RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 HSPB8Q9UJY1 196 aa11.47□□□□□ -0.57
FBXO28-205ENST00000523990 RPL28P46779 137 aaKnown RBP11.46□□□□□ -0.57
FBXO28-205ENST00000523990 RPL24P83731 157 aaKnown RBP11.46□□□□□ -0.57
FBXO28-205ENST00000523990 FABP4P15090 132 aa11.45□□□□□ -0.58
FBXO28-205ENST00000523990 LINC00158P58513 81 aa11.45□□□□□ -0.58
FBXO28-205ENST00000523990 PLNP26678 52 aa11.44□□□□□ -0.58
FBXO28-205ENST00000523990 KRTAP13-1Q8IUC0 172 aa11.44□□□□□ -0.58
FBXO28-205ENST00000523990 A0A0U1RRA0 63 aa11.43□□□□□ -0.58
FBXO28-205ENST00000523990 SMIM13P0DJ93 91 aa11.43□□□□□ -0.58
FBXO28-205ENST00000523990 TSPEAR-AS2P59090 65 aa11.43□□□□□ -0.58
FBXO28-205ENST00000523990 HERV-K104P63124 156 aa11.43□□□□□ -0.58
FBXO28-205ENST00000523990 NDUFA12Q9UI09 145 aa11.43□□□□□ -0.58
FBXO28-205ENST00000523990 HIST1H2BKO60814 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST1H2BJP06899 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST1H2BOP23527 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST1H2BBP33778 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST1H2BDP58876 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST1H2BCP62807 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST2H2BEQ16778 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 MEIG1Q5JSS6 88 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST1H2BHQ93079 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST1H2BNQ99877 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 HIST1H2BMQ99879 126 aa11.42□□□□□ -0.58
FBXO28-205ENST00000523990 DPM2O94777 84 aa11.41□□□□□ -0.58
FBXO28-205ENST00000523990 RPL13AP40429 203 aaKnown RBP11.41□□□□□ -0.58
FBXO28-205ENST00000523990 PMCHL2Q9BQD1 86 aa11.41□□□□□ -0.58
FBXO28-205ENST00000523990 LEPROTO15243 131 aa11.4□□□□□ -0.58
FBXO28-205ENST00000523990 UBE2AP49459 152 aa11.4□□□□□ -0.58
FBXO28-205ENST00000523990 TMEM126AQ9H061 195 aa11.4□□□□□ -0.58
FBXO28-205ENST00000523990 MYMXA0A1B0GTQ4 84 aa11.39□□□□□ -0.59
FBXO28-205ENST00000523990 TMEM238C9JI98 176 aa11.39□□□□□ -0.59
FBXO28-205ENST00000523990 IGKCP01834 107 aa11.39□□□□□ -0.59
FBXO28-205ENST00000523990 MIR7-3HGQ8N6C7 128 aa11.39□□□□□ -0.59
FBXO28-205ENST00000523990 MAP1LC3CQ9BXW4 147 aa11.39□□□□□ -0.59
FBXO28-205ENST00000523990 LPAP08519 4548 aa11.39□□□□□ -0.59
FBXO28-205ENST00000523990 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
FBXO28-205ENST00000523990 LINC00587B1AMM8 73 aa11.37□□□□□ -0.59
FBXO28-205ENST00000523990 M0R378 163 aa11.37□□□□□ -0.59
FBXO28-205ENST00000523990 J3QQQ9 107 aa11.36□□□□□ -0.59
FBXO28-205ENST00000523990 HERVK_113P61574 105 aa11.36□□□□□ -0.59
FBXO28-205ENST00000523990 A0A087X002 238 aa11.35□□□□□ -0.59
FBXO28-205ENST00000523990 PRLHP81277 87 aa11.35□□□□□ -0.59
FBXO28-205ENST00000523990 BOD1L2Q8IYS8 172 aa11.35□□□□□ -0.59
FBXO28-205ENST00000523990 FAM19A1Q7Z5A9 133 aa11.35□□□□□ -0.59
FBXO28-205ENST00000523990 NMUP48645 174 aa11.33□□□□□ -0.6
FBXO28-205ENST00000523990 SYS1-DBNDD2H3BUS1 97 aa11.32□□□□□ -0.6
FBXO28-205ENST00000523990 IGKV2D-26A0A0A0MRZ7 120 aa11.31□□□□□ -0.6
FBXO28-205ENST00000523990 NCR3O14931 201 aa11.31□□□□□ -0.6
FBXO28-205ENST00000523990 LGALS3P17931 250 aaKnown RBP11.31□□□□□ -0.6
FBXO28-205ENST00000523990 DAND5Q8N907 189 aa11.31□□□□□ -0.6
FBXO28-205ENST00000523990 S100A6P06703 90 aa11.3□□□□□ -0.6
FBXO28-205ENST00000523990 CRYGAP11844 174 aa11.3□□□□□ -0.6
FBXO28-205ENST00000523990 ANAPC11Q9NYG5 84 aa11.3□□□□□ -0.6
FBXO28-205ENST00000523990 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
FBXO28-205ENST00000523990 E9PLD3 99 aa11.29□□□□□ -0.6
FBXO28-205ENST00000523990 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
FBXO28-205ENST00000523990 PRYO14603 147 aa11.28□□□□□ -0.6
FBXO28-205ENST00000523990 TMA7Q9Y2S6 64 aaKnown RBP11.28□□□□□ -0.6
FBXO28-205ENST00000523990 FAM229BQ4G0N7 80 aa11.27□□□□□ -0.6
FBXO28-205ENST00000523990 COA6Q5JTJ3 125 aaKnown RBP11.27□□□□□ -0.6
FBXO28-205ENST00000523990 LINC01545Q5VT33 79 aa11.27□□□□□ -0.6
FBXO28-205ENST00000523990 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
FBXO28-205ENST00000523990 TYMSOSQ8TAI1 123 aa11.26□□□□□ -0.61
FBXO28-205ENST00000523990 SPRR1AP35321 89 aa11.26□□□□□ -0.61
FBXO28-205ENST00000523990 PET117Q6UWS5 81 aa11.26□□□□□ -0.61
FBXO28-205ENST00000523990 KCNQ1DNQ9H478 68 aa11.26□□□□□ -0.61
FBXO28-205ENST00000523990 TRBV10-3A0A0K0K1G6 114 aa11.25□□□□□ -0.61
FBXO28-205ENST00000523990 HIGD2AQ9BW72 106 aa11.25□□□□□ -0.61
FBXO28-205ENST00000523990 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
FBXO28-205ENST00000523990 LINC00337Q8N6G1 96 aa11.24□□□□□ -0.61
FBXO28-205ENST00000523990 KRTAP4-16G5E9R7 235 aaPredicted RBP11.23□□□□□ -0.61
FBXO28-205ENST00000523990 C3orf79P0CE67 100 aa11.23□□□□□ -0.61
FBXO28-205ENST00000523990 MIEN1Q9BRT3 115 aa11.23□□□□□ -0.61
FBXO28-205ENST00000523990 TRBV10-2A0A0K0K1G8 114 aa11.22□□□□□ -0.61
FBXO28-205ENST00000523990 SPANXB1Q9NS25 103 aaPredicted RBP11.21□□□□□ -0.61
FBXO28-205ENST00000523990 RNF213Q63HN8 5207 aa11.2□□□□□ -0.62
FBXO28-205ENST00000523990 NDUFC2O95298 119 aa11.2□□□□□ -0.62
FBXO28-205ENST00000523990 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
FBXO28-205ENST00000523990 SOSTDC1Q6X4U4 206 aa11.2□□□□□ -0.62
FBXO28-205ENST00000523990 ETDCA0A1B0GVM5 59 aa11.18□□□□□ -0.62
FBXO28-205ENST00000523990 EIF4EBP3O60516 100 aaPredicted RBP11.18□□□□□ -0.62
FBXO28-205ENST00000523990 DDTP30046 118 aa11.18□□□□□ -0.62
FBXO28-205ENST00000523990 TSPAN13O95857 204 aa11.18□□□□□ -0.62
FBXO28-205ENST00000523990 S100A2P29034 98 aa11.18□□□□□ -0.62
FBXO28-205ENST00000523990 KRTDAPP60985 99 aa11.18□□□□□ -0.62
FBXO28-205ENST00000523990 NPC2P61916 151 aa11.18□□□□□ -0.62
FBXO28-205ENST00000523990 S100A12P80511 92 aa11.18□□□□□ -0.62
FBXO28-205ENST00000523990 SPRR4Q96PI1 79 aa11.18□□□□□ -0.62
FBXO28-205ENST00000523990 LITAFQ99732 161 aa11.18□□□□□ -0.62
FBXO28-205ENST00000523990 C5orf52A6NGY3 159 aa11.17□□□□□ -0.62
FBXO28-205ENST00000523990 SNRPEP62304 92 aaKnown RBP11.17□□□□□ -0.62
FBXO28-205ENST00000523990 IGLV6-57P01721 117 aa11.15□□□□□ -0.62
FBXO28-205ENST00000523990 LINC00304Q8N9R0 145 aa11.15□□□□□ -0.62
FBXO28-205ENST00000523990 SMCR5Q8TEV8 140 aa11.15□□□□□ -0.62
FBXO28-205ENST00000523990 ZNF706Q9Y5V0 76 aaPredicted RBP11.15□□□□□ -0.62
FBXO28-205ENST00000523990 ZNF815PA8K554 130 aa11.14□□□□□ -0.63
FBXO28-205ENST00000523990 B5MCH6 92 aa11.14□□□□□ -0.63
FBXO28-205ENST00000523990 TIMM17BO60830 172 aa11.14□□□□□ -0.63
FBXO28-205ENST00000523990 PRR4Q16378 134 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms