RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PCSK5Q92824 1860 aa11.3□□□□□ -0.6
USP42-207ENST00000521713 LINC01556Q5JQF7 62 aa11.3□□□□□ -0.6
USP42-207ENST00000521713 SPINK6Q6UWN8 80 aa11.3□□□□□ -0.6
USP42-207ENST00000521713 A0A1B0GW54 56 aa11.29□□□□□ -0.6
USP42-207ENST00000521713 IGLV9-49A0A0B4J1Y8 123 aa11.29□□□□□ -0.6
USP42-207ENST00000521713 HCG22E2RYF7 251 aa11.28□□□□□ -0.6
USP42-207ENST00000521713 H0Y9P7 68 aa11.28□□□□□ -0.6
USP42-207ENST00000521713 X6R8D5 127 aa11.28□□□□□ -0.6
USP42-207ENST00000521713 MDFIQ99750 246 aa11.27□□□□□ -0.61
USP42-207ENST00000521713 MUC4Q99102 2169 aa11.26□□□□□ -0.61
USP42-207ENST00000521713 PRR3P79522 188 aaKnown RBP11.26□□□□□ -0.61
USP42-207ENST00000521713 C4orf26Q17RF5 130 aa11.25□□□□□ -0.61
USP42-207ENST00000521713 IGLV5-45A0A087WSX0 123 aa11.24□□□□□ -0.61
USP42-207ENST00000521713 LINC00315P59091 139 aa11.24□□□□□ -0.61
USP42-207ENST00000521713 DNAH12Q6ZR08 3092 aa11.23□□□□□ -0.61
USP42-207ENST00000521713 PCNTO95613 3336 aa11.23□□□□□ -0.61
USP42-207ENST00000521713 Q6ZRU5 148 aa11.23□□□□□ -0.61
USP42-207ENST00000521713 A0A096LNT2 108 aa11.22□□□□□ -0.61
USP42-207ENST00000521713 COL27A1Q8IZC6 1860 aaPredicted RBP11.22□□□□□ -0.61
USP42-207ENST00000521713 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
USP42-207ENST00000521713 IGHV3OR16-9A0A0B4J2B5 98 aa11.19□□□□□ -0.62
USP42-207ENST00000521713 H3BPC8 53 aa11.19□□□□□ -0.62
USP42-207ENST00000521713 LOC110117498A0A087WWA1 95 aa11.18□□□□□ -0.62
USP42-207ENST00000521713 SPATA3Q8NHX4 192 aa11.18□□□□□ -0.62
USP42-207ENST00000521713 Q8NAQ8 132 aa11.18□□□□□ -0.62
USP42-207ENST00000521713 A0A087WSZ3 146 aa11.17□□□□□ -0.62
USP42-207ENST00000521713 PRRC2CQ9Y520 2896 aaKnown RBP11.17□□□□□ -0.62
USP42-207ENST00000521713 PCOTHQ58A44 107 aa11.15□□□□□ -0.62
USP42-207ENST00000521713 C1orf64Q8NEQ6 169 aa11.15□□□□□ -0.63
USP42-207ENST00000521713 Q9BRP9 147 aa11.14□□□□□ -0.63
USP42-207ENST00000521713 CIRBP-AS1Q8TBR5 109 aa11.14□□□□□ -0.63
USP42-207ENST00000521713 SMIM29Q86T20 159 aa11.14□□□□□ -0.63
USP42-207ENST00000521713 FAM218AQ96MZ4 157 aa11.13□□□□□ -0.63
USP42-207ENST00000521713 WWC2-AS2Q96NR7 200 aa11.13□□□□□ -0.63
USP42-207ENST00000521713 TP53AIP1Q9HCN2 124 aa11.12□□□□□ -0.63
USP42-207ENST00000521713 ERC2-IT1O76042 136 aa11.12□□□□□ -0.63
USP42-207ENST00000521713 Q6ZQT0 140 aa11.12□□□□□ -0.63
USP42-207ENST00000521713 C22orf24Q9Y442 160 aa11.12□□□□□ -0.63
USP42-207ENST00000521713 IGHV6-1A0A0B4J1U7 121 aa11.11□□□□□ -0.63
USP42-207ENST00000521713 NBDYA0A0U1RRE5 68 aa11.09□□□□□ -0.63
USP42-207ENST00000521713 MGAM2Q2M2H8 2515 aa11.08□□□□□ -0.64
USP42-207ENST00000521713 A8MTW9 85 aa11.07□□□□□ -0.64
USP42-207ENST00000521713 HELZ2Q9BYK8 2649 aaKnown RBP11.06□□□□□ -0.64
USP42-207ENST00000521713 LINC00588Q9Y4M8 146 aa11.06□□□□□ -0.64
USP42-207ENST00000521713 PRLHP81277 87 aa11.04□□□□□ -0.64
USP42-207ENST00000521713 C6orf48Q9UBA6 75 aa11.04□□□□□ -0.64
USP42-207ENST00000521713 ELOF1P60002 83 aaKnown RBP11.03□□□□□ -0.64
USP42-207ENST00000521713 KIAA0087Q14695 138 aa11.03□□□□□ -0.64
USP42-207ENST00000521713 SMCR5Q8TEV8 140 aa11.03□□□□□ -0.64
USP42-207ENST00000521713 LITAFQ99732 161 aa11.03□□□□□ -0.64
USP42-207ENST00000521713 Q9UF83 564 aa11.03□□□□□ -0.64
USP42-207ENST00000521713 KRTAP1-3Q8IUG1 177 aa11.02□□□□□ -0.65
USP42-207ENST00000521713 K7EIL1 84 aa11.01□□□□□ -0.65
USP42-207ENST00000521713 USP24Q9UPU5 2620 aa11.01□□□□□ -0.65
USP42-207ENST00000521713 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
USP42-207ENST00000521713 A0A1B0GU69 56 aa11.01□□□□□ -0.65
USP42-207ENST00000521713 TM2D3Q9BRN9 247 aa11.01□□□□□ -0.65
USP42-207ENST00000521713 CYP4F30PQ9H0H9 118 aa11.01□□□□□ -0.65
USP42-207ENST00000521713 SPAG11AQ6PDA7 123 aa11□□□□□ -0.65
USP42-207ENST00000521713 CSNK1G2-AS1Q8NCQ2 148 aa11□□□□□ -0.65
USP42-207ENST00000521713 LINC00167Q96N53 147 aa11□□□□□ -0.65
USP42-207ENST00000521713 C19orf73Q9NVV2 129 aa11□□□□□ -0.65
USP42-207ENST00000521713 ACYP2P14621 99 aa11□□□□□ -0.65
USP42-207ENST00000521713 Q8NBF4 154 aa11□□□□□ -0.65
USP42-207ENST00000521713 DNAH10OSP0CZ25 163 aa11□□□□□ -0.65
USP42-207ENST00000521713 VPREB1P12018 145 aa10.99□□□□□ -0.65
USP42-207ENST00000521713 KLKP1Q107X0 134 aa10.98□□□□□ -0.65
USP42-207ENST00000521713 DEFB116Q30KQ4 102 aa10.98□□□□□ -0.65
USP42-207ENST00000521713 RTL8CO15255 209 aa10.97□□□□□ -0.65
USP42-207ENST00000521713 KRTAP10-11P60412 298 aa10.97□□□□□ -0.65
USP42-207ENST00000521713 GVQW2A0A096LPI5 108 aaPredicted RBP10.95□□□□□ -0.66
USP42-207ENST00000521713 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
USP42-207ENST00000521713 CHD7Q9P2D1 2997 aa10.95□□□□□ -0.66
USP42-207ENST00000521713 KRTAP1-1Q07627 177 aa10.94□□□□□ -0.66
USP42-207ENST00000521713 KRTAP10-3P60369 221 aa10.94□□□□□ -0.66
USP42-207ENST00000521713 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
USP42-207ENST00000521713 FLNAP21333 2647 aaKnown RBP10.94□□□□□ -0.66
USP42-207ENST00000521713 TRAV22A0A0B4J277 110 aa10.93□□□□□ -0.66
USP42-207ENST00000521713 C16orf90A8MZG2 172 aa10.93□□□□□ -0.66
USP42-207ENST00000521713 MAST4O15021 2626 aa10.91□□□□□ -0.66
USP42-207ENST00000521713 Q6ZRP5 223 aa10.9□□□□□ -0.66
USP42-207ENST00000521713 ITPR3Q14573 2671 aa10.9□□□□□ -0.66
USP42-207ENST00000521713 CD164Q04900 197 aa10.9□□□□□ -0.66
USP42-207ENST00000521713 ATRQ13535 2644 aa10.9□□□□□ -0.66
USP42-207ENST00000521713 Q6ZRX8 168 aa10.87□□□□□ -0.67
USP42-207ENST00000521713 SPINK1P00995 79 aa10.87□□□□□ -0.67
USP42-207ENST00000521713 CFAP46Q8IYW2 2715 aa10.87□□□□□ -0.67
USP42-207ENST00000521713 TRBV7-4A0A0J9YYF1 115 aa10.87□□□□□ -0.67
USP42-207ENST00000521713 PHF5AQ7RTV0 110 aaKnown RBP10.86□□□□□ -0.67
USP42-207ENST00000521713 GIG44P09565 113 aaPredicted RBP10.86□□□□□ -0.67
USP42-207ENST00000521713 CHD9Q3L8U1 2897 aa10.85□□□□□ -0.67
USP42-207ENST00000521713 LINC00336Q6ZUF6 198 aa10.84□□□□□ -0.67
USP42-207ENST00000521713 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
USP42-207ENST00000521713 LINC00476Q8WZB0 136 aa10.84□□□□□ -0.67
USP42-207ENST00000521713 IGLV6-57P01721 117 aa10.84□□□□□ -0.67
USP42-207ENST00000521713 MOBPQ13875 183 aa10.83□□□□□ -0.68
USP42-207ENST00000521713 ATP11AUNQ6ZP68 121 aa10.83□□□□□ -0.68
USP42-207ENST00000521713 A8MUN3 132 aa10.82□□□□□ -0.68
USP42-207ENST00000521713 WIPF1O43516 503 aa10.82□□□□□ -0.68
USP42-207ENST00000521713 RETNLBQ9BQ08 111 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms