RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 Q8IZM0 81 aa8.53□□□□□ -1.04
HMBOX1-209ENST00000522468 LOC105371267A0A1B0GV96 52 aa8.52□□□□□ -1.05
HMBOX1-209ENST00000522468 HSBP1L1C9JCN9 74 aa8.52□□□□□ -1.05
HMBOX1-209ENST00000522468 LEPROTO15243 131 aa8.52□□□□□ -1.05
HMBOX1-209ENST00000522468 PYY3Q5JQD4 70 aa8.52□□□□□ -1.05
HMBOX1-209ENST00000522468 PLEKHB2Q96CS7 222 aa8.52□□□□□ -1.05
HMBOX1-209ENST00000522468 E9PLD3 99 aa8.51□□□□□ -1.05
HMBOX1-209ENST00000522468 CKS1BP61024 79 aa8.51□□□□□ -1.05
HMBOX1-209ENST00000522468 DIRC1Q969H9 104 aa8.51□□□□□ -1.05
HMBOX1-209ENST00000522468 H0Y9J4 135 aa8.5□□□□□ -1.05
HMBOX1-209ENST00000522468 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
HMBOX1-209ENST00000522468 ANKRD39Q53RE8 183 aa8.5□□□□□ -1.05
HMBOX1-209ENST00000522468 PRR26Q8N8Z3 221 aa8.5□□□□□ -1.05
HMBOX1-209ENST00000522468 MUC2Q02817 5179 aa8.49□□□□□ -1.05
HMBOX1-209ENST00000522468 J3QQQ9 107 aa8.49□□□□□ -1.05
HMBOX1-209ENST00000522468 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
HMBOX1-209ENST00000522468 CXCL5P42830 114 aa8.49□□□□□ -1.05
HMBOX1-209ENST00000522468 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
HMBOX1-209ENST00000522468 FAM19A5Q7Z5A7 132 aaPredicted RBP8.49□□□□□ -1.05
HMBOX1-209ENST00000522468 TRBV30A0A0K0K1B3 111 aa8.48□□□□□ -1.05
HMBOX1-209ENST00000522468 GAGE2EQ4V326 116 aa8.48□□□□□ -1.05
HMBOX1-209ENST00000522468 GAGE2DQ9UEU5 116 aa8.48□□□□□ -1.05
HMBOX1-209ENST00000522468 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
HMBOX1-209ENST00000522468 NMUP48645 174 aa8.47□□□□□ -1.05
HMBOX1-209ENST00000522468 TSPEAR-AS2P59090 65 aa8.47□□□□□ -1.05
HMBOX1-209ENST00000522468 C9orf129Q5T035 196 aaKnown RBP8.47□□□□□ -1.05
HMBOX1-209ENST00000522468 VAMP8Q9BV40 100 aa8.47□□□□□ -1.05
HMBOX1-209ENST00000522468 NDUFA12Q9UI09 145 aa8.47□□□□□ -1.05
HMBOX1-209ENST00000522468 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.06
HMBOX1-209ENST00000522468 SFTA2Q6UW10 78 aa8.46□□□□□ -1.06
HMBOX1-209ENST00000522468 PAM16Q9Y3D7 125 aa8.46□□□□□ -1.06
HMBOX1-209ENST00000522468 IGLV1-50A0A075B6I6 118 aa8.45□□□□□ -1.06
HMBOX1-209ENST00000522468 MYMXA0A1B0GTQ4 84 aa8.45□□□□□ -1.06
HMBOX1-209ENST00000522468 M0QXV9 152 aa8.45□□□□□ -1.06
HMBOX1-209ENST00000522468 SPATA45Q537H7 98 aa8.45□□□□□ -1.06
HMBOX1-209ENST00000522468 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
HMBOX1-209ENST00000522468 S100A12P80511 92 aa8.44□□□□□ -1.06
HMBOX1-209ENST00000522468 SMIM6P0DI80 62 aa8.43□□□□□ -1.06
HMBOX1-209ENST00000522468 HERV-K104P63124 156 aa8.43□□□□□ -1.06
HMBOX1-209ENST00000522468 PCP2Q8IVA1 136 aa8.43□□□□□ -1.06
HMBOX1-209ENST00000522468 TTTY13Q9BZ97 58 aa8.43□□□□□ -1.06
HMBOX1-209ENST00000522468 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
HMBOX1-209ENST00000522468 UBE2BP63146 152 aa8.41□□□□□ -1.06
HMBOX1-209ENST00000522468 MEIG1Q5JSS6 88 aa8.41□□□□□ -1.06
HMBOX1-209ENST00000522468 PFN2P35080 140 aa8.4□□□□□ -1.06
HMBOX1-209ENST00000522468 C14orf144Q96I85 54 aa8.4□□□□□ -1.06
HMBOX1-209ENST00000522468 ERG28Q9UKR5 140 aa8.4□□□□□ -1.06
HMBOX1-209ENST00000522468 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
HMBOX1-209ENST00000522468 A0A0U1RRA0 63 aa8.39□□□□□ -1.07
HMBOX1-209ENST00000522468 LINC00587B1AMM8 73 aa8.39□□□□□ -1.07
HMBOX1-209ENST00000522468 COX8AP10176 69 aa8.39□□□□□ -1.07
HMBOX1-209ENST00000522468 LINC00158P58513 81 aa8.39□□□□□ -1.07
HMBOX1-209ENST00000522468 ZNF861PO60384 105 aa8.38□□□□□ -1.07
HMBOX1-209ENST00000522468 SMIM13P0DJ93 91 aa8.38□□□□□ -1.07
HMBOX1-209ENST00000522468 COX17Q14061 63 aa8.38□□□□□ -1.07
HMBOX1-209ENST00000522468 SCGB1D4Q6XE38 83 aa8.38□□□□□ -1.07
HMBOX1-209ENST00000522468 RPL13AP40429 203 aaKnown RBP8.37□□□□□ -1.07
HMBOX1-209ENST00000522468 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
HMBOX1-209ENST00000522468 C22orf24Q9Y442 160 aa8.37□□□□□ -1.07
HMBOX1-209ENST00000522468 SLC25A34Q6PIV7 304 aa8.36□□□□□ -1.07
HMBOX1-209ENST00000522468 C12orf57Q99622 126 aa8.36□□□□□ -1.07
HMBOX1-209ENST00000522468 XAGE1AQ9HD64 81 aa8.36□□□□□ -1.07
HMBOX1-209ENST00000522468 DLEU1O43261 78 aa8.35□□□□□ -1.07
HMBOX1-209ENST00000522468 TIMM17BO60830 172 aa8.34□□□□□ -1.07
HMBOX1-209ENST00000522468 TP73-AS1Q9UF72 201 aa8.34□□□□□ -1.07
HMBOX1-209ENST00000522468 TMEM238C9JI98 176 aa8.33□□□□□ -1.08
HMBOX1-209ENST00000522468 LINC00518Q8N0U6 118 aa8.33□□□□□ -1.08
HMBOX1-209ENST00000522468 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
HMBOX1-209ENST00000522468 DAND5Q8N907 189 aa8.33□□□□□ -1.08
HMBOX1-209ENST00000522468 LBHQ53QV2 105 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-209ENST00000522468 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
HMBOX1-209ENST00000522468 PRO1933Q9H354 126 aa8.32□□□□□ -1.08
HMBOX1-209ENST00000522468 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
HMBOX1-209ENST00000522468 A0A087X002 238 aa8.31□□□□□ -1.08
HMBOX1-209ENST00000522468 MRPL55Q7Z7F7 128 aaKnown RBP8.31□□□□□ -1.08
HMBOX1-209ENST00000522468 LITAFQ99732 161 aa8.31□□□□□ -1.08
HMBOX1-209ENST00000522468 UQCR10Q9UDW1 63 aa8.31□□□□□ -1.08
HMBOX1-209ENST00000522468 BCE1O60756 84 aa8.3□□□□□ -1.08
HMBOX1-209ENST00000522468 NPC2P61916 151 aa8.3□□□□□ -1.08
HMBOX1-209ENST00000522468 PRR4Q16378 134 aa8.3□□□□□ -1.08
HMBOX1-209ENST00000522468 MIEN1Q9BRT3 115 aa8.29□□□□□ -1.08
HMBOX1-209ENST00000522468 HIGD1BQ9P298 99 aa8.29□□□□□ -1.08
HMBOX1-209ENST00000522468 C2orf91Q6ZV80 131 aa8.28□□□□□ -1.08
HMBOX1-209ENST00000522468 Q6ZVH6 145 aa8.28□□□□□ -1.08
HMBOX1-209ENST00000522468 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
HMBOX1-209ENST00000522468 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
HMBOX1-209ENST00000522468 SPANXDQ9BXN6 97 aa8.28□□□□□ -1.08
HMBOX1-209ENST00000522468 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
HMBOX1-209ENST00000522468 SPANXCQ9NY87 97 aa8.28□□□□□ -1.08
HMBOX1-209ENST00000522468 IGLV5-37A0A075B6J1 123 aa8.27□□□□□ -1.09
HMBOX1-209ENST00000522468 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
HMBOX1-209ENST00000522468 RPL28P46779 137 aaKnown RBP8.27□□□□□ -1.09
HMBOX1-209ENST00000522468 LINC00308Q8TCZ7 52 aa8.27□□□□□ -1.09
HMBOX1-209ENST00000522468 HIST1H4GQ99525 98 aa8.27□□□□□ -1.09
HMBOX1-209ENST00000522468 FAT4Q6V0I7 4981 aa8.26□□□□□ -1.09
HMBOX1-209ENST00000522468 LOC107984156A0A0G2JMH3 177 aa8.26□□□□□ -1.09
HMBOX1-209ENST00000522468 IFITM1P13164 125 aa8.26□□□□□ -1.09
HMBOX1-209ENST00000522468 ARL17AQ8IVW1 177 aa8.26□□□□□ -1.09
HMBOX1-209ENST00000522468 COPS9Q8WXC6 57 aa8.26□□□□□ -1.09
HMBOX1-209ENST00000522468 MUC17Q685J3 4493 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms