RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ZNF22P17026 224 aaPredicted RBP14.64□□□□□ -0.07
PVT1-219ENST00000523427 LINC01546A6NGU7 62 aa14.63□□□□□ -0.07
PVT1-219ENST00000523427 COX17Q14061 63 aa14.63□□□□□ -0.07
PVT1-219ENST00000523427 A0A0U1RRA0 63 aa14.61□□□□□ -0.07
PVT1-219ENST00000523427 ZNF706Q9Y5V0 76 aaPredicted RBP14.61□□□□□ -0.07
PVT1-219ENST00000523427 LINC00158P58513 81 aa14.6□□□□□ -0.07
PVT1-219ENST00000523427 LCE2DQ5TA82 110 aaPredicted RBP14.59□□□□□ -0.07
PVT1-219ENST00000523427 SEC61BP60468 96 aaKnown RBP14.58□□□□□ -0.08
PVT1-219ENST00000523427 FSIP2Q5CZC0 6907 aa14.57□□□□□ -0.08
PVT1-219ENST00000523427 TMEM170BQ5T4T1 132 aa14.55□□□□□ -0.08
PVT1-219ENST00000523427 SMCR5Q8TEV8 140 aa14.55□□□□□ -0.08
PVT1-219ENST00000523427 SPINK1P00995 79 aa14.54□□□□□ -0.08
PVT1-219ENST00000523427 FABP9Q0Z7S8 132 aa14.54□□□□□ -0.08
PVT1-219ENST00000523427 TRAV9-1A0A075B6T8 112 aa14.53□□□□□ -0.08
PVT1-219ENST00000523427 CRCT1Q9UGL9 99 aa14.53□□□□□ -0.08
PVT1-219ENST00000523427 C11orf86A6NJI1 115 aa14.52□□□□□ -0.09
PVT1-219ENST00000523427 S100PP25815 95 aa14.51□□□□□ -0.09
PVT1-219ENST00000523427 A0A096LNJ9 63 aa14.5□□□□□ -0.09
PVT1-219ENST00000523427 NCR3O14931 201 aa14.5□□□□□ -0.09
PVT1-219ENST00000523427 PMCHL1Q16048 86 aa14.5□□□□□ -0.09
PVT1-219ENST00000523427 BAGE3Q86Y29 109 aa14.5□□□□□ -0.09
PVT1-219ENST00000523427 PRYO14603 147 aa14.49□□□□□ -0.09
PVT1-219ENST00000523427 GAGE2AQ6NT46 116 aa14.49□□□□□ -0.09
PVT1-219ENST00000523427 SFTA2Q6UW10 78 aa14.49□□□□□ -0.09
PVT1-219ENST00000523427 NDUFA12Q9UI09 145 aa14.49□□□□□ -0.09
PVT1-219ENST00000523427 ETDCA0A1B0GVM5 59 aa14.48□□□□□ -0.09
PVT1-219ENST00000523427 ATP6V1G1O75348 118 aa14.48□□□□□ -0.09
PVT1-219ENST00000523427 BOD1L2Q8IYS8 172 aa14.48□□□□□ -0.09
PVT1-219ENST00000523427 IGLV9-49A0A0B4J1Y8 123 aa14.47□□□□□ -0.09
PVT1-219ENST00000523427 MOBPQ13875 183 aa14.46□□□□□ -0.09
PVT1-219ENST00000523427 SMIM13P0DJ93 91 aa14.45□□□□□ -0.1
PVT1-219ENST00000523427 HBDP02042 147 aa14.44□□□□□ -0.1
PVT1-219ENST00000523427 URB1-AS1Q96HZ7 61 aa14.43□□□□□ -0.1
PVT1-219ENST00000523427 SPRR1AP35321 89 aa14.42□□□□□ -0.1
PVT1-219ENST00000523427 Q8N377 158 aa14.42□□□□□ -0.1
PVT1-219ENST00000523427 LINC00614P0C842 121 aa14.41□□□□□ -0.1
PVT1-219ENST00000523427 COX19Q49B96 90 aa14.41□□□□□ -0.1
PVT1-219ENST00000523427 LINC00483Q53H64 154 aa14.41□□□□□ -0.1
PVT1-219ENST00000523427 MEIG1Q5JSS6 88 aa14.41□□□□□ -0.1
PVT1-219ENST00000523427 KCNQ1DNQ9H478 68 aa14.41□□□□□ -0.1
PVT1-219ENST00000523427 TRBV10-3A0A0K0K1G6 114 aa14.4□□□□□ -0.1
PVT1-219ENST00000523427 TMEM218A2RU14 115 aa14.4□□□□□ -0.1
PVT1-219ENST00000523427 CHTOPQ9Y3Y2 248 aaKnown RBP14.4□□□□□ -0.1
PVT1-219ENST00000523427 KRTAP4-16G5E9R7 235 aaPredicted RBP14.39□□□□□ -0.11
PVT1-219ENST00000523427 FAM19A2Q8N3H0 131 aa14.39□□□□□ -0.11
PVT1-219ENST00000523427 MIR7-3HGQ8N6C7 128 aa14.39□□□□□ -0.11
PVT1-219ENST00000523427 SEC11CQ9BY50 192 aa14.39□□□□□ -0.11
PVT1-219ENST00000523427 ERC2-IT1O76042 136 aa14.38□□□□□ -0.11
PVT1-219ENST00000523427 C18orf32Q8TCD1 76 aa14.38□□□□□ -0.11
PVT1-219ENST00000523427 SLC25A20O43772 301 aa14.36□□□□□ -0.11
PVT1-219ENST00000523427 TMEM223A0PJW6 202 aa14.35□□□□□ -0.11
PVT1-219ENST00000523427 XP32Q5T750 250 aa14.35□□□□□ -0.11
PVT1-219ENST00000523427 SSBP3-AS1Q7Z2R9 100 aa14.35□□□□□ -0.11
PVT1-219ENST00000523427 CLLU1Q5K131 121 aa14.34□□□□□ -0.11
PVT1-219ENST00000523427 B5MCH6 92 aa14.33□□□□□ -0.12
PVT1-219ENST00000523427 S100A12P80511 92 aa14.33□□□□□ -0.12
PVT1-219ENST00000523427 LCE2CQ5TA81 110 aa14.33□□□□□ -0.12
PVT1-219ENST00000523427 RPS29P62273 56 aaKnown RBP14.32□□□□□ -0.12
PVT1-219ENST00000523427 TRAPPC1Q9Y5R8 145 aa14.32□□□□□ -0.12
PVT1-219ENST00000523427 UQCC3Q6UW78 93 aa14.31□□□□□ -0.12
PVT1-219ENST00000523427 C9orf153Q5TBE3 101 aa14.29□□□□□ -0.12
PVT1-219ENST00000523427 RPS10P5Q9NQ39 176 aa14.29□□□□□ -0.12
PVT1-219ENST00000523427 Q9BRP9 147 aa14.27□□□□□ -0.13
PVT1-219ENST00000523427 DDTP30046 118 aa14.25□□□□□ -0.13
PVT1-219ENST00000523427 HERV-K104P63124 156 aa14.25□□□□□ -0.13
PVT1-219ENST00000523427 MAP1LC3CQ9BXW4 147 aa14.23□□□□□ -0.13
PVT1-219ENST00000523427 LINC00587B1AMM8 73 aa14.22□□□□□ -0.13
PVT1-219ENST00000523427 MT1HP80294 61 aa14.22□□□□□ -0.13
PVT1-219ENST00000523427 PCOTHQ58A44 107 aa14.22□□□□□ -0.13
PVT1-219ENST00000523427 IFI27L1Q96BM0 104 aa14.22□□□□□ -0.13
PVT1-219ENST00000523427 KRTAP19-2Q3LHN2 52 aa14.21□□□□□ -0.13
PVT1-219ENST00000523427 Q6ZRX8 168 aa14.21□□□□□ -0.13
PVT1-219ENST00000523427 IGLV8-61A0A075B6I0 122 aa14.2□□□□□ -0.14
PVT1-219ENST00000523427 TRAV12-1A0A0B4J245 112 aa14.2□□□□□ -0.14
PVT1-219ENST00000523427 MYMXA0A1B0GTQ4 84 aa14.2□□□□□ -0.14
PVT1-219ENST00000523427 C9orf92A6NGG3 77 aa14.17□□□□□ -0.14
PVT1-219ENST00000523427 RHEBQ15382 184 aa14.17□□□□□ -0.14
PVT1-219ENST00000523427 S100A7L2Q5SY68 101 aa14.15□□□□□ -0.14
PVT1-219ENST00000523427 HRCT1Q6UXD1 115 aa14.15□□□□□ -0.14
PVT1-219ENST00000523427 ST20-AS1Q8NBB2 130 aa14.15□□□□□ -0.14
PVT1-219ENST00000523427 TRBV10-2A0A0K0K1G8 114 aa14.14□□□□□ -0.15
PVT1-219ENST00000523427 H0Y8G0 127 aa14.14□□□□□ -0.15
PVT1-219ENST00000523427 CFC1BP0CG36 223 aa14.14□□□□□ -0.15
PVT1-219ENST00000523427 TSPEAR-AS2P59090 65 aa14.13□□□□□ -0.15
PVT1-219ENST00000523427 COMMD7Q86VX2 200 aa14.13□□□□□ -0.15
PVT1-219ENST00000523427 MIEN1Q9BRT3 115 aa14.12□□□□□ -0.15
PVT1-219ENST00000523427 JOSD1Q15040 202 aaPredicted RBP14.11□□□□□ -0.15
PVT1-219ENST00000523427 SPANXB1Q9NS25 103 aaPredicted RBP14.11□□□□□ -0.15
PVT1-219ENST00000523427 TRAV23DV6A0A075B6W5 121 aa14.09□□□□□ -0.15
PVT1-219ENST00000523427 LOC107984156A0A0G2JMH3 177 aa14.08□□□□□ -0.16
PVT1-219ENST00000523427 C10orf91Q5T1B1 145 aa14.08□□□□□ -0.16
PVT1-219ENST00000523427 ARL17AQ8IVW1 177 aa14.08□□□□□ -0.16
PVT1-219ENST00000523427 CHCHD1Q96BP2 118 aaKnown RBP14.08□□□□□ -0.16
PVT1-219ENST00000523427 IGLV6-57P01721 117 aa14.07□□□□□ -0.16
PVT1-219ENST00000523427 IFITM2Q01629 132 aa14.07□□□□□ -0.16
PVT1-219ENST00000523427 LEPROTO15243 131 aa14.06□□□□□ -0.16
PVT1-219ENST00000523427 ZNF73O43830 326 aaPredicted RBP14.05□□□□□ -0.16
PVT1-219ENST00000523427 NPC2P61916 151 aa14.05□□□□□ -0.16
PVT1-219ENST00000523427 LIMD2Q9BT23 127 aa14.05□□□□□ -0.16
PVT1-219ENST00000523427 M0R2T5 61 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms