RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 AMELXQ99217 191 aa4.55□□□□□ -1.68
TRAPPC9-212ENST00000521944 SMIM2Q9BVW6 85 aa4.55□□□□□ -1.68
TRAPPC9-212ENST00000521944 LINC00846Q9NV44 126 aa4.55□□□□□ -1.68
TRAPPC9-212ENST00000521944 PDE6DO43924 150 aa4.54□□□□□ -1.68
TRAPPC9-212ENST00000521944 IGLV6-57P01721 117 aa4.54□□□□□ -1.68
TRAPPC9-212ENST00000521944 LINC01551Q86U37 167 aa4.54□□□□□ -1.68
TRAPPC9-212ENST00000521944 KMT2DO14686 5537 aa4.53□□□□□ -1.68
TRAPPC9-212ENST00000521944 IFI27P40305 119 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC9-212ENST00000521944 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
TRAPPC9-212ENST00000521944 FAM104BQ5XKR9 115 aa4.53□□□□□ -1.68
TRAPPC9-212ENST00000521944 GAGE2AQ6NT46 116 aa4.53□□□□□ -1.68
TRAPPC9-212ENST00000521944 C2orf66Q6UXQ4 117 aa4.53□□□□□ -1.68
TRAPPC9-212ENST00000521944 TEX43Q6ZNM6 134 aa4.53□□□□□ -1.68
TRAPPC9-212ENST00000521944 ARPC5O15511 151 aa4.52□□□□□ -1.69
TRAPPC9-212ENST00000521944 ERC2-IT1O76042 136 aa4.52□□□□□ -1.69
TRAPPC9-212ENST00000521944 CXCL5P42830 114 aa4.52□□□□□ -1.69
TRAPPC9-212ENST00000521944 SMIM1B2RUZ4 78 aa4.51□□□□□ -1.69
TRAPPC9-212ENST00000521944 NPYP01303 97 aa4.51□□□□□ -1.69
TRAPPC9-212ENST00000521944 BORCS7Q96B45 105 aa4.51□□□□□ -1.69
TRAPPC9-212ENST00000521944 SND1-IT1Q9HBX3 110 aa4.51□□□□□ -1.69
TRAPPC9-212ENST00000521944 CHTOPQ9Y3Y2 248 aaKnown RBP4.51□□□□□ -1.69
TRAPPC9-212ENST00000521944 LINC00862A6NCI5 91 aa4.5□□□□□ -1.69
TRAPPC9-212ENST00000521944 LINC00299Q6ZSB3 139 aa4.5□□□□□ -1.69
TRAPPC9-212ENST00000521944 CKS2P33552 79 aa4.49□□□□□ -1.69
TRAPPC9-212ENST00000521944 SPRR1AP35321 89 aa4.49□□□□□ -1.69
TRAPPC9-212ENST00000521944 RAB14P61106 215 aa4.49□□□□□ -1.69
TRAPPC9-212ENST00000521944 COX7B2Q8TF08 81 aa4.49□□□□□ -1.69
TRAPPC9-212ENST00000521944 S100ZQ8WXG8 99 aa4.49□□□□□ -1.69
TRAPPC9-212ENST00000521944 C2orf88Q9BSF0 95 aa4.49□□□□□ -1.69
TRAPPC9-212ENST00000521944 VCX2Q9H322 139 aa4.49□□□□□ -1.69
TRAPPC9-212ENST00000521944 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
TRAPPC9-212ENST00000521944 IGIPA6NJ69 53 aa4.48□□□□□ -1.69
TRAPPC9-212ENST00000521944 D6R8Y8 96 aa4.48□□□□□ -1.69
TRAPPC9-212ENST00000521944 PFN2P35080 140 aa4.48□□□□□ -1.69
TRAPPC9-212ENST00000521944 HERVK_113P63121 156 aa4.48□□□□□ -1.69
TRAPPC9-212ENST00000521944 RIGQ13278 110 aa4.48□□□□□ -1.69
TRAPPC9-212ENST00000521944 AKAP14Q86UN6 197 aa4.48□□□□□ -1.69
TRAPPC9-212ENST00000521944 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
TRAPPC9-212ENST00000521944 SMLR1H3BR10 107 aa4.47□□□□□ -1.69
TRAPPC9-212ENST00000521944 PDZD11Q5EBL8 140 aa4.47□□□□□ -1.69
TRAPPC9-212ENST00000521944 RPL24P83731 157 aaKnown RBP4.46□□□□□ -1.7
TRAPPC9-212ENST00000521944 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
TRAPPC9-212ENST00000521944 RAB5AP20339 215 aa4.45□□□□□ -1.7
TRAPPC9-212ENST00000521944 V9GYV3 84 aa4.45□□□□□ -1.7
TRAPPC9-212ENST00000521944 IGLV5-45A0A087WSX0 123 aa4.44□□□□□ -1.7
TRAPPC9-212ENST00000521944 ZNF345Q14585 488 aa4.44□□□□□ -1.7
TRAPPC9-212ENST00000521944 HRCT1Q6UXD1 115 aa4.44□□□□□ -1.7
TRAPPC9-212ENST00000521944 Q9BRP9 147 aa4.44□□□□□ -1.7
TRAPPC9-212ENST00000521944 KCNQ1DNQ9H478 68 aa4.44□□□□□ -1.7
TRAPPC9-212ENST00000521944 LOC389332A0A1B0GUA5 103 aa4.43□□□□□ -1.7
TRAPPC9-212ENST00000521944 SPINK8P0C7L1 97 aa4.43□□□□□ -1.7
TRAPPC9-212ENST00000521944 PAPPA-AS1Q5QFB9 102 aa4.43□□□□□ -1.7
TRAPPC9-212ENST00000521944 C9orf153Q5TBE3 101 aa4.43□□□□□ -1.7
TRAPPC9-212ENST00000521944 OSTCQ9NRP0 149 aa4.43□□□□□ -1.7
TRAPPC9-212ENST00000521944 PRSS47A8MTI9 375 aa4.42□□□□□ -1.7
TRAPPC9-212ENST00000521944 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
TRAPPC9-212ENST00000521944 SEC11AP67812 179 aa4.42□□□□□ -1.7
TRAPPC9-212ENST00000521944 C1orf195Q5TG92 126 aa4.42□□□□□ -1.7
TRAPPC9-212ENST00000521944 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
TRAPPC9-212ENST00000521944 CYSLTR1Q9Y271 337 aa4.42□□□□□ -1.7
TRAPPC9-212ENST00000521944 C20orf202A1L168 122 aa4.41□□□□□ -1.7
TRAPPC9-212ENST00000521944 ATP5LO75964 103 aa4.41□□□□□ -1.7
TRAPPC9-212ENST00000521944 FAM74A3Q4VXF1 159 aa4.41□□□□□ -1.7
TRAPPC9-212ENST00000521944 LIMD2Q9BT23 127 aa4.41□□□□□ -1.7
TRAPPC9-212ENST00000521944 BATF3Q9NR55 127 aa4.41□□□□□ -1.7
TRAPPC9-212ENST00000521944 NAT8BQ9UHF3 227 aa4.41□□□□□ -1.7
TRAPPC9-212ENST00000521944 ERG28Q9UKR5 140 aa4.41□□□□□ -1.7
TRAPPC9-212ENST00000521944 TINCRA0A1B0GVN0 87 aa4.4□□□□□ -1.71
TRAPPC9-212ENST00000521944 TMEM250H0YL14 139 aa4.4□□□□□ -1.71
TRAPPC9-212ENST00000521944 ETDCA0A1B0GVM5 59 aa4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 A0A1B0GXF2 115 aa4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 SMIM27A0A1W2PRY6 76 aa4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 TEX46H3BTG2 121 aa4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 PPBPP02775 128 aa4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 LGALS3P17931 250 aaKnown RBP4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 TMEM136Q6ZRR5 245 aa4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 SMIM29Q86T20 159 aa4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 ZNF625Q96I27 306 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 PRELID3AQ96N28 172 aa4.39□□□□□ -1.71
TRAPPC9-212ENST00000521944 KANTRA0A1W2PQU2 76 aa4.38□□□□□ -1.71
TRAPPC9-212ENST00000521944 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
TRAPPC9-212ENST00000521944 TAGLN2P37802 199 aaKnown RBP4.38□□□□□ -1.71
TRAPPC9-212ENST00000521944 COX17Q14061 63 aa4.38□□□□□ -1.71
TRAPPC9-212ENST00000521944 ORMDL3Q8N138 153 aa4.38□□□□□ -1.71
TRAPPC9-212ENST00000521944 ST20-AS1Q8NBB2 130 aa4.38□□□□□ -1.71
TRAPPC9-212ENST00000521944 TRBV10-3A0A0K0K1G6 114 aa4.37□□□□□ -1.71
TRAPPC9-212ENST00000521944 HMSDA8MTL9 139 aa4.37□□□□□ -1.71
TRAPPC9-212ENST00000521944 ADCYAP1P18509 176 aa4.37□□□□□ -1.71
TRAPPC9-212ENST00000521944 Q8N8P6 123 aa4.37□□□□□ -1.71
TRAPPC9-212ENST00000521944 NDUFA13Q9P0J0 144 aa4.37□□□□□ -1.71
TRAPPC9-212ENST00000521944 A0A1B0GW15 77 aa4.36□□□□□ -1.71
TRAPPC9-212ENST00000521944 H7C2G1 150 aa4.36□□□□□ -1.71
TRAPPC9-212ENST00000521944 CEBPGP53567 150 aa4.36□□□□□ -1.71
TRAPPC9-212ENST00000521944 Q5XG85 94 aa4.36□□□□□ -1.71
TRAPPC9-212ENST00000521944 MRPL54Q6P161 138 aaKnown RBP4.36□□□□□ -1.71
TRAPPC9-212ENST00000521944 SMIM7Q9BQ49 75 aa4.36□□□□□ -1.71
TRAPPC9-212ENST00000521944 TRAV9-1A0A075B6T8 112 aa4.35□□□□□ -1.71
TRAPPC9-212ENST00000521944 NCR3O14931 201 aa4.35□□□□□ -1.71
TRAPPC9-212ENST00000521944 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-212ENST00000521944 Q6ZRX8 168 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms