RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 LINC01549A6NIU2 74 aa8.8□□□□□ -1
TRAPPC9-213ENST00000522504 UBE2AP49459 152 aa8.8□□□□□ -1
TRAPPC9-213ENST00000522504 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
TRAPPC9-213ENST00000522504 SCGB3A1Q96QR1 104 aa8.8□□□□□ -1
TRAPPC9-213ENST00000522504 CXCL5P42830 114 aa8.79□□□□□ -1
TRAPPC9-213ENST00000522504 SEC11AP67812 179 aa8.79□□□□□ -1
TRAPPC9-213ENST00000522504 PDZD11Q5EBL8 140 aa8.79□□□□□ -1
TRAPPC9-213ENST00000522504 ERASQ7Z444 233 aa8.78□□□□□ -1
TRAPPC9-213ENST00000522504 COX7B2Q8TF08 81 aa8.78□□□□□ -1
TRAPPC9-213ENST00000522504 TIMM17AQ99595 171 aa8.78□□□□□ -1
TRAPPC9-213ENST00000522504 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
TRAPPC9-213ENST00000522504 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
TRAPPC9-213ENST00000522504 FABP4P15090 132 aa8.77□□□□□ -1.01
TRAPPC9-213ENST00000522504 PRLHP81277 87 aa8.77□□□□□ -1.01
TRAPPC9-213ENST00000522504 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
TRAPPC9-213ENST00000522504 ATP5LO75964 103 aa8.76□□□□□ -1.01
TRAPPC9-213ENST00000522504 LEPROTL1O95214 131 aa8.76□□□□□ -1.01
TRAPPC9-213ENST00000522504 SNRPEP62304 92 aaKnown RBP8.76□□□□□ -1.01
TRAPPC9-213ENST00000522504 IGKV2D-26A0A0A0MRZ7 120 aa8.75□□□□□ -1.01
TRAPPC9-213ENST00000522504 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
TRAPPC9-213ENST00000522504 PAPPA-AS1Q5QFB9 102 aa8.75□□□□□ -1.01
TRAPPC9-213ENST00000522504 HIST3H2BBQ8N257 126 aa8.75□□□□□ -1.01
TRAPPC9-213ENST00000522504 NKAPP1Q8N9T2 125 aa8.75□□□□□ -1.01
TRAPPC9-213ENST00000522504 TINCRA0A1B0GVN0 87 aa8.74□□□□□ -1.01
TRAPPC9-213ENST00000522504 TMEM238C9JI98 176 aa8.74□□□□□ -1.01
TRAPPC9-213ENST00000522504 S100A2P29034 98 aa8.74□□□□□ -1.01
TRAPPC9-213ENST00000522504 C3orf22Q8N5N4 141 aa8.74□□□□□ -1.01
TRAPPC9-213ENST00000522504 IFI27L1Q96BM0 104 aa8.74□□□□□ -1.01
TRAPPC9-213ENST00000522504 HSPB8Q9UJY1 196 aa8.74□□□□□ -1.01
TRAPPC9-213ENST00000522504 C5orf52A6NGY3 159 aa8.73□□□□□ -1.01
TRAPPC9-213ENST00000522504 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
TRAPPC9-213ENST00000522504 H0Y8G0 127 aa8.72□□□□□ -1.01
TRAPPC9-213ENST00000522504 Q8NDZ9 215 aa8.72□□□□□ -1.01
TRAPPC9-213ENST00000522504 FSIP2Q5CZC0 6907 aa8.71□□□□□ -1.01
TRAPPC9-213ENST00000522504 VPREB1P12018 145 aa8.71□□□□□ -1.02
TRAPPC9-213ENST00000522504 PMVKQ15126 192 aa8.71□□□□□ -1.02
TRAPPC9-213ENST00000522504 FAM19A1Q7Z5A9 133 aa8.71□□□□□ -1.02
TRAPPC9-213ENST00000522504 PLEKHB2Q96CS7 222 aa8.71□□□□□ -1.02
TRAPPC9-213ENST00000522504 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
TRAPPC9-213ENST00000522504 CST9LQ9H4G1 147 aa8.71□□□□□ -1.02
TRAPPC9-213ENST00000522504 M0R378 163 aa8.7□□□□□ -1.02
TRAPPC9-213ENST00000522504 HIST1H2BLQ99880 126 aa8.7□□□□□ -1.02
TRAPPC9-213ENST00000522504 MAP1LC3CQ9BXW4 147 aa8.7□□□□□ -1.02
TRAPPC9-213ENST00000522504 PFN2P35080 140 aa8.69□□□□□ -1.02
TRAPPC9-213ENST00000522504 CTAG1AP78358 180 aa8.68□□□□□ -1.02
TRAPPC9-213ENST00000522504 KRTAP4-1Q9BYQ7 146 aa8.68□□□□□ -1.02
TRAPPC9-213ENST00000522504 SND1-IT1Q9HBX3 110 aa8.68□□□□□ -1.02
TRAPPC9-213ENST00000522504 TRAV12-1A0A0B4J245 112 aa8.67□□□□□ -1.02
TRAPPC9-213ENST00000522504 C3orf79P0CE67 100 aa8.67□□□□□ -1.02
TRAPPC9-213ENST00000522504 KRTDAPP60985 99 aa8.67□□□□□ -1.02
TRAPPC9-213ENST00000522504 CHTOPQ9Y3Y2 248 aaKnown RBP8.67□□□□□ -1.02
TRAPPC9-213ENST00000522504 SYS1-DBNDD2H3BUS1 97 aa8.66□□□□□ -1.02
TRAPPC9-213ENST00000522504 IGLV5-39A0A0G2JS06 123 aa8.65□□□□□ -1.02
TRAPPC9-213ENST00000522504 KRTAP13-3Q3SY46 172 aa8.65□□□□□ -1.02
TRAPPC9-213ENST00000522504 PET117Q6UWS5 81 aa8.64□□□□□ -1.03
TRAPPC9-213ENST00000522504 HIGD2AQ9BW72 106 aa8.64□□□□□ -1.03
TRAPPC9-213ENST00000522504 ERG28Q9UKR5 140 aa8.64□□□□□ -1.03
TRAPPC9-213ENST00000522504 IGLC3P0DOY3 106 aa8.63□□□□□ -1.03
TRAPPC9-213ENST00000522504 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
TRAPPC9-213ENST00000522504 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
TRAPPC9-213ENST00000522504 H3BRM9 83 aa8.62□□□□□ -1.03
TRAPPC9-213ENST00000522504 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
TRAPPC9-213ENST00000522504 LCE2DQ5TA82 110 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC9-213ENST00000522504 SPAG11AQ6PDA7 123 aa8.62□□□□□ -1.03
TRAPPC9-213ENST00000522504 FP248Q71RG6 208 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC9-213ENST00000522504 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC9-213ENST00000522504 SPRR4Q96PI1 79 aa8.62□□□□□ -1.03
TRAPPC9-213ENST00000522504 C20orf202A1L168 122 aa8.61□□□□□ -1.03
TRAPPC9-213ENST00000522504 LINC01545Q5VT33 79 aa8.61□□□□□ -1.03
TRAPPC9-213ENST00000522504 DAND5Q8N907 189 aa8.61□□□□□ -1.03
TRAPPC9-213ENST00000522504 DPM2O94777 84 aa8.6□□□□□ -1.03
TRAPPC9-213ENST00000522504 IGKCP01834 107 aa8.6□□□□□ -1.03
TRAPPC9-213ENST00000522504 ZNF22P17026 224 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC9-213ENST00000522504 PLNP26678 52 aa8.6□□□□□ -1.03
TRAPPC9-213ENST00000522504 RPL24P83731 157 aaKnown RBP8.6□□□□□ -1.03
TRAPPC9-213ENST00000522504 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
TRAPPC9-213ENST00000522504 LINC00337Q8N6G1 96 aa8.59□□□□□ -1.03
TRAPPC9-213ENST00000522504 Q8NBF4 154 aa8.59□□□□□ -1.03
TRAPPC9-213ENST00000522504 LINC01547P58512 204 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC9-213ENST00000522504 COX17Q14061 63 aa8.58□□□□□ -1.04
TRAPPC9-213ENST00000522504 SCGB1D1O95968 90 aa8.56□□□□□ -1.04
TRAPPC9-213ENST00000522504 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
TRAPPC9-213ENST00000522504 CRCT1Q9UGL9 99 aa8.56□□□□□ -1.04
TRAPPC9-213ENST00000522504 AKR1D1P51857 326 aa8.55□□□□□ -1.04
TRAPPC9-213ENST00000522504 ATOH7Q8N100 152 aa8.55□□□□□ -1.04
TRAPPC9-213ENST00000522504 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
TRAPPC9-213ENST00000522504 HERVK_113P61574 105 aa8.53□□□□□ -1.04
TRAPPC9-213ENST00000522504 A0A0U1RRA0 63 aa8.52□□□□□ -1.05
TRAPPC9-213ENST00000522504 LINC00158P58513 81 aa8.52□□□□□ -1.05
TRAPPC9-213ENST00000522504 JOSD1Q15040 202 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC9-213ENST00000522504 LCE2CQ5TA81 110 aa8.52□□□□□ -1.05
TRAPPC9-213ENST00000522504 SMCR5Q8TEV8 140 aa8.52□□□□□ -1.05
TRAPPC9-213ENST00000522504 ZNF706Q9Y5V0 76 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC9-213ENST00000522504 KRTAP4-16G5E9R7 235 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC9-213ENST00000522504 SPINK1P00995 79 aa8.51□□□□□ -1.05
TRAPPC9-213ENST00000522504 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
TRAPPC9-213ENST00000522504 LOC105371267A0A1B0GV96 52 aa8.5□□□□□ -1.05
TRAPPC9-213ENST00000522504 SPRR1AP35321 89 aa8.5□□□□□ -1.05
TRAPPC9-213ENST00000522504 PRYO14603 147 aa8.49□□□□□ -1.05
TRAPPC9-213ENST00000522504 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms