□□□ -1.63
CA1-223	ENST00000524324	MIEN1	Q9BRT3	115 aa		4.86	□□□□□ -1.63
CA1-223	ENST00000524324	FAT1	Q14517	4588 aa		4.86	□□□□□ -1.63
CA1-223	ENST00000524324	SRRM2	Q9UQ35	2752 aa	Known RBP	4.85	□□□□□ -1.63
CA1-223	ENST00000524324	TRBV10-3	A0A0K0K1G6	114 aa		4.85	□□□□□ -1.63
CA1-223	ENST00000524324	C1orf137	Q5JT78	98 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms