RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 RPL24P83731 157 aaKnown RBP7.27□□□□□ -1.25
VEGFA-223ENST00000523125 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
VEGFA-223ENST00000523125 M0R378 163 aa7.26□□□□□ -1.25
VEGFA-223ENST00000523125 LINC00310P59036 64 aa7.26□□□□□ -1.25
VEGFA-223ENST00000523125 PRLHP81277 87 aa7.26□□□□□ -1.25
VEGFA-223ENST00000523125 TYMSOSQ8TAI1 123 aa7.26□□□□□ -1.25
VEGFA-223ENST00000523125 A0A0U1RRA0 63 aa7.25□□□□□ -1.25
VEGFA-223ENST00000523125 HSBP1O75506 76 aa7.25□□□□□ -1.25
VEGFA-223ENST00000523125 TSPAN13O95857 204 aa7.25□□□□□ -1.25
VEGFA-223ENST00000523125 TRGC2P03986 189 aa7.25□□□□□ -1.25
VEGFA-223ENST00000523125 LINC00158P58513 81 aa7.25□□□□□ -1.25
VEGFA-223ENST00000523125 PRR4Q16378 134 aa7.25□□□□□ -1.25
VEGFA-223ENST00000523125 FAM229BQ4G0N7 80 aa7.24□□□□□ -1.25
VEGFA-223ENST00000523125 FAM19A1Q7Z5A9 133 aa7.24□□□□□ -1.25
VEGFA-223ENST00000523125 SERF1AO75920 110 aa7.23□□□□□ -1.25
VEGFA-223ENST00000523125 SMIM13P0DJ93 91 aa7.23□□□□□ -1.25
VEGFA-223ENST00000523125 SLC7A5P1Q8MH63 180 aa7.22□□□□□ -1.25
VEGFA-223ENST00000523125 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
VEGFA-223ENST00000523125 HERV-K104P63124 156 aa7.21□□□□□ -1.26
VEGFA-223ENST00000523125 MIR7-3HGQ8N6C7 128 aa7.21□□□□□ -1.26
VEGFA-223ENST00000523125 H0Y8G0 127 aa7.2□□□□□ -1.26
VEGFA-223ENST00000523125 LEPROTL1O95214 131 aa7.2□□□□□ -1.26
VEGFA-223ENST00000523125 TSPEAR-AS2P59090 65 aa7.2□□□□□ -1.26
VEGFA-223ENST00000523125 BOD1L2Q8IYS8 172 aa7.2□□□□□ -1.26
VEGFA-223ENST00000523125 NDUFA12Q9UI09 145 aa7.2□□□□□ -1.26
VEGFA-223ENST00000523125 COLCA2A8K830 154 aa7.19□□□□□ -1.26
VEGFA-223ENST00000523125 MEIG1Q5JSS6 88 aa7.19□□□□□ -1.26
VEGFA-223ENST00000523125 IGKV2D-26A0A0A0MRZ7 120 aa7.18□□□□□ -1.26
VEGFA-223ENST00000523125 MYMXA0A1B0GTQ4 84 aa7.18□□□□□ -1.26
VEGFA-223ENST00000523125 ATP6V1G1O75348 118 aa7.18□□□□□ -1.26
VEGFA-223ENST00000523125 HIGD2AQ9BW72 106 aa7.18□□□□□ -1.26
VEGFA-223ENST00000523125 KRTAP4-16G5E9R7 235 aaPredicted RBP7.17□□□□□ -1.26
VEGFA-223ENST00000523125 NCR3O14931 201 aa7.17□□□□□ -1.26
VEGFA-223ENST00000523125 LEPROTO15243 131 aa7.17□□□□□ -1.26
VEGFA-223ENST00000523125 FABP4P15090 132 aa7.17□□□□□ -1.26
VEGFA-223ENST00000523125 PLNP26678 52 aa7.17□□□□□ -1.26
VEGFA-223ENST00000523125 SPRR1AP35321 89 aa7.17□□□□□ -1.26
VEGFA-223ENST00000523125 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
VEGFA-223ENST00000523125 LINC00304Q8N9R0 145 aa7.17□□□□□ -1.26
VEGFA-223ENST00000523125 KCNQ1DNQ9H478 68 aa7.17□□□□□ -1.26
VEGFA-223ENST00000523125 LOC107984156A0A0G2JMH3 177 aa7.16□□□□□ -1.26
VEGFA-223ENST00000523125 LINC00587B1AMM8 73 aa7.16□□□□□ -1.26
VEGFA-223ENST00000523125 PRYO14603 147 aa7.16□□□□□ -1.26
VEGFA-223ENST00000523125 ARL17AQ8IVW1 177 aa7.16□□□□□ -1.26
VEGFA-223ENST00000523125 SPRR4Q96PI1 79 aa7.16□□□□□ -1.26
VEGFA-223ENST00000523125 PMCHL2Q9BQD1 86 aa7.16□□□□□ -1.26
VEGFA-223ENST00000523125 HSPB8Q9UJY1 196 aa7.16□□□□□ -1.26
VEGFA-223ENST00000523125 DPM2O94777 84 aa7.15□□□□□ -1.26
VEGFA-223ENST00000523125 LINC00337Q8N6G1 96 aa7.15□□□□□ -1.26
VEGFA-223ENST00000523125 DAND5Q8N907 189 aa7.15□□□□□ -1.26
VEGFA-223ENST00000523125 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.26
VEGFA-223ENST00000523125 TRBV10-3A0A0K0K1G6 114 aa7.14□□□□□ -1.27
VEGFA-223ENST00000523125 J3QQQ9 107 aa7.14□□□□□ -1.27
VEGFA-223ENST00000523125 MAP1LC3CQ9BXW4 147 aa7.14□□□□□ -1.27
VEGFA-223ENST00000523125 MUC2Q02817 5179 aa7.14□□□□□ -1.27
VEGFA-223ENST00000523125 IGKCP01834 107 aa7.13□□□□□ -1.27
VEGFA-223ENST00000523125 CTAG1AP78358 180 aa7.12□□□□□ -1.27
VEGFA-223ENST00000523125 SMCR5Q8TEV8 140 aa7.12□□□□□ -1.27
VEGFA-223ENST00000523125 NMUP48645 174 aa7.11□□□□□ -1.27
VEGFA-223ENST00000523125 HERVK_113P61574 105 aa7.11□□□□□ -1.27
VEGFA-223ENST00000523125 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
VEGFA-223ENST00000523125 ETDCA0A1B0GVM5 59 aa7.1□□□□□ -1.27
VEGFA-223ENST00000523125 B5MCH6 92 aa7.1□□□□□ -1.27
VEGFA-223ENST00000523125 EIF4EBP3O60516 100 aaPredicted RBP7.1□□□□□ -1.27
VEGFA-223ENST00000523125 LGALS3P17931 250 aaKnown RBP7.1□□□□□ -1.27
VEGFA-223ENST00000523125 ZNF706Q9Y5V0 76 aaPredicted RBP7.1□□□□□ -1.27
VEGFA-223ENST00000523125 HIST1H2BKO60814 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST1H2BJP06899 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST1H2BOP23527 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 DDTP30046 118 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST1H2BBP33778 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST1H2BDP58876 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST1H2BCP62807 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST2H2BEQ16778 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.09□□□□□ -1.27
VEGFA-223ENST00000523125 ADAMTSL4-AS1Q5T5F5 129 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 SOSTDC1Q6X4U4 206 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST1H2BHQ93079 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST1H2BNQ99877 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 HIST1H2BMQ99879 126 aa7.09□□□□□ -1.27
VEGFA-223ENST00000523125 A0A0J9YXY3 114 aa7.08□□□□□ -1.28
VEGFA-223ENST00000523125 E9PLD3 99 aa7.08□□□□□ -1.28
VEGFA-223ENST00000523125 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
VEGFA-223ENST00000523125 NDUFC2O95298 119 aa7.08□□□□□ -1.28
VEGFA-223ENST00000523125 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
VEGFA-223ENST00000523125 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
VEGFA-223ENST00000523125 IGLV7-46A0A075B6I9 117 aa7.07□□□□□ -1.28
VEGFA-223ENST00000523125 SYS1-DBNDD2H3BUS1 97 aa7.07□□□□□ -1.28
VEGFA-223ENST00000523125 IGLV6-57P01721 117 aa7.07□□□□□ -1.28
VEGFA-223ENST00000523125 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
VEGFA-223ENST00000523125 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
VEGFA-223ENST00000523125 Q9BRP9 147 aa7.07□□□□□ -1.28
VEGFA-223ENST00000523125 SPANXB1Q9NS25 103 aaPredicted RBP7.07□□□□□ -1.28
VEGFA-223ENST00000523125 Q8NBF4 154 aa7.06□□□□□ -1.28
VEGFA-223ENST00000523125 MIEN1Q9BRT3 115 aa7.06□□□□□ -1.28
VEGFA-223ENST00000523125 S100A12P80511 92 aa7.05□□□□□ -1.28
VEGFA-223ENST00000523125 Q6ZRX8 168 aa7.05□□□□□ -1.28
VEGFA-223ENST00000523125 LITAFQ99732 161 aa7.05□□□□□ -1.28
VEGFA-223ENST00000523125 NPC2P61916 151 aa7.04□□□□□ -1.28
VEGFA-223ENST00000523125 LINC01545Q5VT33 79 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms