RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
EXTL3-211ENST00000522698 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
EXTL3-211ENST00000522698 GAGE2DQ9UEU5 116 aa8.93□□□□□ -0.98
EXTL3-211ENST00000522698 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
EXTL3-211ENST00000522698 LINC00518Q8N0U6 118 aa8.92□□□□□ -0.98
EXTL3-211ENST00000522698 FAM30AQ9NZY2 134 aa8.92□□□□□ -0.98
EXTL3-211ENST00000522698 TMEM238C9JI98 176 aa8.91□□□□□ -0.98
EXTL3-211ENST00000522698 INAFM2P0DMQ5 153 aa8.91□□□□□ -0.98
EXTL3-211ENST00000522698 DAND5Q8N907 189 aa8.91□□□□□ -0.98
EXTL3-211ENST00000522698 SPANXDQ9BXN6 97 aa8.91□□□□□ -0.98
EXTL3-211ENST00000522698 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
EXTL3-211ENST00000522698 SPANXCQ9NY87 97 aa8.91□□□□□ -0.98
EXTL3-211ENST00000522698 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
EXTL3-211ENST00000522698 LOC107984156A0A0G2JMH3 177 aa8.9□□□□□ -0.98
EXTL3-211ENST00000522698 C2orf91Q6ZV80 131 aa8.9□□□□□ -0.98
EXTL3-211ENST00000522698 ARL17AQ8IVW1 177 aa8.9□□□□□ -0.98
EXTL3-211ENST00000522698 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
EXTL3-211ENST00000522698 HIGD1BQ9P298 99 aa8.9□□□□□ -0.98
EXTL3-211ENST00000522698 UQCR10Q9UDW1 63 aa8.89□□□□□ -0.99
EXTL3-211ENST00000522698 EIF4EBP3O60516 100 aaPredicted RBP8.88□□□□□ -0.99
EXTL3-211ENST00000522698 SOSTDC1Q6X4U4 206 aa8.88□□□□□ -0.99
EXTL3-211ENST00000522698 Q6ZVH6 145 aa8.88□□□□□ -0.99
EXTL3-211ENST00000522698 KRTAP7-1Q8IUC3 87 aa8.88□□□□□ -0.99
EXTL3-211ENST00000522698 PLA2G2DQ9UNK4 145 aa8.88□□□□□ -0.99
EXTL3-211ENST00000522698 LINC00308Q8TCZ7 52 aa8.87□□□□□ -0.99
EXTL3-211ENST00000522698 PRO1933Q9H354 126 aa8.87□□□□□ -0.99
EXTL3-211ENST00000522698 PPDPFQ9H3Y8 114 aa8.87□□□□□ -0.99
EXTL3-211ENST00000522698 A0A087WYN8 130 aa8.86□□□□□ -0.99
EXTL3-211ENST00000522698 A0A1W2PNN7 141 aa8.86□□□□□ -0.99
EXTL3-211ENST00000522698 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
EXTL3-211ENST00000522698 Q8NDZ9 215 aa8.86□□□□□ -0.99
EXTL3-211ENST00000522698 MIEN1Q9BRT3 115 aa8.86□□□□□ -0.99
EXTL3-211ENST00000522698 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
EXTL3-211ENST00000522698 IFITM1P13164 125 aa8.85□□□□□ -0.99
EXTL3-211ENST00000522698 XGP55808 180 aa8.85□□□□□ -0.99
EXTL3-211ENST00000522698 SERTAD4-AS1Q5TG53 156 aa8.85□□□□□ -0.99
EXTL3-211ENST00000522698 Q5VSD8 79 aa8.85□□□□□ -0.99
EXTL3-211ENST00000522698 MYCBP2O75592 4640 aa8.84□□□□□ -0.99
EXTL3-211ENST00000522698 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
EXTL3-211ENST00000522698 VPREB1P12018 145 aa8.84□□□□□ -0.99
EXTL3-211ENST00000522698 NPC2P61916 151 aa8.84□□□□□ -0.99
EXTL3-211ENST00000522698 SCXQ7RTU7 201 aa8.84□□□□□ -0.99
EXTL3-211ENST00000522698 CIRBP-AS1Q8TBR5 109 aa8.84□□□□□ -0.99
EXTL3-211ENST00000522698 VPS13BQ7Z7G8 4022 aa8.83□□□□□ -1
EXTL3-211ENST00000522698 SRSF9Q13242 221 aaKnown RBP eCLIP8.83□□□□□ -1
EXTL3-211ENST00000522698 FAM19A5Q7Z5A7 132 aaPredicted RBP8.83□□□□□ -1
EXTL3-211ENST00000522698 TSTD3H0UI37 97 aa8.82□□□□□ -1
EXTL3-211ENST00000522698 NDUFC2O95298 119 aa8.82□□□□□ -1
EXTL3-211ENST00000522698 MUSTN1Q8IVN3 82 aa8.82□□□□□ -1
EXTL3-211ENST00000522698 COPS9Q8WXC6 57 aa8.82□□□□□ -1
EXTL3-211ENST00000522698 DPH3Q96FX2 82 aa8.82□□□□□ -1
EXTL3-211ENST00000522698 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
EXTL3-211ENST00000522698 HNRNPA3P51991 378 aaKnown RBP8.81□□□□□ -1
EXTL3-211ENST00000522698 HAMPP81172 84 aa8.81□□□□□ -1
EXTL3-211ENST00000522698 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
EXTL3-211ENST00000522698 TAL2Q16559 108 aa8.81□□□□□ -1
EXTL3-211ENST00000522698 HIST1H4GQ99525 98 aa8.81□□□□□ -1
EXTL3-211ENST00000522698 C22orf24Q9Y442 160 aa8.8□□□□□ -1
EXTL3-211ENST00000522698 M0QXV9 152 aa8.79□□□□□ -1
EXTL3-211ENST00000522698 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
EXTL3-211ENST00000522698 PRR3P79522 188 aaKnown RBP8.78□□□□□ -1
EXTL3-211ENST00000522698 HSD52Q0P140 79 aa8.78□□□□□ -1
EXTL3-211ENST00000522698 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
EXTL3-211ENST00000522698 CEND1Q8N111 149 aa8.78□□□□□ -1
EXTL3-211ENST00000522698 NKAPP1Q8N9T2 125 aa8.78□□□□□ -1
EXTL3-211ENST00000522698 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
EXTL3-211ENST00000522698 TRBV10-2A0A0K0K1G8 114 aa8.77□□□□□ -1.01
EXTL3-211ENST00000522698 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
EXTL3-211ENST00000522698 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1.01
EXTL3-211ENST00000522698 A4D1N5 150 aa8.76□□□□□ -1.01
EXTL3-211ENST00000522698 M0R378 163 aa8.76□□□□□ -1.01
EXTL3-211ENST00000522698 NCR3O14931 201 aa8.76□□□□□ -1.01
EXTL3-211ENST00000522698 C7orf33Q8WU49 177 aa8.76□□□□□ -1.01
EXTL3-211ENST00000522698 LBHQ53QV2 105 aaPredicted RBP8.75□□□□□ -1.01
EXTL3-211ENST00000522698 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
EXTL3-211ENST00000522698 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
EXTL3-211ENST00000522698 FXYD2P54710 66 aa8.74□□□□□ -1.01
EXTL3-211ENST00000522698 GAGE10A6NGK3 116 aa8.73□□□□□ -1.01
EXTL3-211ENST00000522698 J3QL48 77 aa8.73□□□□□ -1.01
EXTL3-211ENST00000522698 DDTP30046 118 aa8.73□□□□□ -1.01
EXTL3-211ENST00000522698 CTAG1AP78358 180 aa8.73□□□□□ -1.01
EXTL3-211ENST00000522698 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
EXTL3-211ENST00000522698 LINC00337Q8N6G1 96 aa8.73□□□□□ -1.01
EXTL3-211ENST00000522698 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
EXTL3-211ENST00000522698 IGLV6-57P01721 117 aa8.72□□□□□ -1.01
EXTL3-211ENST00000522698 IGLV1-50A0A075B6I6 118 aa8.71□□□□□ -1.02
EXTL3-211ENST00000522698 TRBV10-3A0A0K0K1G6 114 aa8.71□□□□□ -1.02
EXTL3-211ENST00000522698 RPL37AP8A6NKH3 93 aa8.71□□□□□ -1.02
EXTL3-211ENST00000522698 TMEM238LA0A1B0GVL6 79 aa8.7□□□□□ -1.02
EXTL3-211ENST00000522698 A6NJY4 79 aa8.7□□□□□ -1.02
EXTL3-211ENST00000522698 CFC1BP0CG36 223 aa8.7□□□□□ -1.02
EXTL3-211ENST00000522698 CFC1P0CG37 223 aa8.7□□□□□ -1.02
EXTL3-211ENST00000522698 UBE2BP63146 152 aa8.7□□□□□ -1.02
EXTL3-211ENST00000522698 BVES-AS1Q5T3Y7 98 aa8.7□□□□□ -1.02
EXTL3-211ENST00000522698 TRAV13-2A0A0B4J235 113 aa8.69□□□□□ -1.02
EXTL3-211ENST00000522698 A0A0B4J2C4 111 aa8.69□□□□□ -1.02
EXTL3-211ENST00000522698 S100A7L2Q5SY68 101 aa8.69□□□□□ -1.02
EXTL3-211ENST00000522698 M0R143 59 aa8.68□□□□□ -1.02
EXTL3-211ENST00000522698 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
EXTL3-211ENST00000522698 TMEM126AQ9H061 195 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms