RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 C22orf24Q9Y442 160 aa7.74□□□□□ -1.17
CCNC-216ENST00000523961 MYMXA0A1B0GTQ4 84 aa7.73□□□□□ -1.17
CCNC-216ENST00000523961 OXTP01178 125 aa7.73□□□□□ -1.17
CCNC-216ENST00000523961 C1orf137Q5JT78 98 aa7.73□□□□□ -1.17
CCNC-216ENST00000523961 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
CCNC-216ENST00000523961 LINC00587B1AMM8 73 aa7.72□□□□□ -1.17
CCNC-216ENST00000523961 LINC00158P58513 81 aa7.72□□□□□ -1.17
CCNC-216ENST00000523961 LINC01545Q5VT33 79 aa7.72□□□□□ -1.17
CCNC-216ENST00000523961 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
CCNC-216ENST00000523961 MRPL55Q7Z7F7 128 aaKnown RBP7.72□□□□□ -1.17
CCNC-216ENST00000523961 IGLV5-37A0A075B6J1 123 aa7.71□□□□□ -1.18
CCNC-216ENST00000523961 J3QQQ9 107 aa7.71□□□□□ -1.18
CCNC-216ENST00000523961 C3orf79P0CE67 100 aa7.71□□□□□ -1.18
CCNC-216ENST00000523961 SRSF9Q13242 221 aaKnown RBP eCLIP7.71□□□□□ -1.18
CCNC-216ENST00000523961 MEIG1Q5JSS6 88 aa7.71□□□□□ -1.18
CCNC-216ENST00000523961 KRTAP11-1Q8IUC1 163 aa7.71□□□□□ -1.18
CCNC-216ENST00000523961 DMBT1Q9UGM3 2413 aaPredicted RBP7.7□□□□□ -1.18
CCNC-216ENST00000523961 LGALS3P17931 250 aaKnown RBP7.7□□□□□ -1.18
CCNC-216ENST00000523961 NMUP48645 174 aa7.7□□□□□ -1.18
CCNC-216ENST00000523961 TSPEAR-AS2P59090 65 aa7.7□□□□□ -1.18
CCNC-216ENST00000523961 KRTDAPP60985 99 aa7.7□□□□□ -1.18
CCNC-216ENST00000523961 NKAPP1Q8N9T2 125 aa7.7□□□□□ -1.18
CCNC-216ENST00000523961 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
CCNC-216ENST00000523961 A0A0U1RRA0 63 aa7.69□□□□□ -1.18
CCNC-216ENST00000523961 IGLV7-43P04211 117 aa7.69□□□□□ -1.18
CCNC-216ENST00000523961 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
CCNC-216ENST00000523961 RPL24P83731 157 aaKnown RBP7.69□□□□□ -1.18
CCNC-216ENST00000523961 C20orf202A1L168 122 aa7.68□□□□□ -1.18
CCNC-216ENST00000523961 E9PLD3 99 aa7.68□□□□□ -1.18
CCNC-216ENST00000523961 LINC00167Q96N53 147 aa7.68□□□□□ -1.18
CCNC-216ENST00000523961 VPREB1P12018 145 aa7.67□□□□□ -1.18
CCNC-216ENST00000523961 REG3GQ6UW15 175 aa7.67□□□□□ -1.18
CCNC-216ENST00000523961 GAGE10A6NGK3 116 aa7.66□□□□□ -1.18
CCNC-216ENST00000523961 S100A6P06703 90 aa7.66□□□□□ -1.18
CCNC-216ENST00000523961 S100A2P29034 98 aa7.66□□□□□ -1.18
CCNC-216ENST00000523961 MIR7-3HGQ8N6C7 128 aa7.66□□□□□ -1.18
CCNC-216ENST00000523961 PKHD1L1Q86WI1 4243 aa7.65□□□□□ -1.18
CCNC-216ENST00000523961 RPL37AP8A6NKH3 93 aa7.65□□□□□ -1.18
CCNC-216ENST00000523961 AKR1D1P51857 326 aa7.65□□□□□ -1.18
CCNC-216ENST00000523961 HIST3H2BBQ8N257 126 aa7.65□□□□□ -1.18
CCNC-216ENST00000523961 DIRC1Q969H9 104 aa7.65□□□□□ -1.18
CCNC-216ENST00000523961 BOD1L2Q8IYS8 172 aa7.63□□□□□ -1.19
CCNC-216ENST00000523961 Q8NDZ9 215 aa7.63□□□□□ -1.19
CCNC-216ENST00000523961 HIST1H2BLQ99880 126 aa7.63□□□□□ -1.19
CCNC-216ENST00000523961 IGLV1-50A0A075B6I6 118 aa7.62□□□□□ -1.19
CCNC-216ENST00000523961 ZNF861PO60384 105 aa7.62□□□□□ -1.19
CCNC-216ENST00000523961 BCE1O60756 84 aa7.62□□□□□ -1.19
CCNC-216ENST00000523961 LINC01600Q96MT4 127 aa7.62□□□□□ -1.19
CCNC-216ENST00000523961 LRP1Q07954 4544 aaKnown RBP7.61□□□□□ -1.19
CCNC-216ENST00000523961 IGKV2-28A0A075B6P5 120 aa7.61□□□□□ -1.19
CCNC-216ENST00000523961 LOC107984156A0A0G2JMH3 177 aa7.61□□□□□ -1.19
CCNC-216ENST00000523961 A0A0J9YXY3 114 aa7.61□□□□□ -1.19
CCNC-216ENST00000523961 H0Y9J4 135 aa7.61□□□□□ -1.19
CCNC-216ENST00000523961 M0R378 163 aa7.61□□□□□ -1.19
CCNC-216ENST00000523961 IGKV2D-28P01615 120 aa7.61□□□□□ -1.19
CCNC-216ENST00000523961 ARL17AQ8IVW1 177 aa7.61□□□□□ -1.19
CCNC-216ENST00000523961 DAND5Q8N907 189 aa7.61□□□□□ -1.19
CCNC-216ENST00000523961 IGKV2D-26A0A0A0MRZ7 120 aa7.6□□□□□ -1.19
CCNC-216ENST00000523961 MT1HL1P0DM35 61 aa7.6□□□□□ -1.19
CCNC-216ENST00000523961 RPL28P46779 137 aaKnown RBP7.6□□□□□ -1.19
CCNC-216ENST00000523961 MIEN1Q9BRT3 115 aa7.6□□□□□ -1.19
CCNC-216ENST00000523961 ZNF815PA8K554 130 aa7.59□□□□□ -1.19
CCNC-216ENST00000523961 SNRPEP62304 92 aaKnown RBP7.59□□□□□ -1.19
CCNC-216ENST00000523961 ATOH7Q8N100 152 aa7.59□□□□□ -1.19
CCNC-216ENST00000523961 FAT3Q8TDW7 4589 aa7.58□□□□□ -1.2
CCNC-216ENST00000523961 TIMM17BO60830 172 aa7.58□□□□□ -1.2
CCNC-216ENST00000523961 UBE2AP49459 152 aa7.58□□□□□ -1.2
CCNC-216ENST00000523961 NCR3O14931 201 aa7.57□□□□□ -1.2
CCNC-216ENST00000523961 ANKRD39Q53RE8 183 aa7.57□□□□□ -1.2
CCNC-216ENST00000523961 ADAMTSL4-AS1Q5T5F5 129 aa7.57□□□□□ -1.2
CCNC-216ENST00000523961 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
CCNC-216ENST00000523961 TMEM126AQ9H061 195 aa7.57□□□□□ -1.2
CCNC-216ENST00000523961 TRBV10-2A0A0K0K1G8 114 aa7.56□□□□□ -1.2
CCNC-216ENST00000523961 C5orf52A6NGY3 159 aa7.56□□□□□ -1.2
CCNC-216ENST00000523961 TMEM238C9JI98 176 aa7.56□□□□□ -1.2
CCNC-216ENST00000523961 NDUFC2O95298 119 aa7.56□□□□□ -1.2
CCNC-216ENST00000523961 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
CCNC-216ENST00000523961 FAM19A1Q7Z5A9 133 aa7.55□□□□□ -1.2
CCNC-216ENST00000523961 KRTAP13-1Q8IUC0 172 aa7.55□□□□□ -1.2
CCNC-216ENST00000523961 LITAFQ99732 161 aa7.55□□□□□ -1.2
CCNC-216ENST00000523961 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
CCNC-216ENST00000523961 HSBP1L1C9JCN9 74 aa7.54□□□□□ -1.2
CCNC-216ENST00000523961 PRYO14603 147 aa7.54□□□□□ -1.2
CCNC-216ENST00000523961 NPC2P61916 151 aa7.54□□□□□ -1.2
CCNC-216ENST00000523961 S100A12P80511 92 aa7.54□□□□□ -1.2
CCNC-216ENST00000523961 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
CCNC-216ENST00000523961 SCGB1D4Q6XE38 83 aa7.54□□□□□ -1.2
CCNC-216ENST00000523961 TRBV10-3A0A0K0K1G6 114 aa7.53□□□□□ -1.2
CCNC-216ENST00000523961 KRTAP1-4P0C5Y4 121 aa7.53□□□□□ -1.2
CCNC-216ENST00000523961 LINC00308Q8TCZ7 52 aa7.53□□□□□ -1.2
CCNC-216ENST00000523961 KCNQ1DNQ9H478 68 aa7.53□□□□□ -1.2
CCNC-216ENST00000523961 HERC1Q15751 4861 aa7.52□□□□□ -1.2
CCNC-216ENST00000523961 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
CCNC-216ENST00000523961 DDTP30046 118 aa7.52□□□□□ -1.21
CCNC-216ENST00000523961 PRLHP81277 87 aa7.52□□□□□ -1.21
CCNC-216ENST00000523961 KRTAP4-8Q9BYQ9 185 aa7.52□□□□□ -1.21
CCNC-216ENST00000523961 SCGB1D1O95968 90 aa7.51□□□□□ -1.21
CCNC-216ENST00000523961 S100A7L2Q5SY68 101 aa7.51□□□□□ -1.21
CCNC-216ENST00000523961 PCP2Q8IVA1 136 aa7.51□□□□□ -1.21
CCNC-216ENST00000523961 PRR26Q8N8Z3 221 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms