RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
TRAPPC9-214ENST00000523777 MRPL55Q7Z7F7 128 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-214ENST00000523777 HIST3H2BBQ8N257 126 aa10.02□□□□□ -0.81
TRAPPC9-214ENST00000523777 NKAPP1Q8N9T2 125 aa10.02□□□□□ -0.81
TRAPPC9-214ENST00000523777 PSORS1C2Q9UIG4 136 aa10.02□□□□□ -0.81
TRAPPC9-214ENST00000523777 SMIM13P0DJ93 91 aa10□□□□□ -0.81
TRAPPC9-214ENST00000523777 TSPEAR-AS2P59090 65 aa10□□□□□ -0.81
TRAPPC9-214ENST00000523777 C1orf137Q5JT78 98 aa10□□□□□ -0.81
TRAPPC9-214ENST00000523777 SPINK6Q6UWN8 80 aa10□□□□□ -0.81
TRAPPC9-214ENST00000523777 HIST1H2BLQ99880 126 aa9.99□□□□□ -0.81
TRAPPC9-214ENST00000523777 FLG2Q5D862 2391 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-214ENST00000523777 OXTP01178 125 aa9.98□□□□□ -0.81
TRAPPC9-214ENST00000523777 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
TRAPPC9-214ENST00000523777 KRTAP29-1A8MX34 341 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-214ENST00000523777 HNRNPA3P51991 378 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-214ENST00000523777 SNRPEP62304 92 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-214ENST00000523777 MIR7-3HGQ8N6C7 128 aa9.97□□□□□ -0.81
TRAPPC9-214ENST00000523777 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
TRAPPC9-214ENST00000523777 IGLV7-43P04211 117 aa9.95□□□□□ -0.82
TRAPPC9-214ENST00000523777 VPREB1P12018 145 aa9.95□□□□□ -0.82
TRAPPC9-214ENST00000523777 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
TRAPPC9-214ENST00000523777 REG3GQ6UW15 175 aa9.94□□□□□ -0.82
TRAPPC9-214ENST00000523777 MIEN1Q9BRT3 115 aa9.94□□□□□ -0.82
TRAPPC9-214ENST00000523777 PKHD1L1Q86WI1 4243 aa9.93□□□□□ -0.82
TRAPPC9-214ENST00000523777 LOC107984156A0A0G2JMH3 177 aa9.93□□□□□ -0.82
TRAPPC9-214ENST00000523777 C5orf52A6NGY3 159 aa9.93□□□□□ -0.82
TRAPPC9-214ENST00000523777 J3QL48 77 aa9.93□□□□□ -0.82
TRAPPC9-214ENST00000523777 ARL17AQ8IVW1 177 aa9.93□□□□□ -0.82
TRAPPC9-214ENST00000523777 IGKV2D-26A0A0A0MRZ7 120 aa9.92□□□□□ -0.82
TRAPPC9-214ENST00000523777 A0A0J9YXY3 114 aa9.92□□□□□ -0.82
TRAPPC9-214ENST00000523777 KRTAP11-1Q8IUC1 163 aa9.92□□□□□ -0.82
TRAPPC9-214ENST00000523777 BOD1L2Q8IYS8 172 aa9.92□□□□□ -0.82
TRAPPC9-214ENST00000523777 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
TRAPPC9-214ENST00000523777 GAGE10A6NGK3 116 aa9.91□□□□□ -0.82
TRAPPC9-214ENST00000523777 RPL37AP8A6NKH3 93 aa9.91□□□□□ -0.82
TRAPPC9-214ENST00000523777 ZNF815PA8K554 130 aa9.91□□□□□ -0.82
TRAPPC9-214ENST00000523777 M0R378 163 aa9.91□□□□□ -0.82
TRAPPC9-214ENST00000523777 TIMM17BO60830 172 aa9.91□□□□□ -0.82
TRAPPC9-214ENST00000523777 HSBP1L1C9JCN9 74 aa9.9□□□□□ -0.82
TRAPPC9-214ENST00000523777 IGLV1-50A0A075B6I6 118 aa9.89□□□□□ -0.83
TRAPPC9-214ENST00000523777 BCE1O60756 84 aa9.89□□□□□ -0.83
TRAPPC9-214ENST00000523777 ATOH7Q8N100 152 aa9.89□□□□□ -0.83
TRAPPC9-214ENST00000523777 ZNF861PO60384 105 aa9.88□□□□□ -0.83
TRAPPC9-214ENST00000523777 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
TRAPPC9-214ENST00000523777 S100A12P80511 92 aa9.88□□□□□ -0.83
TRAPPC9-214ENST00000523777 MYCBP2O75592 4640 aa9.87□□□□□ -0.83
TRAPPC9-214ENST00000523777 IGKV2-28A0A075B6P5 120 aa9.87□□□□□ -0.83
TRAPPC9-214ENST00000523777 NDUFC2O95298 119 aa9.87□□□□□ -0.83
TRAPPC9-214ENST00000523777 IGKV2D-28P01615 120 aa9.87□□□□□ -0.83
TRAPPC9-214ENST00000523777 DAND5Q8N907 189 aa9.87□□□□□ -0.83
TRAPPC9-214ENST00000523777 TRBV10-2A0A0K0K1G8 114 aa9.86□□□□□ -0.83
TRAPPC9-214ENST00000523777 ANKRD39Q53RE8 183 aa9.86□□□□□ -0.83
TRAPPC9-214ENST00000523777 SCGB1D4Q6XE38 83 aa9.86□□□□□ -0.83
TRAPPC9-214ENST00000523777 COPS9Q8WXC6 57 aa9.86□□□□□ -0.83
TRAPPC9-214ENST00000523777 TMEM238C9JI98 176 aa9.85□□□□□ -0.83
TRAPPC9-214ENST00000523777 H0Y9J4 135 aa9.85□□□□□ -0.83
TRAPPC9-214ENST00000523777 SCGB1D1O95968 90 aa9.85□□□□□ -0.83
TRAPPC9-214ENST00000523777 Q8NDZ9 215 aa9.85□□□□□ -0.83
TRAPPC9-214ENST00000523777 SPANXB1Q9NS25 103 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC9-214ENST00000523777 ADAMTSL4-AS1Q5T5F5 129 aa9.84□□□□□ -0.83
TRAPPC9-214ENST00000523777 LINC01600Q96MT4 127 aa9.84□□□□□ -0.83
TRAPPC9-214ENST00000523777 DMBT1Q9UGM3 2413 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC9-214ENST00000523777 UBE2AP49459 152 aa9.83□□□□□ -0.84
TRAPPC9-214ENST00000523777 Q6ZVH6 145 aa9.83□□□□□ -0.84
TRAPPC9-214ENST00000523777 TMEM126AQ9H061 195 aa9.83□□□□□ -0.84
TRAPPC9-214ENST00000523777 CBY1Q9Y3M2 126 aa9.83□□□□□ -0.84
TRAPPC9-214ENST00000523777 PRYO14603 147 aa9.82□□□□□ -0.84
TRAPPC9-214ENST00000523777 NCR3O14931 201 aa9.82□□□□□ -0.84
TRAPPC9-214ENST00000523777 LITAFQ99732 161 aa9.82□□□□□ -0.84
TRAPPC9-214ENST00000523777 TTTY13Q9BZ97 58 aa9.82□□□□□ -0.84
TRAPPC9-214ENST00000523777 LINC00308Q8TCZ7 52 aa9.81□□□□□ -0.84
TRAPPC9-214ENST00000523777 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
TRAPPC9-214ENST00000523777 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
TRAPPC9-214ENST00000523777 PPDPFQ9H3Y8 114 aa9.8□□□□□ -0.84
TRAPPC9-214ENST00000523777 KCNQ1DNQ9H478 68 aa9.8□□□□□ -0.84
TRAPPC9-214ENST00000523777 IFITM1P13164 125 aa9.79□□□□□ -0.84
TRAPPC9-214ENST00000523777 DDTP30046 118 aa9.79□□□□□ -0.84
TRAPPC9-214ENST00000523777 NPC2P61916 151 aa9.79□□□□□ -0.84
TRAPPC9-214ENST00000523777 S100A7L2Q5SY68 101 aa9.79□□□□□ -0.84
TRAPPC9-214ENST00000523777 SOSTDC1Q6X4U4 206 aa9.79□□□□□ -0.84
TRAPPC9-214ENST00000523777 FAM19A1Q7Z5A9 133 aa9.79□□□□□ -0.84
TRAPPC9-214ENST00000523777 PCP2Q8IVA1 136 aa9.79□□□□□ -0.84
TRAPPC9-214ENST00000523777 FAT3Q8TDW7 4589 aa9.79□□□□□ -0.84
TRAPPC9-214ENST00000523777 TRBV10-3A0A0K0K1G6 114 aa9.78□□□□□ -0.84
TRAPPC9-214ENST00000523777 LINC00518Q8N0U6 118 aa9.78□□□□□ -0.84
TRAPPC9-214ENST00000523777 LRP1Q07954 4544 aaKnown RBP9.77□□□□□ -0.84
TRAPPC9-214ENST00000523777 KRTAP13-1Q8IUC0 172 aa9.77□□□□□ -0.85
TRAPPC9-214ENST00000523777 LINC00337Q8N6G1 96 aa9.77□□□□□ -0.85
TRAPPC9-214ENST00000523777 IGLV6-57P01721 117 aa9.75□□□□□ -0.85
TRAPPC9-214ENST00000523777 MT1HL1P0DM35 61 aa9.75□□□□□ -0.85
TRAPPC9-214ENST00000523777 SPRR1AP35321 89 aa9.75□□□□□ -0.85
TRAPPC9-214ENST00000523777 ETDCA0A1B0GVM5 59 aa9.74□□□□□ -0.85
TRAPPC9-214ENST00000523777 JOSD1Q15040 202 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-214ENST00000523777 EIF4EBP3O60516 100 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-214ENST00000523777 RPL13AP40429 203 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-214ENST00000523777 KRTAP10-8P60410 259 aa9.73□□□□□ -0.85
TRAPPC9-214ENST00000523777 PRLHP81277 87 aa9.73□□□□□ -0.85
TRAPPC9-214ENST00000523777 TRAV23DV6A0A075B6W5 121 aa9.71□□□□□ -0.86
TRAPPC9-214ENST00000523777 KRTAP1-4P0C5Y4 121 aa9.71□□□□□ -0.86
TRAPPC9-214ENST00000523777 COX8AP10176 69 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms