RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 WNK2Q9Y3S1 2297 aa5.34□□□□□ -1.55
HMGB4-204ENST00000522796 K7EQZ3 153 aa5.34□□□□□ -1.55
HMGB4-204ENST00000522796 LCE2DQ5TA82 110 aaPredicted RBP5.34□□□□□ -1.55
HMGB4-204ENST00000522796 TMEM105Q8N8V8 129 aa5.34□□□□□ -1.55
HMGB4-204ENST00000522796 ZZEF1O43149 2961 aa5.34□□□□□ -1.55
HMGB4-204ENST00000522796 IGKV3-20P01619 116 aa5.34□□□□□ -1.56
HMGB4-204ENST00000522796 ABCA4P78363 2273 aa5.34□□□□□ -1.56
HMGB4-204ENST00000522796 G3V318 75 aa5.33□□□□□ -1.56
HMGB4-204ENST00000522796 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
HMGB4-204ENST00000522796 DCHS1Q96JQ0 3298 aa5.33□□□□□ -1.56
HMGB4-204ENST00000522796 IGHV4-61A0A0C4DH41 118 aa5.33□□□□□ -1.56
HMGB4-204ENST00000522796 FAM186AA6NE01 2351 aa5.33□□□□□ -1.56
HMGB4-204ENST00000522796 IGKV2D-24A0A075B6R9 120 aa5.32□□□□□ -1.56
HMGB4-204ENST00000522796 IGLV1-40P01703 118 aa5.32□□□□□ -1.56
HMGB4-204ENST00000522796 U3KQA8 63 aa5.32□□□□□ -1.56
HMGB4-204ENST00000522796 IGHV4-28A0A0C4DH34 117 aa5.31□□□□□ -1.56
HMGB4-204ENST00000522796 ICE1Q9Y2F5 2266 aa5.31□□□□□ -1.56
HMGB4-204ENST00000522796 CACNA1EQ15878 2313 aa5.31□□□□□ -1.56
HMGB4-204ENST00000522796 DMXL1Q9Y485 3027 aa5.3□□□□□ -1.56
HMGB4-204ENST00000522796 IGLV5-48A0A075B6I7 105 aa5.3□□□□□ -1.56
HMGB4-204ENST00000522796 HTN1P15515 57 aa5.3□□□□□ -1.56
HMGB4-204ENST00000522796 KPRPQ5T749 579 aaPredicted RBP5.3□□□□□ -1.56
HMGB4-204ENST00000522796 AHCTF1Q8WYP5 2266 aa5.3□□□□□ -1.56
HMGB4-204ENST00000522796 ANKRD17O75179 2603 aaKnown RBP5.3□□□□□ -1.56
HMGB4-204ENST00000522796 IGLV1-50A0A075B6I6 118 aa5.3□□□□□ -1.56
HMGB4-204ENST00000522796 IGKV3OR2-268A0A0C4DH90 116 aa5.3□□□□□ -1.56
HMGB4-204ENST00000522796 SPATA8Q6RVD6 105 aa5.3□□□□□ -1.56
HMGB4-204ENST00000522796 PATE3B3GLJ2 98 aa5.29□□□□□ -1.56
HMGB4-204ENST00000522796 MINOS1-NBL1R4GNA1 71 aa5.29□□□□□ -1.56
HMGB4-204ENST00000522796 PLA2G2CQ5R387 149 aa5.29□□□□□ -1.56
HMGB4-204ENST00000522796 FREM2Q5SZK8 3169 aa5.29□□□□□ -1.56
HMGB4-204ENST00000522796 A8MWP4 228 aa5.28□□□□□ -1.56
HMGB4-204ENST00000522796 CACNA1GO43497 2377 aa5.28□□□□□ -1.56
HMGB4-204ENST00000522796 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
HMGB4-204ENST00000522796 C8orf17Q9NRJ1 99 aa5.27□□□□□ -1.57
HMGB4-204ENST00000522796 CUL9Q8IWT3 2517 aa5.27□□□□□ -1.57
HMGB4-204ENST00000522796 LINC00483Q53H64 154 aa5.26□□□□□ -1.57
HMGB4-204ENST00000522796 USMG5Q96IX5 58 aa5.26□□□□□ -1.57
HMGB4-204ENST00000522796 SPRR4Q96PI1 79 aa5.26□□□□□ -1.57
HMGB4-204ENST00000522796 Q8NBF4 154 aa5.26□□□□□ -1.57
HMGB4-204ENST00000522796 GPR179Q6PRD1 2367 aa5.25□□□□□ -1.57
HMGB4-204ENST00000522796 KRTAP29-1A8MX34 341 aaPredicted RBP5.25□□□□□ -1.57
HMGB4-204ENST00000522796 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
HMGB4-204ENST00000522796 ASPMQ8IZT6 3477 aa5.25□□□□□ -1.57
HMGB4-204ENST00000522796 IGLV5-37A0A075B6J1 123 aa5.25□□□□□ -1.57
HMGB4-204ENST00000522796 WFDC13Q8IUB5 93 aa5.25□□□□□ -1.57
HMGB4-204ENST00000522796 LINC00528Q8N1L1 170 aa5.25□□□□□ -1.57
HMGB4-204ENST00000522796 SPTBN1Q01082 2364 aaKnown RBP5.25□□□□□ -1.57
HMGB4-204ENST00000522796 ZNF292O60281 2723 aa5.25□□□□□ -1.57
HMGB4-204ENST00000522796 C20orf166-AS1Q96NR2 134 aa5.24□□□□□ -1.57
HMGB4-204ENST00000522796 H3BUA1 57 aa5.24□□□□□ -1.57
HMGB4-204ENST00000522796 MUC6Q6W4X9 2439 aa5.24□□□□□ -1.57
HMGB4-204ENST00000522796 MSMBP08118 114 aa5.23□□□□□ -1.57
HMGB4-204ENST00000522796 DEFB116Q30KQ4 102 aa5.23□□□□□ -1.57
HMGB4-204ENST00000522796 CACNA1HO95180 2353 aa5.23□□□□□ -1.57
HMGB4-204ENST00000522796 CYSRT1A8MQ03 144 aa5.23□□□□□ -1.57
HMGB4-204ENST00000522796 INSP01308 110 aa5.23□□□□□ -1.57
HMGB4-204ENST00000522796 HRES1P13985 223 aa5.23□□□□□ -1.57
HMGB4-204ENST00000522796 PRR34Q9NV39 138 aa5.23□□□□□ -1.57
HMGB4-204ENST00000522796 KALRNO60229 2985 aa5.22□□□□□ -1.57
HMGB4-204ENST00000522796 C5orf56Q8N8D9 126 aa5.22□□□□□ -1.57
HMGB4-204ENST00000522796 ZFHX4Q86UP3 3567 aa5.22□□□□□ -1.57
HMGB4-204ENST00000522796 WFDC10BQ8IUB3 73 aa5.22□□□□□ -1.57
HMGB4-204ENST00000522796 CELSR3Q9NYQ7 3312 aa5.21□□□□□ -1.57
HMGB4-204ENST00000522796 OTOGLQ3ZCN5 2332 aa5.21□□□□□ -1.58
HMGB4-204ENST00000522796 DEFB113Q30KQ7 82 aa5.21□□□□□ -1.58
HMGB4-204ENST00000522796 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
HMGB4-204ENST00000522796 C1orf137Q5JT78 98 aa5.21□□□□□ -1.58
HMGB4-204ENST00000522796 ZNF861PO60384 105 aa5.2□□□□□ -1.58
HMGB4-204ENST00000522796 CEP250Q9BV73 2442 aa5.2□□□□□ -1.58
HMGB4-204ENST00000522796 AKAP13Q12802 2813 aa5.19□□□□□ -1.58
HMGB4-204ENST00000522796 DEFB131BA0A096LNP1 70 aa5.19□□□□□ -1.58
HMGB4-204ENST00000522796 EGFEM1PQ0D2K5 195 aa5.19□□□□□ -1.58
HMGB4-204ENST00000522796 Q8N377 158 aa5.19□□□□□ -1.58
HMGB4-204ENST00000522796 ZFHX2Q9C0A1 2572 aaPredicted RBP5.19□□□□□ -1.58
HMGB4-204ENST00000522796 K7ERS5 55 aa5.19□□□□□ -1.58
HMGB4-204ENST00000522796 TRGV1A0A0A0MS02 117 aa5.18□□□□□ -1.58
HMGB4-204ENST00000522796 A0A0J9YWU9 116 aa5.18□□□□□ -1.58
HMGB4-204ENST00000522796 EP300Q09472 2414 aaPredicted RBP5.18□□□□□ -1.58
HMGB4-204ENST00000522796 SPENQ96T58 3664 aaKnown RBP5.18□□□□□ -1.58
HMGB4-204ENST00000522796 C7orf33Q8WU49 177 aa5.18□□□□□ -1.58
HMGB4-204ENST00000522796 CASC10Q5T4H9 136 aa5.17□□□□□ -1.58
HMGB4-204ENST00000522796 A0A087WSZ3 146 aa5.17□□□□□ -1.58
HMGB4-204ENST00000522796 LYNX1G3V0Z9 82 aa5.16□□□□□ -1.58
HMGB4-204ENST00000522796 UQCR11O14957 56 aa5.16□□□□□ -1.58
HMGB4-204ENST00000522796 LYNX1P0DP58 116 aa5.16□□□□□ -1.58
HMGB4-204ENST00000522796 CSNK1G2-AS1Q8NCQ2 148 aa5.16□□□□□ -1.58
HMGB4-204ENST00000522796 LAMA5O15230 3695 aa5.16□□□□□ -1.58
HMGB4-204ENST00000522796 A0A1B0GUV1 79 aa5.16□□□□□ -1.58
HMGB4-204ENST00000522796 PCOTHQ58A44 107 aa5.16□□□□□ -1.58
HMGB4-204ENST00000522796 RPL37AP8A6NKH3 93 aa5.15□□□□□ -1.58
HMGB4-204ENST00000522796 PKDREJQ9NTG1 2253 aa5.15□□□□□ -1.58
HMGB4-204ENST00000522796 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.15□□□□□ -1.58
HMGB4-204ENST00000522796 GVINP1Q7Z2Y8 2422 aa5.15□□□□□ -1.59
HMGB4-204ENST00000522796 KRTAP4-16G5E9R7 235 aaPredicted RBP5.15□□□□□ -1.59
HMGB4-204ENST00000522796 GVQW2A0A096LPI5 108 aaPredicted RBP5.14□□□□□ -1.59
HMGB4-204ENST00000522796 DEFB105AQ8NG35 78 aa5.14□□□□□ -1.59
HMGB4-204ENST00000522796 A0A1B0GU69 56 aa5.14□□□□□ -1.59
HMGB4-204ENST00000522796 A8MUU9 505 aa5.14□□□□□ -1.59
HMGB4-204ENST00000522796 DNAH10OSP0CZ25 163 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms